jgi.p|Nanoce1779_2|592380, mRNA_5387 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|592380
Unique Name	mRNA_5387
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5184
Alignment location	scaffold_13:312003..317549 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	592466
Track	FilteredModels2
ProteinId	592380

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_13	supercontig	scaffold_13:312003..317549 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592380	gene_5387	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592380	mRNA_5387-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5387	CDS_5387	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_13:312003..317549-
coding sequence from alignment at scaffold_13:312003..317549-

mRNA sequence

>mRNA_5387 ID=mRNA_5387|Name=jgi.p|Nanoce1779_2|592380|organism=Nannochloropsis oceanica|type=mRNA|length=5184bp
CGCGAGAGAAGAGGAACTTCCTGAACCGTCATCATTATTGAATCACTAGA
CCTGGAGACCTCTTCTCATCAGTCCCGCCCACCAACCTATGAGTTACCAC
GTCAGACAGGGCACCTCGGAGCACGTTGAAATTCCTCATTCCGGGCACAT
TTACTGTGCGTGCAGTCTACCCGTACCCCGGAAGTCGCTACCCTCGCCTC
TCAAAGCAGTTATGGAAGCAAACAATCTGACTCCCTCTAATAAATCATTA
ATTATAATACACAAGCTACAGGCACGTCAATACGCATAAAACATCGGGCC
ACGTTCCCTAGCGCAGGGAGTCAAGGTGCGAGCGTCATGATTCGGTCACT
GACCCGCAGTGCGAGCATCAGCAATAGGGTAGCGTCCGCGTCCTCCATCC
CTTTCTCAACATCGAGCTCCCCCAACACCCGTATTGCTGTCAGCACGTCC
TCAATCTGCTTGTCCCATCCGATTCCACCACTGCATCGGCATAACTCGTT
TTCTTGTACGCCGCTCTCTCTCGTCTCTCAAAGCAATCGAAGGGCCCTAA
GCATCGAGACGGAGCCACCGCCACCACCATCGGGCGGAAGCGACGGAACG
GCCGTGTCGGGAGATGGAGGGGCAGGGACGACATCGACTGAAACGGCGGC
GGCGGACAAGCCTCAACCCACGCCGGCCACGCCCGAGGTTGTGGCGGCGG
CTCTAAAGCCGAAAGAATTGGTCAAATACCTCGATCGGTATATCGTGGGG
CAGGCGGACGCCAAGCGGGCCGTCGCCATCGCGCTACGGAATCGTTGGCG
GCGGCACAAGCTGCCGGAGGACCTGCGGACGGAGATCATCCCTAAGAATA
TCCTGATGATTGGTCCCACGGGCTGTGGCAAGACGGAAATTGCACGGCGC
ATTGCGAAACTCTCGGACGCGCCTTTCATCAAAGTGGAGGCCACCAAGTT
CACGGAAGTTGGCTTCCACGGCCGCGACGTGGACCAGATCATCCGCGATT
TGGTGGAGATCTCGGTGAACATGACAAAAAAGCGGCGTAGTGAGGCCATC
AAGGCGGAGGCCCAGAAGGCGGTGGAGGAAAAGATCCTCCAGATACTGAC
GGGCCCCTATGCGCGAGACGACGCGAAGGAGACTTTCCGTGACCTGCTGC
GCAAGGGCAGCCTTAATGACCGGCTCGTCGACGTGGAGGTTCCTGCGGAC
CGGGGCAGTGCAGGGGGTGTATTCGACAAAGCGGGTGCAGGGCCGGGCAG
