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Properties
| Property Name | Value |
|---|
| TranscriptId | 615024 |
| Track | FilteredModels2 |
| ProteinId | 614938 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_93 | supercontig | scaffold_93:45715..46904 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11745 ID=mRNA_11745|Name=jgi.p|Nanoce1779_2|614938|organism=Nannochloropsis oceanica|type=mRNA|length=981bp
ACAGACAGCAGCTAGGAGCCCGTTGTCCGTTCTTCAAACCCGTAATCCTG
CGGTCACATCATGGAGGTTGCTGGGAGCATCAGCCAAAAGAAGGGCACCC
ATGCACGCCCCACTGCTGCCTCCATCACTTCCTTCTCTTCCTCTAGCAAC
CGCCGGGTCTCCTCCTCGTCGGGCGAGTCCACCGACCCGTTGGAACTTAG
CACGGAGTTTTCCGTCGAGGGAGGAAGAGAGGGGGCGAGGGGAAAGGAGA
GTTGGGAAGCGGAGAGACGAAGACCTGTGGTGTTAACCCCTCCGCCCCGG
GCTCGCTATGATGACCCAGTAGAGGAGGAGGAAGGAGAGGGAGGAGCGGC
GCCAGGATTAATTGCACGGGGACTGGACGAGGAAGGTGGAGAAGTGCCCC
CCCTCCCTCCTCCTTCTTCACTCCAGCAAGTGCAACGACAGCAGCATCCG
CTCTCTTCCTCTTCCTCCTTTGGGTTCATATCCAGGTCGCAGGGTGCTGC
CACCACCACCAACAACACTGACCATCATCGTCATCACCAGCAGGAGCCGA
AAGAATATACAGACGGGGATCACGAGGCAGGGGATGGGGGAGGAGGAGGA
CGAGACTATTTCTTCCCGCCCTCTCCCCCTCCTCCTCCTTCCCCTCCTAT
TCCTCGTCCTCTTCTGGGTTCGTCCCTGTCGCTGACGCCTGAAAGGAAGG
ACGGCCGATCGAGTGCCCGCTTGAATACGAAAGCAGCAGGACCGGCATTA
GCATCAGCATCTCCTCCTCCTCCTCCTTGTGCGCTGTATGGGGAGCAGGA
GGGGAGGGCTGGAGGACGGGCGGGAGGGATGTGCGATGGTGGAGGGGGCG
GAGGAGAAGGCAGAAGTGGAGGAGGGGAAGGAGGAAAGAGGGGATCGGAC
ATCTTATACGGAAGAGGAAAGGGGCTGATGGAGGCAGAGCCATCGATGGA
GGGAAGGGGGGAGGAGGAGGAGGAGGAGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|614938 >mRNA_11745-protein ID=mRNA_11745-protein|Name=jgi.p|Nanoce1779_2|614938|organism=Nannochloropsis oceanica|type=polypeptide|length=307bp
MEVAGSISQKKGTHARPTAASITSFSSSSNRRVSSSSGESTDPLELSTEF
SVEGGREGARGKESWEAERRRPVVLTPPPRARYDDPVEEEEGEGGAAPGL
IARGLDEEGGEVPPLPPPSSLQQVQRQQHPLSSSSSFGFISRSQGAATTT
NNTDHHRHHQQEPKEYTDGDHEAGDGGGGGRDYFFPPSPPPPPSPPIPRP
LLGSSLSLTPERKDGRSSARLNTKAAGPALASASPPPPPCALYGEQEGRA
GGRAGGMCDGGGGGGEGRSGGGEGGKRGSDILYGRGKGLMEAEPSMEGRG
EEEEEEE back to topmRNA from alignment at scaffold_93:45715..46904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11745 ID=mRNA_11745|Name=jgi.p|Nanoce1779_2|614938|organism=Nannochloropsis oceanica|type=mRNA|length=1190bp|location=Sequence derived from alignment at scaffold_93:45715..46904- (Nannochloropsis oceanica)
ACAGACAGCAGCTAGGAGCCCGTTGTCCGTTCTTCAAACCCGTAATCCTG
CGGTCACATCATGGTAAGCAGTTTATCCTCTCGACTTCCTTGTCGCCCCC
ATCCTCCTCCTCCTCCTTCTCTTCCTCCTTTTCAATCACCCCATCCTCTT
CCTCTTCATCCTCTTCCTCATTCTGCTCTCCTTTTCTTCTTCATTCTCCT
CTCTCCCCCCTATACGCTCGACTCCTCATTCCCTCCTCCCAAACTAATGC
CCATTCCTTTGTTCCATGACAGGAGGTTGCTGGGAGCATCAGCCAAAAGA
AGGGCACCCATGCACGCCCCACTGCTGCCTCCATCACTTCCTTCTCTTCC
TCTAGCAACCGCCGGGTCTCCTCCTCGTCGGGCGAGTCCACCGACCCGTT
GGAACTTAGCACGGAGTTTTCCGTCGAGGGAGGAAGAGAGGGGGCGAGGG
GAAAGGAGAGTTGGGAAGCGGAGAGACGAAGACCTGTGGTGTTAACCCCT
CCGCCCCGGGCTCGCTATGATGACCCAGTAGAGGAGGAGGAAGGAGAGGG
AGGAGCGGCGCCAGGATTAATTGCACGGGGACTGGACGAGGAAGGTGGAG
