|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 614946 |
| Track | FilteredModels2 |
| ProteinId | 614860 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_93 | supercontig | scaffold_93:7230..8189 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11734 ID=mRNA_11734|Name=jgi.p|Nanoce1779_2|614860|organism=Nannochloropsis oceanica|type=mRNA|length=960bp
GGAGGGAGGGAGGGAGGGAGGGATAGGAAAGGGAGGACAATGCATGCAAG
TTGGTTTTTTCCGTTTGCGCTCCTCTTCGTCCTGCCTCGATCTGCAAGCA
TTTGGACCATACAACGTTTCTCACCTTCCCTCCCTCCCTCACTCCCTCCC
TCACTCCTCCCCTCCCTCAGGGCCATTGAGATCCATCCAGTGCACAACAA
GATCCACCAGCTGTCTGTGGCGCCCCTCATAGCCGAGGCCATCCTCAACA
TTCACGACTGCGGCAGTGTGTCCAGCGTGGTGGCAGGTGGGGAAGGAGGG
AAGGAGGGAGGGAGGGAGGGAGGGAGGGGGCGAAGAGTAGGTAGATGGCT
CCGGTGTTGACAACCTCTTCTGCTGACGCTCGCACTGACAATCCAACGCA
GGAGATCAAGAGCGGGAGAGTGTGCTTGAAAAAATCGTCATCCAATAGCG
ACGCATAGTGGAAAGGGAGGGAGCGGGAGGCCGGGGGGGAGAGGGGAGAA
AGAGGATTAGGTGCTGGAGTTTGTGCAAGGGACAAAGGACGGGCAGCTAA
ATGGGAGGAGGGGAAGGGGAGGAAGGAGGGCAGATGAGATAGGAAGAAAA
GTGATGTGACTTTAATGATGATGAGATGATGATTAGAAGAGGGGAAGATG
AAAGCAGAGGCGGTGTTTGTGGTCGGCGTGTGTTGCGTGGGGATGGGAAA
GCGAATGGGAGAGATCCACTGCTTTTTGGTAGCCAGTCAGGAAGAAGGAG
AAAGAAAAAGGGTTGAAAAGAAGGAGAATGAGAAAGAAAGATGTGAAAAG
AAAATGAGAGGAACGAACAAAGGAAGAAAGAGAAGATTAATCATGCTCAA
GAAAAAATGGTCGTCATGGCTGTCGTCTCCTTCTTCTCTCCTTCTTCTTC
TTCTGCCTCTTCTTCTTTTGCCTTTTATTCTTTTCTTTCTTTCGTGGTCA
TCATCTTCTT back to topprotein sequence of jgi.p|Nanoce1779_2|614860 >mRNA_11734-protein ID=mRNA_11734-protein|Name=jgi.p|Nanoce1779_2|614860|organism=Nannochloropsis oceanica|type=polypeptide|length=107bp
MHASWFFPFALLFVLPRSASIWTIQRFSPSLPPSLPPSLLPSLRAIEIHP
VHNKIHQLSVAPLIAEAILNIHDCGSVSSVVAGGEGGKEGGREGGRGRRV
GRWLRC* back to topmRNA from alignment at scaffold_93:7230..8189+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11734 ID=mRNA_11734|Name=jgi.p|Nanoce1779_2|614860|organism=Nannochloropsis oceanica|type=mRNA|length=960bp|location=Sequence derived from alignment at scaffold_93:7230..8189+ (Nannochloropsis oceanica)
GGAGGGAGGGAGGGAGGGAGGGATAGGAAAGGGAGGACAATGCATGCAAG
TTGGTTTTTTCCGTTTGCGCTCCTCTTCGTCCTGCCTCGATCTGCAAGCA
TTTGGACCATACAACGTTTCTCACCTTCCCTCCCTCCCTCACTCCCTCCC
TCACTCCTCCCCTCCCTCAGGGCCATTGAGATCCATCCAGTGCACAACAA
GATCCACCAGCTGTCTGTGGCGCCCCTCATAGCCGAGGCCATCCTCAACA
TTCACGACTGCGGCAGTGTGTCCAGCGTGGTGGCAGGTGGGGAAGGAGGG
AAGGAGGGAGGGAGGGAGGGAGGGAGGGGGCGAAGAGTAGGTAGATGGCT
CCGGTGTTGACAACCTCTTCTGCTGACGCTCGCACTGACAATCCAACGCA
GGAGATCAAGAGCGGGAGAGTGTGCTTGAAAAAATCGTCATCCAATAGCG
ACGCATAGTGGAAAGGGAGGGAGCGGGAGGCCGGGGGGGAGAGGGGAGAA
AGAGGATTAGGTGCTGGAGTTTGTGCAAGGGACAAAGGACGGGCAGCTAA
ATGGGAGGAGGGGAAGGGGAGGAAGGAGGGCAGATGAGATAGGAAGAAAA
GTGATGTGACTTTAATGATGATGAGATGATGATTAGAAGAGGGGAAGATG
AAAGCAGAGGCGGTGTTTGTGGTCGGCGTGTGTTGCGTGGGGATGGGAAA
GCGAATGGGAGAGATCCACTGCTTTTTGGTAGCCAGTCAGGAAGAAGGAG
AAAGAAAAAGGGTTGAAAAGAAGGAGAATGAGAAAGAAAGATGTGAAAAG
AAAATGAGAGGAACGAACAAAGGAAGAAAGAGAAGATTAATCATGCTCAA
GAAAAAATGGTCGTCATGGCTGTCGTCTCCTTCTTCTCTCCTTCTTCTTC
TTCTGCCTCTTCTTCTTTTGCCTTTTATTCTTTTCTTTCTTTCGTGGTCA
TCATCTTCTT back to topCoding sequence (CDS) from alignment at scaffold_93:7230..8189+ >mRNA_11734 ID=mRNA_11734|Name=jgi.p|Nanoce1779_2|614860|organism=Nannochloropsis oceanica|type=CDS|length=321bp|location=Sequence derived from alignment at scaffold_93:7230..8189+ (Nannochloropsis oceanica)
ATGCATGCAAGTTGGTTTTTTCCGTTTGCGCTCCTCTTCGTCCTGCCTCG
ATCTGCAAGCATTTGGACCATACAACGTTTCTCACCTTCCCTCCCTCCCT
CACTCCCTCCCTCACTCCTCCCCTCCCTCAGGGCCATTGAGATCCATCCA
GTGCACAACAAGATCCACCAGCTGTCTGTGGCGCCCCTCATAGCCGAGGC
CATCCTCAACATTCACGACTGCGGCAGTGTGTCCAGCGTGGTGGCAGGTG
GGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGGGCGAAGAGTA
GGTAGATGGCTCCGGTGTTGA back to top
|