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Properties
| Property Name | Value |
|---|
| TranscriptId | 407520 |
| Track | FilteredModels2 |
| ProteinId | 407434 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_72 | supercontig | scaffold_72:27889..29402 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10834 ID=mRNA_10834|Name=jgi.p|Nanoce1779_2|407434|organism=Nannochloropsis oceanica|type=mRNA|length=1087bp
ACGCTTCACAGGAAAGGAGGCATGGCGACTAATGGCGGGCCTCCCCCTTC
GCTCTCCTCCTCCTCCTCTTCCTCAACATCTTCCTCTTCATCCCTTCCTT
CTCCTTCCACTTCCTCGCCTGTCCTGAGCCCCTCCCTCTGCCTCGAACTG
GAGTCGTTCTTACGGTAAGCAAGTTAACGATTTAACGAGAGCAACAAACA
AGGGGCGAGAGAAGAAAAACACACACGGGAGGCATTATTAATGGTCGCAG
AGAGAGCAGTTCTGATCATTAGGATGACGAGCATCATGATCCATCAAATC
ATTCCGCTTTCCTTTTCTCTGCATCACACGTGCGTGCGTTTTTCTCTCTT
ACCAACCCTTACTTCCTCCCTCACTCTCTCTCTTCCTACCTTTTTCCCCC
TCTCCCCAAGGCCCTCCGTCGTAGGCACGCTGCTTCCCAAGTATGTCTCG
GCAGCCCAAAATTTCCTCTCCCTCCCACCCGAAGCTCGCTCGCCTCCTCC
CGCATTCCCTCCCTCCCTCCCGACCTCGCCCTTGCCGTTTCCTCCGTGCC
AGAGCAGGGAAGAGGTGAAGGCTTATGTCCTAGATCACAAGGAGGCTCTG
TTTCGGCGATGGATCAGCTCCGAGCTGAAGCGCCAGAGCATGGTGTCCCG
CTTCCTGGCCTTTTGCGGGCTCTCCTTCTTCCTGCGCCCCATCTCTGTTT
CCGGTACCATCACCACATACTGCGTCGATGTGCGGGAAGAGGTGTGTAGG
CACACGCCCTCCTCCCATTCCTCCCTCCCACCTCCTCAGTTGGACATACT
CACCTTTCTCTTGCCCTCCCTCCGTCCCTCCCTCCCTCCCTTAGAACTCC
GACGGTACGCCTGGAGCGGTGTATACGTTTGAGGTCTCCGCCTCCCCTTC
CTCCCTCCCTCCTTCGGTCCCTTCTTCTATCCCTGCCTCGGAGGAAGCCA
AAGATTCATTTGCTGAAGCAGATAATCCCTCCTCCTCCCTAACCTCCTCC
TCCTCCTCCTCCTCCCCCTCCTCCCTGGCCATCGGGATCATTAAGGACGG
CGGGACCGAGGGCGGGAGGGAGGAAGGGAGGGAAGGC back to topprotein sequence of jgi.p|Nanoce1779_2|407434 >mRNA_10834-protein ID=mRNA_10834-protein|Name=jgi.p|Nanoce1779_2|407434|organism=Nannochloropsis oceanica|type=polypeptide|length=214bp
MVAERAVLIIRMTSIMIHQIIPLSFSLHHTCVRFSLLPTLTSSLTLSLPT
FFPLSPRPSVVGTLLPKYVSAAQNFLSLPPEARSPPPAFPPSLPTSPLPF
PPCQSREEVKAYVLDHKEALFRRWISSELKRQSMVSRFLAFCGLSFFLRP
ISVSGTITTYCVDVREEVCRHTPSSHSSLPPPQLDILTFLLPSLRPSLPP
LELRRYAWSGVYV* back to topmRNA from alignment at scaffold_72:27889..29402+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10834 ID=mRNA_10834|Name=jgi.p|Nanoce1779_2|407434|organism=Nannochloropsis oceanica|type=mRNA|length=1514bp|location=Sequence derived from alignment at scaffold_72:27889..29402+ (Nannochloropsis oceanica)
ACGCTTCACAGGAAAGGAGGCATGGCGACTAATGGCGGGCCTCCCCCTTC
GCTCTCCTCCTCCTCCTCTTCCTCAACATCTTCCTCTTCATCCCTTCCTT
CTCCTTCCACTTCCTCGCCTGTCCTGAGCCCCTCCCTCTGCCTCGAACTG
GAGTCGTTCTTACGGTAAGCAAGTTAACGATTTAACGAGAGCAACAAACA
AGGGGCGAGAGAAGAAAAACACACACGGGAGGCATTATTAATGGTCGCAG
AGAGAGCAGTTCTGATCATTAGGATGACGAGCATCATGATCCATCAAATC
ATTCCGCTTTCCTTTTCTCTGCATCACACGTGCGTGCGTTTTTCTCTCTT
ACCAACCCTTACTTCCTCCCTCACTCTCTCTCTTCCTACCTTTTTCCCCC
TCTCCCCAAGGCCCTCCGTCGTAGGCACGCTGCTTCCCAAGTATGTCTCG
