jgi.p|Nanoce1779_2|531378, mRNA_7327 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|531378
Unique NamemRNA_7327
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length225
Alignment locationscaffold_19:221658..221882 -

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Properties
Property NameValue
TranscriptId531464
TrackFilteredModels2
ProteinId531378
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:221658..221882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531378gene_7327Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7327CDS_7327Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531378mRNA_7327-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7327 ID=mRNA_7327|Name=jgi.p|Nanoce1779_2|531378|organism=Nannochloropsis oceanica|type=mRNA|length=225bp
ATGCCCCGATATTTCTGTGATTACTGCCAGACGTATCTTACGCACGACTC
GGCTCCGGGGAGGAAGCAGCACAATCGCGGGTGGAAGCATCGGGAGAATG
TAAAGATGTACTACGAGCAGTACATGGCCGCCTGGGAAGCTTCTAAAGGT
AGGGACGGAGGGAGGGTTGGCGGGAAGGGGAGAAGGTGCGGGGAAATTTG
CGAAGGAGGGGAAGGGGAACAGTGA
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protein sequence of jgi.p|Nanoce1779_2|531378

>mRNA_7327-protein ID=mRNA_7327-protein|Name=jgi.p|Nanoce1779_2|531378|organism=Nannochloropsis oceanica|type=polypeptide|length=75bp
MPRYFCDYCQTYLTHDSAPGRKQHNRGWKHRENVKMYYEQYMAAWEASKG
RDGGRVGGKGRRCGEICEGGEGEQ*
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mRNA from alignment at scaffold_19:221658..221882-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7327 ID=mRNA_7327|Name=jgi.p|Nanoce1779_2|531378|organism=Nannochloropsis oceanica|type=mRNA|length=225bp|location=Sequence derived from alignment at scaffold_19:221658..221882- (Nannochloropsis oceanica)
ATGCCCCGATATTTCTGTGATTACTGCCAGACGTATCTTACGCACGACTC
GGCTCCGGGGAGGAAGCAGCACAATCGCGGGTGGAAGCATCGGGAGAATG
TAAAGATGTACTACGAGCAGTACATGGCCGCCTGGGAAGCTTCTAAAGGT
AGGGACGGAGGGAGGGTTGGCGGGAAGGGGAGAAGGTGCGGGGAAATTTG
CGAAGGAGGGGAAGGGGAACAGTGA
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Coding sequence (CDS) from alignment at scaffold_19:221658..221882-

>mRNA_7327 ID=mRNA_7327|Name=jgi.p|Nanoce1779_2|531378|organism=Nannochloropsis oceanica|type=CDS|length=225bp|location=Sequence derived from alignment at scaffold_19:221658..221882- (Nannochloropsis oceanica)
ATGCCCCGATATTTCTGTGATTACTGCCAGACGTATCTTACGCACGACTC
GGCTCCGGGGAGGAAGCAGCACAATCGCGGGTGGAAGCATCGGGAGAATG
TAAAGATGTACTACGAGCAGTACATGGCCGCCTGGGAAGCTTCTAAAGGT
AGGGACGGAGGGAGGGTTGGCGGGAAGGGGAGAAGGTGCGGGGAAATTTG
CGAAGGAGGGGAAGGGGAACAGTGA
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Synonyms
Publications