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Properties
Property Name | Value |
TranscriptId | 668980 |
Track | FilteredModels2 |
ProteinId | 668894 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_4 | supercontig | scaffold_4:1094373..1096635 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2224 ID=mRNA_2224|Name=jgi.p|Nanoce1779_2|668894|organism=Nannochloropsis oceanica|type=mRNA|length=2263bp ATGGCAACCCTCGACGAGCTCCTCCTCCACCAGCCGCAGGCGCAAGAAGG ACAAATCGGCTCTAATGGCAACGATGGGATATTTATAAAAAATTTGTTTA AGAGCTTAATTCAAGGCACGCGGGCTTCCAATGCGATTCCTTCTGGGGGT GTTGGAGAAGAGGGACGAGGCGAGGCTTCTGAATTCGCCTACCAAGCAGC TATCTCCCCAGTCTTTGCGGAGAAAGCCAATGAAGCCAGTGAAACAGTGC TTACCCTTCTGAAAAAACTGGTGCGCCACATGCGGAAAGCGGTGGGCGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAATTGACGAAGATGATGATGA CCTGTTATTGCCAGGCTTAGAGGACGTGGAGGACCCGGCTGCTTTTGAAG GCTTGGCAGACATCATGGAAGATCTACTTGATAATGTGGAAGGTTACTTG ATGAACAAGGGGAAGAAAGAAGTGAAGAAAAGCGAGAGTAGGGGAGGGGC AACGGCGACGATGTCGAATGAGTCGTGGGAGAGGCTACGCAACATGGCGG GAGCTGCACGACAAACAGCAATGGCAAGTCGATACAAGATAATGCTCTCT CAAACTTTAGACATCCCTAAACCGCAAGAGGCGTTTAAATCCGAAATCGA CAATCGGAGAGAAACTTGTTTTCGACCTCGGTGCTGGAGGGAGGGCGGGA GGGAGGAAGGGCAGGGACTGGAGACAGAAAGCCCCCATCTGTTCGAGACG GAGATCCGTAATTTTTCGTACATGCCGTGGCAGCTTGAGTTGCCGGGGGA GGAGGAGGTCAAGCTGCAGAAACCGTTGGCGCTGGAGCAGAGTGAGGCTG TAACGCTCGTGGACACGGTGGAGGGGCTGAAAGAAGCATTGCAGGTCGTG AGGGAGGAGTTAGAGGAGGAAGGGAACGGGGAAGGGGGGGGGGAGAAGAT GATTGCGGTTGATCTAGAAGCGCATAGCATGAGGTCTTTTCAAGGTTTGG TCTGTTTGATGCAGCTCTCGACGAGGAAGAGAGACTTTTTGATTGATACC CTCCAGGTCGAGGTACGGAGGGCGATGGGTCCCTTGTTGCTGGACTTGTT CACGGACCATACGGTGGTAAAGGTGTTTCATGGCGCCGACAGCGATATCA AGTGGCTGCAGCGTGACTTTGGTCTGTATGTTGTGAATCTGTTTGACACC TTCCTCGCGGCCCAGGCGCTCGGTTTCCCTTCCAAGTCGCTTGCTTATTT GCTCCATCATTACACGGGCGTCAAGGCCGATAAGCAATATCAGTTGGCTG ACTGGCGCATAAGACCCCTCCCAGAGATCATGCAGCGGTATGCTCGGGAA GACACGCATTATTTACTCTATATATTTAATTGCTTGCGGAGGGAGCTAGG GAGGGAGGGAGGGCGCGTGAGGGGTGTATGGGATGGTTCCAGGGAGGTAT GTCTGTTGAGGTATAGAAAAGAGAAGTTTGATCCGGAGGGGTACTTGAAG CTGATGGCGGGAGGGATGGGGGGATGGGAGGGAGGGAGGGAGGGCCCGGA GATGAAGTGTTTAGAGAGGCTGTGGGAGTGGAGGGATGGGGTGGCGAGGG AGGAGGATGAGAGCTCCGGGTATGTTTGCTCGGACCGACTTTTGTGTAGG