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Properties
| Property Name | Value |
|---|
| TranscriptId | 634797 |
| Track | FilteredModels2 |
| ProteinId | 634711 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_113 | supercontig | scaffold_113:608..4070 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_12095 ID=mRNA_12095|Name=jgi.p|Nanoce1779_2|634711|organism=Nannochloropsis oceanica|type=mRNA|length=1462bp
AGTCCCTCGCCATTCGCCCACAGAGAATCTCTCCTCTTCTCCCTTGAGCG
TCGTCGTTGTCGTGTACGCCATTCTAACCAATCTGTACACGACCCTTGTC
GCGGAGTCGGTCAAACTTTTGGAGGCAAAGCAATGGGGCGTGCCGGCATT
GGGTGTTCCTCGCCATCCCCCATCCCTCTCCAATTCTTTCACGTCAAGCA
TCTGTCGTCCAGGCATACATTCCTTTCTGCATTCCGTGTGCGCAAGACAT
GAGGCCTTTATTTGGGAGCAAGAACGGTGACAGAGAATGACGGCCGTGCC
CACACCTAACTTTGCTTTGGTGGTCACATGGTCCCTCAGGCCACCTAGCG
TTTACTCGCCTCGACCTCTGCCCTTCTTTACCTTCCAACACCTCGATACT
ACCAGTCCCCCCTGACATGAGCAATGTTCAGCCACCTGAGGACATGAAGG
ATTCGGAGCACCATTGCCGAGCGGGCCGGTTCACTTGTCGTCCTTGTTCA
TACGCCCTCCCGAAGGCTAGAAAAACCCATGTATCCCACGCACATACACA
CACCGAATAAAATTTCCCGTCCTTCTGATTCTCTTCCTTTCATTCCCCCA
ACCACAGACAGCTTTTTTCCACCTGGAGAGGGTCACGTGTGAGTAGGACC
TCAAGAAAGGAAAGCAAAGCGACGAGCCCCGTCCCCGCCCCGCTTTCCAG
CTAGACAGCCAAGGCACCTCAATCGCTCTACAGTTTTCCTCTTCTCCTTT
TCCCCCTCGTCCTCCCTCCTTCCTTTACCCTCACCCCTTTTCTTGTGCCT
CGATAACACGGGAAGGGGACGAGAGGGACGATGGCGATGAACTTTTTGCG
GAAAGCCTACGTCCCGACCAGCAACACTGACCGCGATGGGAGATCTCCCA
AAAGTTTGATCACAATAGCAGCATGCACGACATAGACGATGTGTCTTCTC
CCTTGGACAGTGAGATAGAGTCAATCCCCTCACCCACGGCTTCGGACATG
AGCGAGCTCGGCCAGGGGGGCCACGAACCCCAAGACGGCCCTGCGGACAT
GCCTGACCGAGATTTCCTCCACGCTAAGGGCGTAGCGGCGGCGTTTGCAG
GATACCCGGCAAAATCCGTATATCAGGAGGGAAACGGTTTTGATGCCGTT
CCCGATATCTCGGCGGAGCTCGATCACTCCACTGGCCCAAGCACGCCGGT
CAACTACAAGGAGGCCAAGAACCCCCAAGACTTCAAGTATCATCCTTCGC
GCAATTTCCTCATCGGCGTCTCCGTCATCAACATCATCTGTGGCATCCTG
TACATCTACTGGCGCTGCACCCGCTCCATGACCGGCGTGATGCACTCGTG
GTTTGCGTGGGTCTTTTTGTTCGGAGAGATCGTCATCACCCTCTCGGCGT
GGCAGTCCCACTGCTCCCGCTTCTTTCCCGTCAAGCGCACGCGCTGCACA
