jgi.p|Nanoce1779_2|423381, gene_4061 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|423381
Unique Namegene_4061
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:746165..748260 -

Link to JBrowse

Properties
Property NameValue
TranscriptId423467
ProteinId423381
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:746165..748260 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01540NO10G01540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|423381mRNA_4061-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|423381mRNA_4061Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|423381

>mRNA_4061-protein ID=mRNA_4061-protein|Name=jgi.p|Nanoce1779_2|423381|organism=Nannochloropsis oceanica|type=polypeptide|length=404bp
MSECNHATVTAPIPPASRASSCSVSPPRGSALRESHMFASSGTTISTTTT
NGNGLSSTAALMAYKAYEVEAEDAGMGSGIQGLQSSSVITPLVASLTSPV
QHQDHQQQQPQAHQQQQQQQAYQYHYQFPPYSSQQQHQQYQQYQQQQLRQ
PPPQYQQQQHHQQHQQQQQQHQHQPSFQHYQQQQLPLPPQQQQEPSPDPT
SDSMQYMKPDQLVENLVEQFWASEATRIRQIDPSATDLRLQELPLARVKK
VMKQDEEVHGSPKVLISMEALVIMAKACELFLLELTLRGWQMTKHNARRT
LQRVDLAQAIIKCDVFDFLIDIVPRDQAIPTTRAYTRHAPAIDAVAIATD
DDIGAEEDGDEFIEEEKEVKGSGTDSAYGRDSEKRGERRGGGVVEVIEEI
RMR*
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Synonyms
Publications