CGGGGCATTCGCTGAGAGCAACCCGAACGTTTCCATGGCGGACTTTATCG
GCAAGTTCTCGCGCGCCATTATGCCCAAACGTCCTATGGAGAAAAGAAAG
ATCCTGGTCAAGGAGGCAATGCCGCTGCTACTGGAGGTGGAAATGGAGAA
GCTTGTGGACATGTCGGACGTTACGCGGGAGGCCATTCAGTCAGTGGAGG
AGAGCGGCATTGTCTTCATCGACGAGATCGACAAGATCTGCAACCCCAGC
GACTACCGGGGCGCGGACGCCTCTGCGGAGGGCGTCCAACGGGACCTCCT
TCCGCTAATCGAGGGTTGTACCATCAGCACTAAGCACGGGAATGTGAACA
CGGACTACATCCTCTTCATATCATCGGGTGCCTTTCACCAGTGCAAGCCC
GCCGACCTGCTGGCCGAGCTGCAGGGTAGGCTGCCCATCCGGGTGGAGCT
TAAGGGCCTGACGGAGGATGACATGTACCGTATACTGACGGAGCCCATCA
CCAACCTCATCGCCCAGCAGGTAGCGTTACTCTCTACCGAAAAGGTAGCG
TTGGAATTCACGGACGAGGCTGTGCGGGAGATCGCGCGGGTTGCTGCCTT
GGTCAACAAGACTGTGGAGAACATTGGAGCGCGCCGCCTGCACACAGTGC
TGGAGCGTATTGTGGAGGAGATTTCTTTCGAGGCCTCGGACAAGGCCGAA
GGAGCCGTCATAACCGTGGACAAGGACCTCGTTCAGAGCCGCGTCAATGA
CCTCCTGGTCGAGTCTGATATCTCTAAGTACATCTTGTAAAAACAAAATA
GCGCGGTATTTTGCTTAGCCATGCTCACCACAATGTCTATACACTGCCTA
GCGTGTATGCCCCTCTTGACATGCCCCTCTTGAATAATGGGAAATAAGCA
GGAAAGGAATGCGAAGATGCCCCTTCATTGCAGCAGGGGGCCTCCGTTGT
GCGATTGGAAGGGTTTGAAAAGAAAGGTGGAGAGACGAGTGAAGGCAAAG
GTGAGGAAAGAACAACATTTGTGAAGCGATGTGCTGTGCGTTTCCTATTG
GTACCCAATTACTTGAATCAATCGGGAAAGGAAGCTTGGCCATCTGATTT
GGCAATGCTGTACGTGCAATTTTGTTACAACTCAAAATACGACAACAAGG
TTGTTTGTTGATATGTGTGGAACTTGCACGCGTACTGAATCTAAAGCACG
ACGAGCAGTGTCTGACTGGTTACTTCCTCCTCACCGTGGTGGGGATCTCA
CACATGTTGTTTCTTTCTTTTCCCTCGATGGCTCCACCCCCTGGTTTGGC
TGATGGTGATGAGGATTCTGCTGCAACTCTTCTTCTCTCTTTTCTGCTGC
TTTATGGTCTTGTCGCAGTGCCCCCCCTTGTTATCGTTCTTGCTGTACGA
GGGTTATGATGTTTCTTTCCCCCTACTTCTCGCCGCTTTTCTTCTATATT
TATGCACATCTCCTCACATGTATGGCTTACTGCCAATAAAGAGACAGCAT
TGGACTGGCTAGCAGCTGGCAAGTCGGGAAAGCGAGAAAGAGATGGACAG
GACGGCTGGTTCAGCTTTGCTGCTACCATCATCTCTTCCTCTCTGCTCAC
ACATCTACATAATCGACGCCCAATCTCTAAGTTTGCCTTTAATCGCTTTT
TGTCAATGAATTTCTTGTCTTACCTAATTACCATCCCTCCCTACATCGTC
TCTTCCCTTATTCGCATGTTCTTTGAGTTTGTTCCTTGTTTGTTTCACAC
GCATGTTCACATCGGCATGCCCTCGTTCTCCTTTCCGCTCCAGATTCGTC
TCCATCCCCGTATCCCTCTCTATTTTACCAAAACACCATTCTCATCGTCT
CTCCCCCTTCCCACTGTTTTAGGACATTCTGTTACATTATACCATACAGG
GAAGATGCGGACAAACGCACACATGGGCGCGCGTGGCCCTCACGCACTCT
CATCTACATCACATGCCTTGGAAACTAAAATTTCTCAGCGCCACCATGAT
AATCACTGGCGGTGTCTGTCTTTTGAAAATCAAGCCAGAAATCTAGCTCT
CGCGCCATCTGTTGTTTGTTCTATCGCTTATTGACACCATTATACCCATC