GTCGACGACCTG back to topprotein sequence of jgi.p|Nanoce1779_2|634711 >mRNA_12095-protein ID=mRNA_12095-protein|Name=jgi.p|Nanoce1779_2|634711|organism=Nannochloropsis oceanica|type=polypeptide|length=180bp
MHDIDDVSSPLDSEIESIPSPTASDMSELGQGGHEPQDGPADMPDRDFLH
AKGVAAAFAGYPAKSVYQEGNGFDAVPDISAELDHSTGPSTPVNYKEAKN
PQDFKYHPSRNFLIGVSVINIICGILYIYWRCTRSMTGVMHSWFAWVFLF
GEIVITLSAWQSHCSRFFPVKRTRCTVDDL back to topmRNA from alignment at scaffold_113:608..4070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12095 ID=mRNA_12095|Name=jgi.p|Nanoce1779_2|634711|organism=Nannochloropsis oceanica|type=mRNA|length=3463bp|location=Sequence derived from alignment at scaffold_113:608..4070- (Nannochloropsis oceanica)
AGTCCCTCGCCATTCGCCCACAGAGAATCTCTCCTCTTCTCCCTTGAGCG
TCGTCGTTGTCGTGTACGCCATTCTAACCAATCTGTACACGACCCTTGTC
GCGGAGTCGGTCAAACTTTTGGAGGCAAAGCAATGGGGCGTGCCGGCATT
GGGTGTTCCTCGCCATCCCCCATCCCTCTCCAATTCTTTCACGTCAAGCA
TCTGTCGTCCAGGCATACATTCCTTTCTGCATTCCGTGTGCGCAAGACAT
GAGGCCTTTATTTGGGAGCAAGAACGGTGACAGAGAATGACGGCCGTGCC
CACACCTAACTTTGCTTTGGTGGTCACATGGTCCCTCAGGCCACCTAGCG
TTTACTCGCCTCGACCTCTGCCCTTCTTTACCTTCCAACACCTCGATACT
ACCAGTCCCCCCTGACATGAGCAATGTTCAGCCACCTGAGGACATGAAGG
ATTCGGAGCACCATTGCCGAGCGGGCCGGTTCACTTGTCGTCCTTGTTCA
TACGCCCTCCCGAAGGCTAGAAAAACCCATGTATCCCACGCACATACACA
CACCGAATAAAATTTCCCGTCCTTCTGATTCTCTTCCTTTCATTCCCCCA
ACCACAGACAGCTTTTTTCCACCTGGAGAGGGTCACGTGTGAGTAGGACC
TCAAGAAAGGAAAGCAAAGCGACGAGCCCCGTCCCCGCCCCGCTTTCCAG
CTAGACAGCCAAGGCACCTCAATCGCTCTACAGTTTTCCTCTTCTCCTTT
TCCCCCTCGTCCTCCCTCCTTCCTTTACCCTCACCCCTTTTCTTGTGCCT
CGATAACACGGGAAGGGGACGAGAGGGACGATGGCGATGAACTTTTTGCG
GAAAGCCTACGTCCCGACCAGCAACACTGACCGCGATGGGTGCGTAATGA
GGAGGGAAGGAGGGAGGGAGGGAGGAAAGGGGAGGAGAGGAGATGGGACA
GAGGGAGGGGGCGAGGGAGGGAGGGAGGGAGGGAGGGGAGGAGAGGGGAG
GGATGAGAGGGGAGCGAGGGAAAGAGGGAGGGAGTGATGGAAGGGAGTGA
ATAAGCAGACCTCTCATTATGCCGCCACACACGCATACAAACCCACACAC
ACATGTATCTACACACACGTTCTCACCCTTTCGTACTCTTTTTCCTCCTT
GCCTCCCTCCATTGTCTTTGCCACCTTCCAGGGACGAGGATGACGACGCC
CTGCAGATGAATGAGTCGGACATATTTAGGCAATGAACCAGCTGCAGCAC
GATGACTCGATGCCGCAGGAGACACGGGATCTAATAAATCAGGTAGGGAG
GTAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGAGA
GGGCGGTAAATGAGCTTTGGGAAGGGAGTTTCCGCCTGGTGGGACCGGTA
GGGCCGGGGAGGGAGGGAGGGGAGCAGGAGGAGGAGGAAGAAGAAGAGTG
CAAAGGCGAATATCTTTCGGCCGTTACACGCATCCATCTATCACACATCT
GCTGACGCAATCCACCATTTCGTCCGTCCTTCCCTCCCTTCTTTAGATCT
CCCAAAAGTTTGATCACAATAGCAGCATGCACGACATAGGTGCGTCCCGA
GGAGGGAGGGAGGGAGGGAGGAAGGAAAAGGGCGTGTGCGTATCCACCTT
GAGAAGGGGAGAGGGGGGGAAGGAGGGAGAGGGGGAGAGGGAAGGGAAAG
AAGGAAGAAAGGAGAGGAAAGCATACGCGTGCAGGCAGATTAAATTCTCG
CATTTTTCACACCCAATTTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCGC
TACCTCCCTCCGTCAATCAGACGATGTGTCTTCTCCCTTGGACAGTGAGA
TAGAGTCAATCCCCTCACCCACGGCTTCGGACATGAGCGAGCTCGGCCAG
GGGGGCCACGAACCCCAAGACGGTGAGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGTCAGGATGTTGGCATGAGCGTGTGAGAATCAGTATG
CGCTTGCTACTCTCTGTTGCTCTCCTTTCTCATTGAATTTCTCCCTTCTC
CTCCCCCCCCTCCAACTGCTGGTGCTGCTGCTGCTTCTCCTCTTCCTCCT
CCTCCTCCTCTTCTCAATCTCCTCCTCCTCCTTTCCCTCCTTGTGAACAG
GTGGATGCCATCAAGCAAATCACCCACCTCCTTCACGGAGTGGCCAGTCC
GTCAGACCCACACCAACCACGGTACCTCCCTCCCTCCCTCCCTCCCTCCC
TCTCTCCCTCCCCCGCCCGTCAAGACAGATCCCTCATTCCTCTCTCTCCC
TGTCTCCCTCCCTCCCTCCCTTGCTCCCTCCCCTTCCCTCCCTCTCTTCC
TCCCTCTCTACCCTCCAGGCCCTGCGGACATGCCTGACCGAGATTTCCTC
CACGCTAAGGGCGTAGCGGCGGCGTTTGCAGGATACCCGGCAAAATCCGT
ATATCAGGAGGGAAACGGTTTTGATGCCGTTCCCGATATGTACGTTGGGA
GGGAGGGAGCAAGGAAGAGAGGGAGGAAGGGAGAGAGAGAGAGTAAATAA
GCGGGAGAGTGGGAAGGAGGAGAAAGAAGACGCCTTCCCAACTGATGTGT
TTATATATGTGTGCCTATATACGTGTGTGTATCAAATGCGCATGTATGTG
TGTGTGTATATATATATATATACGTATCCATTCTTACACACGGCGTGTCT
TTCCTCTTTCTGACAGCTCGGCGGAGCTCGATCACTCCACTGGCCCAAGC
ACGCCGGTCAACTACAAGGAGGTAGGCCCAAGCCCACAAGCCCTCCCTCC
CTCTTTCCCTCCTTCCAGCTCCTTCTCCCTCCCTTCCTCCCTTCCTCTCT
CTTTTCAACGTGACATAAAAACTCAACTCTTCCTTCCTACCTTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCAGGCCAAGAACCCCCAAGACTTCAA
GTATCATCCTTCGCGCAATTTCCTCATCGGCGTCTCCGTCATCAACATCA
TCTGTGGCATCCTGTACATCTACTGGCGCTGCACCCGGTACGTCGTTGCC
CTTCCTCCTCCCCTCCTTCCCTTCCTCCTTTCTCCCCCTTCTCGTATGTA
TTCTTTTCTTTCTTGCATGTCTTCTTTTCGTCCCTACTTCCTTCTCCTCC
