jgi.p|Nanoce1779_2|667949, gene_989 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667949
Unique Namegene_989
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:946865..949617 +

Link to JBrowse

Properties
Property NameValue
TranscriptId668035
ProteinId667949
Product nameSGT1 protein-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:946865..949617 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03980NO02G03980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667949mRNA_989-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667949mRNA_989Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667949

>mRNA_989-protein ID=mRNA_989-protein|Name=jgi.p|Nanoce1779_2|667949|organism=Nannochloropsis oceanica|type=polypeptide|length=816bp
MAPHPPPSSEPALEEFMRPDASFLTELRKRGQEMAEDFVAFELYVTEGTG
YKENADGQQKTTDLAKCVAARVLHVTETYRAAYPWHFEAFAFFPLENDSP
TFEPSSSSSSSSPSYPSSSLTTTSLPLLQGRVCVGENVEDEWFVVWLLQQ
ATADPELAALGLTARVWDADGDFLLIQAALVIPDWLDPDNSMFRVWIRGG
RFHFLSEVHHPLTAVTRPLTAQRALLLLASSSSSSSSPTSTVAPWLDGVL
DERLGIYPDAIEGSKHRAACYLPLSIAVLLRERPYLVAAAVRALRSREPG
ELLRMMKGERGSGGGGMGGGGGGGELRFEPRPLVPVCVTFSRYLFGQVEA
DELQPPKAYLTAIADVMTMGGERGGRMGEKKEEGNRGRDRMKAAVSRGVR
LACGLEILYWRSKQGEERGREGGQEEWKAYLARLQGKGFWDGAMEGSKEY
RERMTLAKKAFQERRASSCQNGGAAGESGGGEETYEIIDEILLKEGDKMK
VEDFAQALSELRADDGEEWMEIVPGELDELLEKYGQPLTGEGEGRMFFDD
DEEDAEEEEEGEEEEEKEEEEEGGRDGRGEDLKSMVEGMKHFIGAMAGLE
GAEITGGRRASTSDDGNGLRAAKKGEDVSFDVSRLLDILEGRDIERSSRA
GMMVGRTEGGMHLGNEEDGEEEVEMVGRSKERVYTREVKVKSWNGGDSDD
EDDSDEEEEEDEREGEKEEKEAMEAYITQMERELKGTTLAYTFDRVPRAC
ANGDGEKRDKLEKEEENVDEDEELPPVDVDLNLVRHLLESVAAQGSLPGP
ASNMLGEVMKSMEAD*
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Synonyms
Publications