GCAGCCCAAAATTTCCTCTCCCTCCCACCCGAAGCTCGCTCGCCTCCTCC
CGCATTCCCTCCCTCCCTCCCGACCTCGCCCTTGCCGTTTCCTCCGTGCC
AGAGCAGGGAAGAGGTGAAGGCTTATGTCCTAGATCACAAGGAGGCTCTG
TTTCGGCGATGGTAAGGGAGAGAAGAAAAGATGAAGAGAGGGAAAACGGA
GGAAGGAGGGGGAGGGAGTTTTGCTGAGTGACGAAATCACCCGGATCATA
CATATTTAATCAATTGGATCGTTAATTGATTGTAATAGGGTTCACCCAGT
TCCCCTTCCGCCCTTCTGTCCTCCCAGCCTCCCTCTTTTTCTTCCAATGC
AACTGGATCAGCGTCTGACGCCTTTTTCCCTCCCTTCCTCCCTCCCTCAG
GATCAGCTCCGAGCTGAAGCGCCAGAGCATGGTGTCCCGCTTCCTGGCCT
TTTGCGGGCTCTCCTTCTTCCTGCGCCCCATCTCTGTTTCCGGTACCATC
ACCACATACTGCGTCGATGTGCGGGAAGAGGTGTGTAGGCACACGCCCTC
CTCCCATTCCTCCCTCCCACCTCCTCAGTTGGACATACTCACCTTTCTCT
TGCCCTCCCTCCGTCCCTCCCTCCCTCCCTTAGAACTCCGACGGTACGCC
TGGAGCGGTGTATACGTTTGAGGTCTCCGCCTCCCCTTCCTCCCTCCCTC
CTTCGGTCCCTTCTTCTATCCCTGCCTCGGAGGAAGCCAAAGATTCATTT
GCTGAAGCAGGTGAGTCTTGGCCCTCCCTTTTTCCCTCCCTCCCGTCCTG
TGGGCGTGCGTTTCGAGGCAGGAACGCCTGGGTCCCTCTCGCCTCCCCCC
CTAATTCAAACGACCCTTCCACTCTATCTTTCATCATCTTCTCACTAATC
AACCCTCCCTCCCTCCCTCCCCCCCCCTCCCCCTCTCTCCTTCTCCAGAT
AATCCCTCCTCCTCCCTAACCTCCTCCTCCTCCTCCTCCTCCCCCTCCTC
CCTGGCCATCGGGATCATTAAGGACGGCGGGACCGAGGGCGGGAGGGAGG
AAGGGAGGGAAGGC back to topCoding sequence (CDS) from alignment at scaffold_72:27889..29402+ >mRNA_10834 ID=mRNA_10834|Name=jgi.p|Nanoce1779_2|407434|organism=Nannochloropsis oceanica|type=CDS|length=1284bp|location=Sequence derived from alignment at scaffold_72:27889..29402+ (Nannochloropsis oceanica)
ATGGTCGCAGAGAGAGCAGTTCTGATCATTAGGATGACGAGCATCATGAT
CCATCAAATCATTCCGCTTTCCTTTTCTCTGCATCACACGTGCGTGCGTT
TTTCTCTCTTACCAACCCTTACTTCCTCCCTCACTCTCTCTCTTCCTACC
TTTTTCCCCCTCTCCCCAAGGCCCTCCGTCGTAGGCACGCTGCTTCCCAA
GTATGTCTCGGCAGCCCAAAATTTCCTCTCCCTCCCACCCGAAGCTCGCT
CGCCTCCTCCCGCATTCCCTCCCTCCCTCCCGACCTCGCCCTTGCCGTTT
CCTCCGTGCCAGAGCAGGGAAGAGGTGAAGGCTTATGTCCTAGATCACAA
GGAGGCTCTGTTTCGGCGATGGATCAGCTCCGAGCTGAAGCGCCAGAGCA
TGGTGTCCCGCTTCCTGGCCTTTTGCGGGCTCTCCTTCTTCCTGCGCCCC
ATCTCTGTTTCCGGTACCATCACCACATACTGCGTCGATGTGCGGGAAGA
GGTGTGTAGGCACACGCCCTCCTCCCATTCCTCCCTCCCACCTCCTCAGT
TGGACATACTCACCTTTCTCTTGCCCTCCCTCCGTCCCTCCCTCCCTCCC
TTAGAACTCCGACGGTACGCCTGGAGCGGTGTATACGTTTGAATGGTCGC
AGAGAGAGCAGTTCTGATCATTAGGATGACGAGCATCATGATCCATCAAA
TCATTCCGCTTTCCTTTTCTCTGCATCACACGTGCGTGCGTTTTTCTCTC
TTACCAACCCTTACTTCCTCCCTCACTCTCTCTCTTCCTACCTTTTTCCC
CCTCTCCCCAAGGCCCTCCGTCGTAGGCACGCTGCTTCCCAAGTATGTCT
CGGCAGCCCAAAATTTCCTCTCCCTCCCACCCGAAGCTCGCTCGCCTCCT
CCCGCATTCCCTCCCTCCCTCCCGACCTCGCCCTTGCCGTTTCCTCCGTG
CCAGAGCAGGGAAGAGGTGAAGGCTTATGTCCTAGATCACAAGGAGGCTC
TGTTTCGGCGATGGATCAGCTCCGAGCTGAAGCGCCAGAGCATGGTGTCC
CGCTTCCTGGCCTTTTGCGGGCTCTCCTTCTTCCTGCGCCCCATCTCTGT
TTCCGGTACCATCACCACATACTGCGTCGATGTGCGGGAAGAGGTGTGTA
GGCACACGCCCTCCTCCCATTCCTCCCTCCCACCTCCTCAGTTGGACATA
CTCACCTTTCTCTTGCCCTCCCTCCGTCCCTCCCTCCCTCCCTTAGAACT
CCGACGGTACGCCTGGAGCGGTGTATACGTTTGA back to top
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