GCCATGTGAACTTGTCCTTCACTCTCTTCCAACCTGAGTGTTTTCCATAT
CATCCCTCCCTCCAGTTGAGCGTGTAAGTTTTTAACCAAGAGTTTAATTC
TCTTTCCGTGTCTCACTATTTTCTTCTCACAAATTACCCACATCACTTTC
TTAAGCTAATAATAACTCCGATACCTGCCCGATACCTGCAACAAAGAGAG
AAATGCCAAAATACCATTGTAATACCTCCACTTATTCGCCGGAATCGCTG
CGTTCCAAAGCTCGGCCACGAAAGCCGTGGCCACATTCTTATCAGTCGCC
GCCAAGGAAGCCACGGCATTCACTGCCACTAGCCCCACGGAGTGACTCTC
CGACATTGCCGTCCCATTCAACGAGTACGTAGATGGGTAGTCATGAATTC
CCTTCGAGAACAAGAACGCTTGTAATGTGTCCGCCTCCCGTTCTTGCCAG
GGATCGCGCCTCCACCACGACCAGTCCACAGCTAGATTAGCCACCACCCT
CCACGCGTCCCATTGAAAGTTGGAGTGCCCCAACAGGTCCTTTACCCCCA
CCCCATCAAAATCAGTGTAATCGGCTGCTAGCCCTGTGTGTCGGTTTGCG
GCCTTTCTCCACAGAATCCTGCTCTTGCTCGCTGCCATCAGGTAAAATGC
AGCCTCTTTTACTTGTCCTCTATCGGTCAAAAAACGCGCCCAGACCTCAT
AAAACTGAGGAAGGTGGTAAGACGGATTAGTAATGGTAGGCTGCACCGGA
TTCAGCGTCACTTCCCCTTTCTCACTGAACATGCCTCGCTGAGGGTCTGC
CATGGCAGCGAGTAGATTCAGTGCGTCCTTCTCGTAATTATACCTCCCTG
TAGACGACCACCTATTGTGCGCAAAGATCAGAGCTGTGGCGAACCACTCC
TCCCCATCCGGTGCTGGGGTTGGATCCATCTTCTGTCCAGCTAGTGAGCA
CTGCCACGCGAAAAAGTCCTTGTACTTGCCAGTGATGTGTTTCATGTAGC
GTGTCGACCAGGCCCACAAGGCGTCGAAGACCTCCTTCTTTTCAAACTGC
ACCGCCGCCATCATCCCATACGACATGGCCTCGCTCGTCACCCACCCACT
CTCCGTGTTGGTCATGTACCCCAATTTATCTCCTTCGGGCGTGGTACCCA
CAGGGAAATAGATGGCTTCGTTGATGGGGTTCCCCTCGAAAAGCAACCTC
CAGGTGTCTCCGAGCTTCTTGTCGATTTCTGCTTCGGATTTGTGTAGCAT
TTCCGAGAAGAGGTTCCGGTATTGACCGCCTTCGGCCGCGCCGAGCATGG
TGCCTGAATGACCGTGGGGGGCGATGAAAGGCTTGTTGTCCCAGGGGTCG
CCGCGGATATGGTGCTTTCCCGTATGGGACGGAAAGTAGACGGCGGCGAG
GATGATGCAGAGGGTGAGTATGACGAGGATAACCAGGGAGGAGAGGACCC
GTATTTGGTTTGCGCGGACGAAGCGGCGGGTTCTTTTTAAGACACTGACC
GCCGGCATTACCAAGGCATACCCTATCGAAACCAACACCCCTACTGCGTT
TGCCGCCCCTCGTTCCTCTGTCTCCTTCTCAAATTGACCCATATCCTGAA
ATGACGGCCTCTGGTGCAATGGATCTATCCCCACCATCACCTTGGACCCA
TCACTCTTCATCAACCCTTTCGTGCCGCCAAAGGAGACTGAATTCCACAT
CCCCGTGTCCTCGTCCAACATCATTCCACCTCCTCTTAACATGCTTTGCC
TCACTCTCTCCCCCTGATGCGCGGCTGCCGCCGCTGCAGCCGCGATGGCG
GCATTCGAAGGTCTGGAGGAAGGGTGGACACCGA

protein sequence of jgi.p|Nanoce1779_2|592380

>mRNA_5387-protein ID=mRNA_5387-protein|Name=jgi.p|Nanoce1779_2|592380|organism=Nannochloropsis oceanica|type=polypeptide|length=568bp
MIRSLTRSASISNRVASASSIPFSTSSSPNTRIAVSTSSICLSHPIPPLH