ATTGCGAAGATGAGGCCTCGGACTTTTGGGGGGTTGACTGAGTGTGGAGG GGCGGGGGGGTCGTTGCCGATGCTGGTGACGAAGAGAGCGGAGGAAGTCT TGAAGGTCATAGGGGGAGGAGGAGGAGGAGGAGGGGGGTGACGGAGGAGG AGGGGCAATAGGAGGAAAAGGGGCATCTAATCACACGTTTCCAACTTTTC CGCCTCTGCCAGTCTCTTCAACGAGTGTGTTTGATCTTCATTTGCGGCGG CAAGAGCCAAAGGATGCCTCCCTCCCCTCCTCCCTCCCTTCCTCCTTCCC TCCCGTCCTCCCCACGGAGGAGTTGTACCTGACAGCAGGATGGACCTCGC CTTTGATCCCTTCCTCCCTCGACACGATACCATCGCTTGCTGTTCCCCCC ACCGTCATTTCTACCACCGCCAACACTACAGCAATCATTGACCCTTCCCG GCAGGGAGGGAGGGGGGGAGGGATGGCCGTAGTGCCGGCCCAGGGTAACG CAGGGATGGAGACATATCGCTCATTTTCTCATTCCTTGGAATTATCCTCC TCCCCAACCACACGTGCGACTGAAAATAAAGCAGCCGTGATGATGATGAT GTCGTCTGTGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|668894 >mRNA_2224-protein ID=mRNA_2224-protein|Name=jgi.p|Nanoce1779_2|668894|organism=Nannochloropsis oceanica|type=polypeptide|length=597bp MATLDELLLHQPQAQEGQIGSNGNDGIFIKNLFKSLIQGTRASNAIPSGG VGEEGRGEASEFAYQAAISPVFAEKANEASETVLTLLKKLVRHMRKAVGE EEEEEEEEEEIDEDDDDLLLPGLEDVEDPAAFEGLADIMEDLLDNVEGYL MNKGKKEVKKSESRGGATATMSNESWERLRNMAGAARQTAMASRYKIMLS QTLDIPKPQEAFKSEIDNRRETCFRPRCWREGGREEGQGLETESPHLFET EIRNFSYMPWQLELPGEEEVKLQKPLALEQSEAVTLVDTVEGLKEALQVV REELEEEGNGEGGGEKMIAVDLEAHSMRSFQGLVCLMQLSTRKRDFLIDT LQVEVRRAMGPLLLDLFTDHTVVKVFHGADSDIKWLQRDFGLYVVNLFDT FLAAQALGFPSKSLAYLLHHYTGVKADKQYQLADWRIRPLPEIMQRYARE DTHYLLYIFNCLRRELGREGGRVRGVWDGSREVCLLRYRKEKFDPEGYLK LMAGGMGGWEGGREGPEMKCLERLWEWRDGVAREEDESSGYVCSDRLLCR IAKMRPRTFGGLTECGGAGGSLPMLVTKRAEEVLKVIGGGGGGGGG* back to topmRNA from alignment at scaffold_4:1094373..1096635- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2224 ID=mRNA_2224|Name=jgi.p|Nanoce1779_2|668894|organism=Nannochloropsis oceanica|type=mRNA|length=2263bp|location=Sequence derived from alignment at scaffold_4:1094373..1096635- (Nannochloropsis oceanica) ATGGCAACCCTCGACGAGCTCCTCCTCCACCAGCCGCAGGCGCAAGAAGG
ACAAATCGGCTCTAATGGCAACGATGGGATATTTATAAAAAATTTGTTTA
AGAGCTTAATTCAAGGCACGCGGGCTTCCAATGCGATTCCTTCTGGGGGT
GTTGGAGAAGAGGGACGAGGCGAGGCTTCTGAATTCGCCTACCAAGCAGC
TATCTCCCCAGTCTTTGCGGAGAAAGCCAATGAAGCCAGTGAAACAGTGC
TTACCCTTCTGAAAAAACTGGTGCGCCACATGCGGAAAGCGGTGGGCGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAATTGACGAAGATGATGATGA
CCTGTTATTGCCAGGCTTAGAGGACGTGGAGGACCCGGCTGCTTTTGAAG
GCTTGGCAGACATCATGGAAGATCTACTTGATAATGTGGAAGGTTACTTG
ATGAACAAGGGGAAGAAAGAAGTGAAGAAAAGCGAGAGTAGGGGAGGGGC
AACGGCGACGATGTCGAATGAGTCGTGGGAGAGGCTACGCAACATGGCGG
GAGCTGCACGACAAACAGCAATGGCAAGTCGATACAAGATAATGCTCTCT
CAAACTTTAGACATCCCTAAACCGCAAGAGGCGTTTAAATCCGAAATCGA
CAATCGGAGAGAAACTTGTTTTCGACCTCGGTGCTGGAGGGAGGGCGGGA
GGGAGGAAGGGCAGGGACTGGAGACAGAAAGCCCCCATCTGTTCGAGACG
GAGATCCGTAATTTTTCGTACATGCCGTGGCAGCTTGAGTTGCCGGGGGA
GGAGGAGGTCAAGCTGCAGAAACCGTTGGCGCTGGAGCAGAGTGAGGCTG
TAACGCTCGTGGACACGGTGGAGGGGCTGAAAGAAGCATTGCAGGTCGTG
AGGGAGGAGTTAGAGGAGGAAGGGAACGGGGAAGGGGGGGGGGAGAAGAT
GATTGCGGTTGATCTAGAAGCGCATAGCATGAGGTCTTTTCAAGGTTTGG
TCTGTTTGATGCAGCTCTCGACGAGGAAGAGAGACTTTTTGATTGATACC
CTCCAGGTCGAGGTACGGAGGGCGATGGGTCCCTTGTTGCTGGACTTGTT
CACGGACCATACGGTGGTAAAGGTGTTTCATGGCGCCGACAGCGATATCA
AGTGGCTGCAGCGTGACTTTGGTCTGTATGTTGTGAATCTGTTTGACACC
TTCCTCGCGGCCCAGGCGCTCGGTTTCCCTTCCAAGTCGCTTGCTTATTT
GCTCCATCATTACACGGGCGTCAAGGCCGATAAGCAATATCAGTTGGCTG
ACTGGCGCATAAGACCCCTCCCAGAGATCATGCAGCGGTATGCTCGGGAA
GACACGCATTATTTACTCTATATATTTAATTGCTTGCGGAGGGAGCTAGG
GAGGGAGGGAGGGCGCGTGAGGGGTGTATGGGATGGTTCCAGGGAGGTAT
GTCTGTTGAGGTATAGAAAAGAGAAGTTTGATCCGGAGGGGTACTTGAAG
CTGATGGCGGGAGGGATGGGGGGATGGGAGGGAGGGAGGGAGGGCCCGGA
GATGAAGTGTTTAGAGAGGCTGTGGGAGTGGAGGGATGGGGTGGCGAGGG
AGGAGGATGAGAGCTCCGGGTATGTTTGCTCGGACCGACTTTTGTGTAGG
ATTGCGAAGATGAGGCCTCGGACTTTTGGGGGGTTGACTGAGTGTGGAGG
GGCGGGGGGGTCGTTGCCGATGCTGGTGACGAAGAGAGCGGAGGAAGTCT
TGAAGGTCATAGGGGGAGGAGGAGGAGGAGGAGGGGGGTGACGGAGGAGG
AGGGGCAATAGGAGGAAAAGGGGCATCTAATCACACGTTTCCAACTTTTC
CGCCTCTGCCAGTCTCTTCAACGAGTGTGTTTGATCTTCATTTGCGGCGG
CAAGAGCCAAAGGATGCCTCCCTCCCCTCCTCCCTCCCTTCCTCCTTCCC
TCCCGTCCTCCCCACGGAGGAGTTGTACCTGACAGCAGGATGGACCTCGC
CTTTGATCCCTTCCTCCCTCGACACGATACCATCGCTTGCTGTTCCCCCC
ACCGTCATTTCTACCACCGCCAACACTACAGCAATCATTGACCCTTCCCG
GCAGGGAGGGAGGGGGGGAGGGATGGCCGTAGTGCCGGCCCAGGGTAACG
CAGGGATGGAGACATATCGCTCATTTTCTCATTCCTTGGAATTATCCTCC
TCCCCAACCACACGTGCGACTGAAAATAAAGCAGCCGTGATGATGATGAT