TCCCTCCCTTCCTCCCTCTCTCTCTCTCTCTCTCTCGTATACCTTCCTTT
CTTCCCTCTTCATCATCCTCCTCGTGTCCGCCTCATCAAGGCCATCATTA
TGACCCCCATACCATATCTCTCCATCTCCCAAAACCTCACCAATCACCCT
CCCTCCTCCCTCCCTCCCTCCCAGCTCCATGACCGGCGTGATGCACTCGT
GGTTTGCGTGGGTCTTTTTGTTCGGAGAGATCGTCATCACCCTCTCGGCG
TGGCAGTCCCACTGCTCCCGCTTCTTTCCCGTCAAGCGCACGCGCTGCAC
AGTCGACGACCTG back to topCoding sequence (CDS) from alignment at scaffold_113:608..4070- >mRNA_12095 ID=mRNA_12095|Name=jgi.p|Nanoce1779_2|634711|organism=Nannochloropsis oceanica|type=CDS|length=3240bp|location=Sequence derived from alignment at scaffold_113:608..4070- (Nannochloropsis oceanica)
CTCCATGACCGGCGTGATGCACTCGTGGTTTGCGTGGGTCTTTTTGTTCG
GAGAGATCGTCATCACCCTCTCGGCGTGGCAGTCCCACTGCTCCCGCTTC
TTTCCCGTCAAGCGCACGCGCTGCACAGTCGACGACCTGGCCAAGAACCC
CCAAGACTTCAAGTATCATCCTTCGCGCAATTTCCTCATCGGCGTCTCCG
TCATCAACATCATCTGTGGCATCCTGTACATCTACTGGCGCTGCACCCGC
TCGGCGGAGCTCGATCACTCCACTGGCCCAAGCACGCCGGTCAACTACAA
GGAGGCCCTGCGGACATGCCTGACCGAGATTTCCTCCACGCTAAGGGCGT
AGCGGCGGCGTTTGCAGGATACCCGGCAAAATCCGTATATCAGGAGGGAA
ACGGTTTTGATGCCGTTCCCGATATACGATGTGTCTTCTCCCTTGGACAG
TGAGATAGAGTCAATCCCCTCACCCACGGCTTCGGACATGAGCGAGCTCG
GCCAGGGGGGCCACGAACCCCAAGACGATGCACGACATAGCTCCATGACC
GGCGTGATGCACTCGTGGTTTGCGTGGGTCTTTTTGTTCGGAGAGATCGT
CATCACCCTCTCGGCGTGGCAGTCCCACTGCTCCCGCTTCTTTCCCGTCA
AGCGCACGCGCTGCACAGTCGACGACCTGGCCAAGAACCCCCAAGACTTC
AAGTATCATCCTTCGCGCAATTTCCTCATCGGCGTCTCCGTCATCAACAT
CATCTGTGGCATCCTGTACATCTACTGGCGCTGCACCCGCTCGGCGGAGC
TCGATCACTCCACTGGCCCAAGCACGCCGGTCAACTACAAGGAGGCCCTG
CGGACATGCCTGACCGAGATTTCCTCCACGCTAAGGGCGTAGCGGCGGCG
TTTGCAGGATACCCGGCAAAATCCGTATATCAGGAGGGAAACGGTTTTGA
TGCCGTTCCCGATATACGATGTGTCTTCTCCCTTGGACAGTGAGATAGAG
TCAATCCCCTCACCCACGGCTTCGGACATGAGCGAGCTCGGCCAGGGGGG
CCACGAACCCCAAGACGATGCACGACATAGCTCCATGACCGGCGTGATGC
ACTCGTGGTTTGCGTGGGTCTTTTTGTTCGGAGAGATCGTCATCACCCTC
TCGGCGTGGCAGTCCCACTGCTCCCGCTTCTTTCCCGTCAAGCGCACGCG
CTGCACAGTCGACGACCTGGCCAAGAACCCCCAAGACTTCAAGTATCATC
CTTCGCGCAATTTCCTCATCGGCGTCTCCGTCATCAACATCATCTGTGGC
ATCCTGTACATCTACTGGCGCTGCACCCGCTCGGCGGAGCTCGATCACTC
