jgi.p|Nanoce1779_2|597554, gene_6635 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|597554
Unique Namegene_6635
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:328484..333055 +

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Properties
Property NameValue
TranscriptId597640
ProteinId597554
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:328484..333055 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0008186RNA-dependent ATPase activity
GO:0015462ATPase-coupled protein transmembrane transporter activity
GO:0017116single-stranded DNA-dependent ATP-dependent DNA helicase activity
GO:0042623ATPase activity, coupled
GO:0042625ATPase coupled ion transmembrane transporter activity
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL029ncniL029Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03030NO06G03030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597554mRNA_6635-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597554mRNA_6635Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|597554

>mRNA_6635-protein ID=mRNA_6635-protein|Name=jgi.p|Nanoce1779_2|597554|organism=Nannochloropsis oceanica|type=polypeptide|length=1415bp
MASDAESMRRSPPPAAPPSSPAPSAPPPPPADLYEHLTPWQQLSFSFVIP
IIRYGTYKSLQQEDLLPVPEQDRAARVMERLEKEWAVELQTKQRPSLNRA
LYRTHRRAFYVSGVLLFIEYALMLAKPVVLRYLLSWLKGDVATEAEVGST
GHWCYGIGVALGLACLNFMQTLIHHRAFMLTIRTGWRLRTSVQGLLYKKI
LKLDSRWQSRVGTGQIVSTLANDTQRYEDCAPSIHFLWVAPLMAFAGLGL
LIMYVGIRPAAAGCVVTVGIIPLQVWCGRRVGHARRVTAERTDRRVRLLS
EVLSGIQTVKAFVWEAPFRASISTARALERESLGWAAEMRAITMGIFFVA
PTFAASVTFLTFWGLGNRMELPIVFAVMTLLQTLRECARWIPRSIEQVSE
AQVATRRVQSLLELPVVGEGRKERAKEDPLKAEESVVKVENVVEIHDSDF
SWTGEQKQEQGEDKHDGRTSYPMRAVFHLQHLSLSIKPGELLIVTGPVGS
GKSTLLDVILGEVSCVHGPGVQLWEGTKMAYCSQQSWIEVGTVRDNITFG
AAPSKQPTAMTTGTPATIITTSTSRSGSRSGSRSSNCGSTSIFKPVLDTK
RYMRALKACALNHDLGNLASGDLTEIGEMGVNLSGGQRARVALARAVYAD
ADLYLLDDVLSAVDAQVSKHIFHDCIRGLLLKEKKAVILVTHQLQYLPYA
TRVCLLDKEGEIVAPCAPLEELRVMVPDWKGLMQERLGGAAVAVEGRGKS
AQRGGEEEEIEDERDKEGREGESRSIIGVKDASDIEKSSDLVASSPALFQ
STCHVSAGYMVAEDRVQGHVHGDTYVNYLRSGGMGAGMGIILLLLMSQGV
QTLTDFWLKFWTASQDARSARDSAYYYPRTYAILVAVCVVLGLLRADLFF
RFALRASSSLHDQALEAVLAAPLAFFNSNQRGRILNKFAKDLDSADDLLP
YTLFDFLQSAGSCLAAVVVCCIAVPYLLLIVAPLLYFFRKYRREFVKSAR
EVKRLDAITRSPLFADVSSSLQGAKVIRAFRAETAMEQRFLRRLDENGKC
TFLFIVLSRYLGFRLDILCAWFLAVLCLMTVALHASLDPGMLGLSLTYAL
VLCGAFQWTVRQSAQTETLFTSVERLDFYTRLPSEQDEDEQSGVFPISDK
KIFGQLSPSWPRQGEILVRNLNVRYREDLPLVLTDINFVIRAGQKVGIVG
RTGSGKSSFLAALLRLNQIVGGDIVLDGISLPSLPRADARRCVAWIPQQP
DLFAGTLRLNLDPFLNHNDAELHAALENVHLSLPLDMPVAEGGANLSVGT
RQLLSLARAVLLRRKILLMDEATASVSFIEDKRIQATLRTAPCFQDCTTV
TIAHRIESIIMSDLILVFADGRCVEQGTPQVLMSRECSLFGALVREAQSG
ATHGDLAKKYIMKK*
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Synonyms
Publications