AAGTGCCCCCCCTCCCTCCTCCTTCTTCACTCCAGCAAGTGCAACGACAG
CAGCATCCGCTCTCTTCCTCTTCCTCCTTTGGGTTCATATCCAGGTCGCA
GGGTGCTGCCACCACCACCAACAACACTGACCATCATCGTCATCACCAGC
AGGAGCCGAAAGAATATACAGACGGGGATCACGAGGCAGGGGATGGGGGA
GGAGGAGGACGAGACTATTTCTTCCCGCCCTCTCCCCCTCCTCCTCCTTC
CCCTCCTATTCCTCGTCCTCTTCTGGGTTCGTCCCTGTCGCTGACGCCTG
AAAGGAAGGACGGCCGATCGAGTGCCCGCTTGAATACGAAAGCAGCAGGA
CCGGCATTAGCATCAGCATCTCCTCCTCCTCCTCCTTGTGCGCTGTATGG
GGAGCAGGAGGGGAGGGCTGGAGGACGGGCGGGAGGGATGTGCGATGGTG
GAGGGGGCGGAGGAGAAGGCAGAAGTGGAGGAGGGGAAGGAGGAAAGAGG
GGATCGGACATCTTATACGGAAGAGGAAAGGGGCTGATGGAGGCAGAGCC
ATCGATGGAGGGAAGGGGGGAGGAGGAGGAGGAGGAGGAG back to topCoding sequence (CDS) from alignment at scaffold_93:45715..46904- >mRNA_11745 ID=mRNA_11745|Name=jgi.p|Nanoce1779_2|614938|organism=Nannochloropsis oceanica|type=CDS|length=1842bp|location=Sequence derived from alignment at scaffold_93:45715..46904- (Nannochloropsis oceanica)
GAGGTTGCTGGGAGCATCAGCCAAAAGAAGGGCACCCATGCACGCCCCAC
TGCTGCCTCCATCACTTCCTTCTCTTCCTCTAGCAACCGCCGGGTCTCCT
CCTCGTCGGGCGAGTCCACCGACCCGTTGGAACTTAGCACGGAGTTTTCC
GTCGAGGGAGGAAGAGAGGGGGCGAGGGGAAAGGAGAGTTGGGAAGCGGA
GAGACGAAGACCTGTGGTGTTAACCCCTCCGCCCCGGGCTCGCTATGATG
ACCCAGTAGAGGAGGAGGAAGGAGAGGGAGGAGCGGCGCCAGGATTAATT
GCACGGGGACTGGACGAGGAAGGTGGAGAAGTGCCCCCCCTCCCTCCTCC
TTCTTCACTCCAGCAAGTGCAACGACAGCAGCATCCGCTCTCTTCCTCTT
CCTCCTTTGGGTTCATATCCAGGTCGCAGGGTGCTGCCACCACCACCAAC
AACACTGACCATCATCGTCATCACCAGCAGGAGCCGAAAGAATATACAGA
CGGGGATCACGAGGCAGGGGATGGGGGAGGAGGAGGACGAGACTATTTCT
TCCCGCCCTCTCCCCCTCCTCCTCCTTCCCCTCCTATTCCTCGTCCTCTT
CTGGGTTCGTCCCTGTCGCTGACGCCTGAAAGGAAGGACGGCCGATCGAG
TGCCCGCTTGAATACGAAAGCAGCAGGACCGGCATTAGCATCAGCATCTC
CTCCTCCTCCTCCTTGTGCGCTGTATGGGGAGCAGGAGGGGAGGGCTGGA
GGACGGGCGGGAGGGATGTGCGATGGTGGAGGGGGCGGAGGAGAAGGCAG
AAGTGGAGGAGGGGAAGGAGGAAAGAGGGGATCGGACATCTTATACGGAA
GAGGAAAGGGGCTGATGGAGGCAGAGCCATCGATGGAGGGAAGGGGGGAG
GAGGAGGAGGAGGAGGAGATGGAGGTTGCTGGGAGCATCAGCCAAAAGAA
GGGCACCCATGCACGCCCCACTGCTGCCTCCATCACTTCCTTCTCTTCCT
CTAGCAACCGCCGGGTCTCCTCCTCGTCGGGCGAGTCCACCGACCCGTTG
GAACTTAGCACGGAGTTTTCCGTCGAGGGAGGAAGAGAGGGGGCGAGGGG
AAAGGAGAGTTGGGAAGCGGAGAGACGAAGACCTGTGGTGTTAACCCCTC
CGCCCCGGGCTCGCTATGATGACCCAGTAGAGGAGGAGGAAGGAGAGGGA
GGAGCGGCGCCAGGATTAATTGCACGGGGACTGGACGAGGAAGGTGGAGA
AGTGCCCCCCCTCCCTCCTCCTTCTTCACTCCAGCAAGTGCAACGACAGC
AGCATCCGCTCTCTTCCTCTTCCTCCTTTGGGTTCATATCCAGGTCGCAG
GGTGCTGCCACCACCACCAACAACACTGACCATCATCGTCATCACCAGCA
GGAGCCGAAAGAATATACAGACGGGGATCACGAGGCAGGGGATGGGGGAG
GAGGAGGACGAGACTATTTCTTCCCGCCCTCTCCCCCTCCTCCTCCTTCC
CCTCCTATTCCTCGTCCTCTTCTGGGTTCGTCCCTGTCGCTGACGCCTGA
AAGGAAGGACGGCCGATCGAGTGCCCGCTTGAATACGAAAGCAGCAGGAC
CGGCATTAGCATCAGCATCTCCTCCTCCTCCTCCTTGTGCGCTGTATGGG
GAGCAGGAGGGGAGGGCTGGAGGACGGGCGGGAGGGATGTGCGATGGTGG
AGGGGGCGGAGGAGAAGGCAGAAGTGGAGGAGGGGAAGGAGGAAAGAGGG
GATCGGACATCTTATACGGAAGAGGAAAGGGGCTGATGGAGGCAGAGCCA
TCGATGGAGGGAAGGGGGGAGGAGGAGGAGGAGGAGGAGATG back to top
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