GTCGTCTGTGGAG back to topCoding sequence (CDS) from alignment at scaffold_4:1094373..1096635- >mRNA_2224 ID=mRNA_2224|Name=jgi.p|Nanoce1779_2|668894|organism=Nannochloropsis oceanica|type=CDS|length=1791bp|location=Sequence derived from alignment at scaffold_4:1094373..1096635- (Nannochloropsis oceanica) ATGGCAACCCTCGACGAGCTCCTCCTCCACCAGCCGCAGGCGCAAGAAGG ACAAATCGGCTCTAATGGCAACGATGGGATATTTATAAAAAATTTGTTTA AGAGCTTAATTCAAGGCACGCGGGCTTCCAATGCGATTCCTTCTGGGGGT GTTGGAGAAGAGGGACGAGGCGAGGCTTCTGAATTCGCCTACCAAGCAGC TATCTCCCCAGTCTTTGCGGAGAAAGCCAATGAAGCCAGTGAAACAGTGC TTACCCTTCTGAAAAAACTGGTGCGCCACATGCGGAAAGCGGTGGGCGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAATTGACGAAGATGATGATGA CCTGTTATTGCCAGGCTTAGAGGACGTGGAGGACCCGGCTGCTTTTGAAG GCTTGGCAGACATCATGGAAGATCTACTTGATAATGTGGAAGGTTACTTG ATGAACAAGGGGAAGAAAGAAGTGAAGAAAAGCGAGAGTAGGGGAGGGGC AACGGCGACGATGTCGAATGAGTCGTGGGAGAGGCTACGCAACATGGCGG GAGCTGCACGACAAACAGCAATGGCAAGTCGATACAAGATAATGCTCTCT CAAACTTTAGACATCCCTAAACCGCAAGAGGCGTTTAAATCCGAAATCGA CAATCGGAGAGAAACTTGTTTTCGACCTCGGTGCTGGAGGGAGGGCGGGA GGGAGGAAGGGCAGGGACTGGAGACAGAAAGCCCCCATCTGTTCGAGACG GAGATCCGTAATTTTTCGTACATGCCGTGGCAGCTTGAGTTGCCGGGGGA GGAGGAGGTCAAGCTGCAGAAACCGTTGGCGCTGGAGCAGAGTGAGGCTG TAACGCTCGTGGACACGGTGGAGGGGCTGAAAGAAGCATTGCAGGTCGTG AGGGAGGAGTTAGAGGAGGAAGGGAACGGGGAAGGGGGGGGGGAGAAGAT GATTGCGGTTGATCTAGAAGCGCATAGCATGAGGTCTTTTCAAGGTTTGG TCTGTTTGATGCAGCTCTCGACGAGGAAGAGAGACTTTTTGATTGATACC CTCCAGGTCGAGGTACGGAGGGCGATGGGTCCCTTGTTGCTGGACTTGTT CACGGACCATACGGTGGTAAAGGTGTTTCATGGCGCCGACAGCGATATCA AGTGGCTGCAGCGTGACTTTGGTCTGTATGTTGTGAATCTGTTTGACACC TTCCTCGCGGCCCAGGCGCTCGGTTTCCCTTCCAAGTCGCTTGCTTATTT GCTCCATCATTACACGGGCGTCAAGGCCGATAAGCAATATCAGTTGGCTG ACTGGCGCATAAGACCCCTCCCAGAGATCATGCAGCGGTATGCTCGGGAA GACACGCATTATTTACTCTATATATTTAATTGCTTGCGGAGGGAGCTAGG GAGGGAGGGAGGGCGCGTGAGGGGTGTATGGGATGGTTCCAGGGAGGTAT GTCTGTTGAGGTATAGAAAAGAGAAGTTTGATCCGGAGGGGTACTTGAAG CTGATGGCGGGAGGGATGGGGGGATGGGAGGGAGGGAGGGAGGGCCCGGA GATGAAGTGTTTAGAGAGGCTGTGGGAGTGGAGGGATGGGGTGGCGAGGG AGGAGGATGAGAGCTCCGGGTATGTTTGCTCGGACCGACTTTTGTGTAGG ATTGCGAAGATGAGGCCTCGGACTTTTGGGGGGTTGACTGAGTGTGGAGG GGCGGGGGGGTCGTTGCCGATGCTGGTGACGAAGAGAGCGGAGGAAGTCT TGAAGGTCATAGGGGGAGGAGGAGGAGGAGGAGGGGGGTGA back to top
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