RHNSFSCTPLSLVSQSNRRALSIETEPPPPPSGGSDGTAVSGDGGAGTTS
TETAAADKPQPTPATPEVVAAALKPKELVKYLDRYIVGQADAKRAVAIAL
RNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKV
EATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKI
LQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAG
AGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLE
VEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGV
QRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLP
IRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIA
RVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQ
SRVNDLLVESDISKYIL*

mRNA from alignment at scaffold_13:312003..317549-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5387 ID=mRNA_5387|Name=jgi.p|Nanoce1779_2|592380|organism=Nannochloropsis oceanica|type=mRNA|length=5547bp|location=Sequence derived from alignment at scaffold_13:312003..317549- (Nannochloropsis oceanica)
CGCGAGAGAAGAGGAACTTCCTGAACCGTCATCATTATTGAATCACTAGA
CCTGGAGACCTCTTCTCATCAGTCCCGCCCACCAACCTATGAGTTACCAC
GTCAGACAGGGCACCTCGGAGCACGTTGAAATTCCTCATTCCGGGCACAT
TTACTGTGCGTGCAGTCTACCCGTACCCCGGAAGTCGCTACCCTCGCCTC
TCAAAGCAGTTATGGAAGCAAACAATCTGACTCCCTCTAATAAATCATTA
ATTATAATACACAAGCTACAGGCACGTCAATACGCATAAAACATCGGGCC
ACGTTCCCTAGCGCAGGGAGTCAAGGTGCGAGCGTCATGATTCGGTCACT
GACCCGCAGTGCGAGCATCAGCAATAGGGTAGCGTCCGCGTCCTCCATCC
CTTTCTCAACATCGAGCTCCCCCAACACCCGTATTGCTGTCAGCACGTCC
TCAATCTGCTTGTCCCATCCGATTCCACCACTGCATCGGCATAACTCGTT
TTCTTGTACGCCGCTCTCTCTCGTCTCTCAAAGCAATCGAAGGGCCCTAA
GCATCGAGACGGAGCCACCGCCACCACCATCGGGCGGAAGCGACGGAACG
GCCGTGTCGGGAGATGGAGGGGCAGGGACGACATCGACTGAAACGGCGGC
GGCGGACAAGCCTCAACCCACGCCGGCCACGCCCGAGGTTGTGGCGGCGG
CTCTAAAGCCGAAAGAATTGGTCAAATACCTCGATCGGTATATCGTGGGG
CAGGCGGACGCCAAGCGGGCCGTCGCCATCGCGCTACGGAATCGTTGGCG
GCGGCACAAGCTGCCGGAGGACCTGCGGACGGAGATCATCCCTAAGAATA
TCCTGATGATTGGTCCCACGGGCTGTGGCAAGACGGAAATTGCACGGCGC
ATTGCGAAACTCTCGGACGCGCCTTTCATCAAAGTGGAGGCCACCAAGTT
CACGGAAGTTGGCTTCCACGGCCGCGACGTGGACCAGATCATCCGCGATT
TGGTGGAGATCTCGGTGAACATGACAAAAAAGCGGCGTAGTGAGGCCATC
AAGGCGGAGGCCCAGAAGGCGGTGGAGGAAAAGATCCTCCAGATACTGAC
GGGCCCCTATGCGCGAGACGACGCGAAGGAGACTTTCCGTGACCTGCTGC
GCAAGGGCAGCCTTAATGACCGGCTCGTCGACGTGGAGGTTCCTGCGGAC
CGGGGCAGTGCAGGGGGTGTATTCGACAAAGCGGGTGCAGGGCCGGGCAG