CACTGGCCCAAGCACGCCGGTCAACTACAAGGAGGCCCTGCGGACATGCC
TGACCGAGATTTCCTCCACGCTAAGGGCGTAGCGGCGGCGTTTGCAGGAT
ACCCGGCAAAATCCGTATATCAGGAGGGAAACGGTTTTGATGCCGTTCCC
GATATACGATGTGTCTTCTCCCTTGGACAGTGAGATAGAGTCAATCCCCT
CACCCACGGCTTCGGACATGAGCGAGCTCGGCCAGGGGGGCCACGAACCC
CAAGACGATGCACGACATAGCTCCATGACCGGCGTGATGCACTCGTGGTT
TGCGTGGGTCTTTTTGTTCGGAGAGATCGTCATCACCCTCTCGGCGTGGC
AGTCCCACTGCTCCCGCTTCTTTCCCGTCAAGCGCACGCGCTGCACAGTC
GACGACCTGGCCAAGAACCCCCAAGACTTCAAGTATCATCCTTCGCGCAA
TTTCCTCATCGGCGTCTCCGTCATCAACATCATCTGTGGCATCCTGTACA
TCTACTGGCGCTGCACCCGCTCGGCGGAGCTCGATCACTCCACTGGCCCA
AGCACGCCGGTCAACTACAAGGAGGCCCTGCGGACATGCCTGACCGAGAT
TTCCTCCACGCTAAGGGCGTAGCGGCGGCGTTTGCAGGATACCCGGCAAA
ATCCGTATATCAGGAGGGAAACGGTTTTGATGCCGTTCCCGATATACGAT
GTGTCTTCTCCCTTGGACAGTGAGATAGAGTCAATCCCCTCACCCACGGC
TTCGGACATGAGCGAGCTCGGCCAGGGGGGCCACGAACCCCAAGACGATG
CACGACATAGCTCCATGACCGGCGTGATGCACTCGTGGTTTGCGTGGGTC
TTTTTGTTCGGAGAGATCGTCATCACCCTCTCGGCGTGGCAGTCCCACTG
CTCCCGCTTCTTTCCCGTCAAGCGCACGCGCTGCACAGTCGACGACCTGG
CCAAGAACCCCCAAGACTTCAAGTATCATCCTTCGCGCAATTTCCTCATC
GGCGTCTCCGTCATCAACATCATCTGTGGCATCCTGTACATCTACTGGCG
CTGCACCCGCTCGGCGGAGCTCGATCACTCCACTGGCCCAAGCACGCCGG
TCAACTACAAGGAGGCCCTGCGGACATGCCTGACCGAGATTTCCTCCACG
CTAAGGGCGTAGCGGCGGCGTTTGCAGGATACCCGGCAAAATCCGTATAT
CAGGAGGGAAACGGTTTTGATGCCGTTCCCGATATACGATGTGTCTTCTC
CCTTGGACAGTGAGATAGAGTCAATCCCCTCACCCACGGCTTCGGACATG
AGCGAGCTCGGCCAGGGGGGCCACGAACCCCAAGACGATGCACGACATAG
CTCCATGACCGGCGTGATGCACTCGTGGTTTGCGTGGGTCTTTTTGTTCG
GAGAGATCGTCATCACCCTCTCGGCGTGGCAGTCCCACTGCTCCCGCTTC
TTTCCCGTCAAGCGCACGCGCTGCACAGTCGACGACCTGGCCAAGAACCC
CCAAGACTTCAAGTATCATCCTTCGCGCAATTTCCTCATCGGCGTCTCCG
TCATCAACATCATCTGTGGCATCCTGTACATCTACTGGCGCTGCACCCGC
TCGGCGGAGCTCGATCACTCCACTGGCCCAAGCACGCCGGTCAACTACAA
GGAGGCCCTGCGGACATGCCTGACCGAGATTTCCTCCACGCTAAGGGCGT
AGCGGCGGCGTTTGCAGGATACCCGGCAAAATCCGTATATCAGGAGGGAA
ACGGTTTTGATGCCGTTCCCGATATACGATGTGTCTTCTCCCTTGGACAG
TGAGATAGAGTCAATCCCCTCACCCACGGCTTCGGACATGAGCGAGCTCG
GCCAGGGGGGCCACGAACCCCAAGACGATGCACGACATAG back to top
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