jgi.p|Nanoce1779_2|670351, gene_4183 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670351
Unique Namegene_4183
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:1056103..1060824 +

Link to JBrowse

Properties
Property NameValue
TranscriptId670437
ProteinId670351
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:1056103..1060824 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00360NO10G00360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670351mRNA_4183-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670351mRNA_4183Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670351

>mRNA_4183-protein ID=mRNA_4183-protein|Name=jgi.p|Nanoce1779_2|670351|organism=Nannochloropsis oceanica|type=polypeptide|length=1191bp
MLLAQCYALFVGGSSTGNEGEEEEEEEEQQQQQEAVATAKNSVDNLSQIP
RRLHILSALIFSRLLLRKKPWFQLTDLKTHCPESRSSDWLYSHACFIYHD
LARAGLVLEGWSEKGKEDEGLVMLGGTEEIKEGEGRVKGIDEYLMPALST
LLKADLLALAKALGVPRSSSFSSFSSSSSSSSSSSSSSSSSSFTTTSSSS
SSSSSTSSTALPRGKKAKGGREGRPIQEERSGGGGAPPVLFRICPQMLRF
LQRLLRLVVGAGGAEGEREGGREGGREGRKVQEGRREGGPWSSRRVFEQW
ELSIEMRWLMAELLEEWREERRREEEEHEEEEEEEEKRKEEGRRREGGGQ
KERRRKAKGKENADMKNTGEGTRERADRKEKEVIEILDDSEEEKAGEEGV
MVFVDENKRWNDVAADEEEEEQEEEEEEEEEEEEEEEEEEKAVEMVVVAS
DEEEEKKKGARKPAAADAAVTRELLRRFLDLRAEACPAAATTSTTAAVAP
APAPAPAPADGCGGISLLDEDEDEDEGGREGREEEEEEGKKGEREDKDVR
EEGEMPMLLHPGHTLSSLLLDVLLEGGGGEEGLERDLCACAVHDPFVPGG
GLMVLRRRLVKLEERISREGGREGAKKEEEEKNLSTGIVKVRVEGGGGGR
ELQRKRGRKRGKVQRWMTRRTAFNEVEHVMREVDEEEEEEEEEEDEERKN
FETGSISSSSSSPSSNNNELIEGRAKAGGQAGRKAVFTLGNDGEGRVEEM
VLQEQRERRGYWGVHCEGRFLRTLFGLFFWEHGLFPPSAAGAESLSSPPY
SSSSTAATRGSSSRKTSSTRKDTGNSGSSCHNSCHNSSSGSSQLSLSSPS
SSSSSSFFSPFQDAPLDLEHPPGLFYARRASLLEARLHALSLLDGPSLAA
SLHASYLKHYPLRCRGVQWWEGGREGGRGGLPLELLQVVVVGMGGRGLAA
ALRPLVGEYRYYSGGLPDLLLVRVVREGGREGGTGEKEGGERKEMVEKQN
RERGMKVNGGNKTKRRKGKGRGRKTKDKEEEEEEEEEEEEEERGGGMEAW
DGVENLSKLTGLPVWVLDRVANRGGGGGEGGGGGGRARRGGGGFPWLDPK
TNEIWPPPEEDGEREEEGWRRVPKLLTTEELKGWRCEVVLGEVKSENDRL
DPRQEAWLHILTAGGVEAKVMQVRTPGRRRKGGKKRRAGR*
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Synonyms
Publications