CGGGGCATTCGCTGAGAGCAACCCGAACGTTTCCATGGCGGACTTTATCG
GCAAGTTCTCGCGCGCCATTATGCCCAAACGTCCTATGGAGAAAAGAAAG
ATCCTGGTCAAGGAGGCAATGCCGCTGCTACTGGAGGTGGAAATGGAGAA
GCTTGTGGACATGTCGGACGTTACGCGGGAGGCCATTCAGTCAGTGGAGG
AGAGCGGCATTGTCTTCATCGACGAGATCGACAAGATCTGCAACCCCAGC
GACTACCGGGGCGCGGACGCCTCTGCGGAGGGCGTCCAACGGGACCTCCT
TCCGCTAATCGAGGGTTGTACCATCAGCACTAAGCACGGGAATGTGAACA
CGGACTACATCCTCTTCATATCATCGGGTGCCTTTCACCAGTGCAAGCCC
GCCGACCTGCTGGCCGAGCTGCAGGGTAGGCTGCCCATCCGGGTGGAGCT
TAAGGGCCTGACGGAGGATGACATGTACCGTATACTGACGGAGCCCATCA
CCAACCTCATCGCCCAGCAGGTAGCGTTACTCTCTACCGAAAAGGTAGCG
TTGGAATTCACGGACGAGGCTGTGCGGGAGATCGCGCGGGTTGCTGCCTT
GGTCAACAAGACTGTGGAGAACATTGGAGCGCGCCGCCTGCACACAGTGC
TGGAGCGTATTGTGGAGGAGATTTCTTTCGAGGCCTCGGACAAGGCCGAA
GGAGCCGTCATAACCGTGGACAAGGACCTCGTTCAGAGCCGCGTCAATGA
CCTCCTGGTCGAGTCTGATATCTCTAAGTACATCTTGTAAAAACAAAATA
GCGCGGTATTTTGCTTAGCCATGCTCACCACAATGTCTATACACTGCCTA
GCGTGTATGCCCCTCTTGACATGCCCCTCTTGAATAATGGGAAATAAGCA
GGAAAGGAATGCGAAGATGCCCCTTCATTGCAGCAGGGGGCCTCCGTTGT
GCGATTGGAAGGGTTTGAAAAGAAAGGTGGAGAGACGAGTGAAGGCAAAG
GTGAGGAAAGAACAACATTTGTGAAGCGATGTGCTGTGCGTTTCCTATTG
GTACCCAATTACTTGAATCAATCGGGAAAGGAAGCTTGGCCATCTGATTT
GGCAATGCTGTACGTGCAATTTTGTTACAACTCAAAATACGACAACAAGG
TTGTTTGTTGATATGTGTGGAACTTGCACGCGTACTGAATCTAAAGCACG
ACGAGCAGTGTCTGACTGGTTACTTCCTCCTCACCGTGGTGGGGATCTCA
CACATGTTGTTTCTTTCTTTTCCCTCGATGGCTCCACCCCCTGGTTTGGC
TGATGGTGATGAGGATTCTGCTGCAACTCTTCTTCTCTCTTTTCTGCTGC
TTTATGGTCTTGTCGCAGTGCCCCCCCTTGTTATCGTTCTTGCTGTACGA
GGGTTATGATGTTTCTTTCCCCCTACTTCTCGCCGCTTTTCTTCTATATT
TATGCACATCTCCTCACATGTATGGCTTACTGCCAATAAAGAGACAGCAT
TGGACTGGCTAGCAGCTGGCAAGTCGGGAAAGCGAGAAAGAGATGGACAG
GACGGCTGGTTCAGCTTTGCTGCTACCATCATCTCTTCCTCTCTGCTCAC
ACATCTACATAATCGACGCCCAATCTCTAAGTTTGCCTTTAATCGCTTTT
TGTCAATGAATTTCTTGTCTTACCTAATTACCATCCCTCCCTACATCGTC
TCTTCCCTTATTCGCATGTTCTTTGAGTTTGTTCCTTGTTTGTTTCACAC
GCATGTTCACATCGGCATGCCCTCGTTCTCCTTTCCGCTCCAGATTCGTC
TCCATCCCCGTATCCCTCTCTATTTTACCAAAACACCATTCTCATCGTCT
CTCCCCCTTCCCACTGTTTTAGGACATTCTGTTACATTATACCATACAGG
GAAGATGCGGACAAACGCACACATGGGCGCGCGTGGCCCTCACGCACTCT
CATCTACATCACATGCCTTGGAAACTAAAATTTCTCAGCGCCACCATGAT
AATCACTGGCGGTGTCTGTCTTTTGAAAATCAAGCCAGAAATCTAGCTCT
CGCGCCATCTGTTGTTTGTTCTATCGCTTATTGACACCATTATACCCATC
GCCATGTGAACTTGTCCTTCACTCTCTTCCAACCTGAGTGTTTTCCATAT
CATCCCTCCCTCCAGTTGAGCGTGTAAGTTTTTAACCAAGAGTTTAATTC
TCTTTCCGTGTCTCACTATTTTCTTCTCACAAATTACCCACATCACTTTC
TTAAGCTAATAATAACTCCGATACCTGCCCGATACCTGCAACAAAGAGAG
AAATGCCAAAATACCATTGTAATACCTCCACTTATTCGCCGGAATCGCTG
CGTTCCAAAGCTCGGCCACGAAAGCCGTGGCCACATTCTTATCAGTCGCC
GCCAAGGAAGCCACGGCATTCACTGCCACTAGCCCCACGGAGTGACTCTC
CGACATTGCCGTCCCATTCAACGAGTACGTAGATGGGTAGTCATGAATTC
CCTTCGAGAACAAGAACGCTTGTAATGTGTCCGCCTCCCGTTCTTGCCAG
GGATCGCGCCTCCACCACGACCAGTCCACAGCTAGATTAGCCACCACCCT
CCACGCGTCCCATTGAAAGTTGGAGTGCCCCAACAGGTCCTTTACCCCCA
CCCCATCAAAATCAGTGTAATCGGCTGCTAGCCCTGTGTGTCGGTTTGCG
GCCTTTCTCCACAGAATCCTGCTCTTGCTCGCTGCCATCAGGTAAAATGC
AGCCTCTTTTACTTGTCCTCTATCGGTCAAAAAACGCGCCCAGACCTCAT
AAAACTGAGGAAGGTGGTAAGACGGATTAGTAATGGTAGGCTGCACCGGA
TTCAGCGTCACTTCCCCTTTCTCACTGAACATGCCTCGCTGAGGGTCTGC
CATGGCAGCGAGTAGATTCAGTGCGTCCTTCTCGTAATTATACCTCCCTG
TAGACGACCACCTATTGTGCGCAAAGATCAGAGCTGTGGCGAACCACTCC
TCCCCATCCGGTGCTGGGGTTGGATCCATCTTCTGTCCAGCTAGTGAGCA
CTGCCACGCGAAAAAGTCCTTGTACTTGCCAGTGATGTGTTTCATGTAGC
GTGTCGACCAGGCCCACAAGGCGTCGAAGACCTCCTTCTTTTCAAACTGC
ACCGCCGCCATCATCCCATACGACATGGCCTCGCTCGTCACCCACCCACT
CTCCGTGTTGGTCATGTACCCCAATTTATCTCCTTCGGGCGTGGTACCCA
CAGGGAAATAGATGGCTTCGTTGATGGGGTTCCCCTCGAAAAGCAACCTC
CAGGTGTCTCCGAGCTTCTTGTCGATTTCTGCTTCGGATTTGTGTAGCAT
TTCCGAGAAGAGGTTCCGGTATTGACCGCCTTCGGCCGCGCCGAGCATGG
TGCCTTGGGGGGGAGGGAAGGGGGAAGGAAGGGGGAAGGGAAGGGAAATT
TCAAGAAAGAAGAGCTACCGAATATATATATATATATATATATATATATA
TATGGCAAGCGAGTGGGCAGGAGATGGTCGTTTCACAGGCAAGGCAACAA
AACACGTCTCTAAATCCAACAGCGGCGGCAATAGCTACACATATTGGGAA
TTTATAGGAACTCCTCCCTACCTGAATGACCGTGGGGGGCGATGAAAGGC
TTGTTGTCCCAGGGGTCGCCGCGGATATGGTGCTTTCCCGTATGGGACGG
AAAGTAGACGGCGGCGAGGATGATGCAGAGGGTGAGTATGACGAGGATAA
CCAGGGAGGAGAGGACCCGTATTTGGTTTGCGCGGACGAAGCGGCGGGTT
CTTTTTAAGACACTGTGAGCATCAAGCACGAAATAAACCAAAGCGAAGAT
TGAAGGCGTGCATTAATGAGGTGGTGAATGAGATCATCGACTGTAGTAGC
GCTGCCTCCCCTTCCCTTTACATCTTCCCTCCCGTCCTGACCCAATAAAA
GACGTACCTGACCGCCGGCATTACCAAGGCATACCCTATCGAAACCAACA
CCCCTACTGCGTTTGCCGCCCCTCGTTCCTCTGTCTCCTTCTCAAATTGA
CCCATATCCTGAAATGACGGCCTCTGGTGCAATGGATCTATCCCCACCAT
CACCTTGGACCCATCACTCTTCATCAACCCTTTCGTGCCGCCAAAGGAGA
CTGAATTCCACATCCCCGTGTCCTCGTCCAACATCATTCCACCTCCTCTT
AACATGCTTTGCCTCACTCTCTCCCCCTGATGCGCGGCTGCCGCCGCTGC
AGCCGCGATGGCGGCATTCGAAGGTCTGGAGGAAGGGTGGACACCGA

Coding sequence (CDS) from alignment at scaffold_13:312003..317549-

>mRNA_5387 ID=mRNA_5387|Name=jgi.p|Nanoce1779_2|592380|organism=Nannochloropsis oceanica|type=CDS|length=1704bp|location=Sequence derived from alignment at scaffold_13:312003..317549- (Nannochloropsis oceanica)
ATGATTCGGTCACTGACCCGCAGTGCGAGCATCAGCAATAGGGTAGCGTC
CGCGTCCTCCATCCCTTTCTCAACATCGAGCTCCCCCAACACCCGTATTG
CTGTCAGCACGTCCTCAATCTGCTTGTCCCATCCGATTCCACCACTGCAT
CGGCATAACTCGTTTTCTTGTACGCCGCTCTCTCTCGTCTCTCAAAGCAA
TCGAAGGGCCCTAAGCATCGAGACGGAGCCACCGCCACCACCATCGGGCG
GAAGCGACGGAACGGCCGTGTCGGGAGATGGAGGGGCAGGGACGACATCG
ACTGAAACGGCGGCGGCGGACAAGCCTCAACCCACGCCGGCCACGCCCGA
GGTTGTGGCGGCGGCTCTAAAGCCGAAAGAATTGGTCAAATACCTCGATC
GGTATATCGTGGGGCAGGCGGACGCCAAGCGGGCCGTCGCCATCGCGCTA
CGGAATCGTTGGCGGCGGCACAAGCTGCCGGAGGACCTGCGGACGGAGAT
CATCCCTAAGAATATCCTGATGATTGGTCCCACGGGCTGTGGCAAGACGG
AAATTGCACGGCGCATTGCGAAACTCTCGGACGCGCCTTTCATCAAAGTG
GAGGCCACCAAGTTCACGGAAGTTGGCTTCCACGGCCGCGACGTGGACCA
GATCATCCGCGATTTGGTGGAGATCTCGGTGAACATGACAAAAAAGCGGC
GTAGTGAGGCCATCAAGGCGGAGGCCCAGAAGGCGGTGGAGGAAAAGATC
CTCCAGATACTGACGGGCCCCTATGCGCGAGACGACGCGAAGGAGACTTT
CCGTGACCTGCTGCGCAAGGGCAGCCTTAATGACCGGCTCGTCGACGTGG
AGGTTCCTGCGGACCGGGGCAGTGCAGGGGGTGTATTCGACAAAGCGGGT
GCAGGGCCGGGCAGCGGGGCATTCGCTGAGAGCAACCCGAACGTTTCCAT
GGCGGACTTTATCGGCAAGTTCTCGCGCGCCATTATGCCCAAACGTCCTA
TGGAGAAAAGAAAGATCCTGGTCAAGGAGGCAATGCCGCTGCTACTGGAG
GTGGAAATGGAGAAGCTTGTGGACATGTCGGACGTTACGCGGGAGGCCAT
TCAGTCAGTGGAGGAGAGCGGCATTGTCTTCATCGACGAGATCGACAAGA
TCTGCAACCCCAGCGACTACCGGGGCGCGGACGCCTCTGCGGAGGGCGTC
CAACGGGACCTCCTTCCGCTAATCGAGGGTTGTACCATCAGCACTAAGCA
CGGGAATGTGAACACGGACTACATCCTCTTCATATCATCGGGTGCCTTTC
ACCAGTGCAAGCCCGCCGACCTGCTGGCCGAGCTGCAGGGTAGGCTGCCC
ATCCGGGTGGAGCTTAAGGGCCTGACGGAGGATGACATGTACCGTATACT
GACGGAGCCCATCACCAACCTCATCGCCCAGCAGGTAGCGTTACTCTCTA
CCGAAAAGGTAGCGTTGGAATTCACGGACGAGGCTGTGCGGGAGATCGCG
CGGGTTGCTGCCTTGGTCAACAAGACTGTGGAGAACATTGGAGCGCGCCG
CCTGCACACAGTGCTGGAGCGTATTGTGGAGGAGATTTCTTTCGAGGCCT
CGGACAAGGCCGAAGGAGCCGTCATAACCGTGGACAAGGACCTCGTTCAG
AGCCGCGTCAATGACCTCCTGGTCGAGTCTGATATCTCTAAGTACATCTT
GTAA

Synonyms

Publications