|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr10 | genome | chr10:127670..131906 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0036297 | interstrand cross-link repair |
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis |
| GO:0036297 | interstrand cross-link repair |
| GO:0006974 | cellular response to DNA damage stimulus |
| GO:0006281 | DNA repair |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR033315 | Fan1-like |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Homology
BLAST of NO10G00360 vs. NCBI_GenBank
Match: XP_005828993.1 (hypothetical protein GUITHDRAFT_45708, partial [Guillardia theta CCMP2712] >EKX42013.1 hypothetical protein GUITHDRAFT_45708, partial [Guillardia theta CCMP2712]) HSP 1 Score: 81.6 bits (200), Expect = 2.000e-11 Identity = 64/229 (27.95%), Postives = 88/229 (38.43%), Query Frame = 0
Query: 1100 VEEMVLQE-QRERRGYW-GVHCEGRFLRTLFGLFFWEHGLFPPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQDAPLDLEHPPGLFYARRASLLEARLHALSLLDGPSLAASLHASYLKHYPLRCRGVQWWEGGREGGRGGLPLELLQVVVVGMGGRGLAAALRPLVGEYRYYSGGLPDLLLVR 1327
VEE+ +Q ++E RG W G+HCEG LR LF L FW+ FQDAP+DL+ P FY RR +L+ AR+ L L L L + + + CRG W G L LQ+V + +GGR ++A R L YR++SGG+PDL+L+R
Sbjct: 3 VEELAMQHYEQEERGRWKGIHCEGSPLRFLFSLLFWD-----------------------------------------------------------------VIFSSDVPDAFLTPFQDAPIDLDFHP-FFYKRREALILARIADLELWSDQQLLLELRERWQQSFGTLCRGASW---------GSCSLSFLQLVALCLGGRRISAICRALCINYRHFSGGMPDLVLLR 156
BLAST of NO10G00360 vs. NCBI_GenBank
Match: CBJ26014.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.3 bits (168), Expect = 1.000e-7 Identity = 76/287 (26.48%), Postives = 105/287 (36.59%), Query Frame = 0
Query: 1074 IEGRAKAGGQAGRKAVFTLGNDGEG-RVEEMVLQ--EQRERRGYWGVHCEGRFLRTLFGLFFWEHGLFPPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQDAPLDLEHPPGLFYARRASLLEARLHALSLLDGPSLAASLHASYLKHYPLRCRGVQWWEGGREGGRGGLPLELLQVVVVGMGGRGLAAALRPLVGEYRYYSGGLPDLLLVRVVREGGREGGQERKKEGRGRRWWRNKTGEGA 1358
I GR + + G K+ F DG VE +VLQ QRE + G HCEG LR+L+ L W+ +F P FQDAPLDL+ P LFY R + ++ RL L L A + ++L + CRG+ W + LQ + G+GG +AA L L ++++ GGLPDLLL+R VR EGR + + K A
Sbjct: 3 ITGR-RLNREIGAKSRFVGYGDGAACTVEALVLQHLSQREEGSWAGWHCEGSPLRSLWALLMWD-VIFSPGV----------------------------------------------------------------ADVFQTPFQDAPLDLDFCP-LFYLNRRTAVDTRLAELRAASAAELVALVGDAWLANAGTVCRGLNWDRSS---------VRHLQAIAAGLGGPAMAAILAALCLNHKHFGGGLPDLLLMRAVRTDTNAAAVAAAGEGRDGKIAKGKAAAEA 213
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00360 ID=NO10G00360|Name=NO10G00360|organism=Nannochloropsis oceanica|type=gene|length=4237bp
ATGACGACCATTCTTGCACCACGCGGCGTCACCTGGCCCTCCTCCTTCTC
CTCCTCCCCCCACCCTTCCACACGCCTTGCCCACGACCCCCACCAAGACA
TTCCCTTACAGCACTTGCGTTGGTGCATCGCCGTGGTCAGACACACACCC
TCCTTGTCACGCCTAGTGGATTCAATGCTGCTAGCGCAGTGCTATGCTCT
CTTTGTTGGTGGTAGCAGTACCGGAAACGAGGGAGAGGAGGAGGAGGAGG
AGGAGGAGCAGCAGCAGCAGCAGGAGGCGGTGGCTACAGCCAAAAATAGC
GTAGACAATCTCTCTCAAATTCCTCGTCGCTTACACATTCTCTCCGCGCT
GATCTTCTCCCGTCTCCTCTTACGAAAGAAGCCCTGGTTCCAACTGACTG
ACCTCAAGACACATTGTCCCGAGAGCCGATCAAGTGACTGGTTGTACTCT
CACGCCTGCTTCATATACCACGACCTAGCACGGGCAGGATTAGTGCTGGA
GGGATGGAGCGAGAAAGGAAAGGAGGACGAGGGGTTGGTGATGCTGGGAG
GGACGGAGGAAATAAAGGAGGGTGAAGGGAGGGTGAAGGGTATAGATGAA
TATCTCATGCCTGCCCTGAGCACACTATTGAAAGCCGACTTGCTCGCACT
GGCCAAAGCATTAGGCGTACCCCGTTCCTCCTCCTTCTCCTCCTTCTCCT
CTTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCTTCCTCCTCCTCTTCC
TCCTTCACCACTACCTCCTCTTCCTCCTTGTCTTCTTCGTCCTCTACCTC
GTCCACCGCGCTAGTCTCGCTCGACAAACCCTCCCTCCTTCTCGCCCTAC
GCCGACGCATTATCTCCTTCCACTCCTCTCCCCCTCCCTCCTCCCGAATC
TCTTCTACCCGCCCTTGTCCTCCTTCAGTCGAAGACGCTGTCCGCAGGGT
CCTCTTGTCCAGGTGGCTCAGGCACGAACACGCAATCCCCCACAACCTCC
TCCAGCCTAGAGGCAAGAAAGCCAAGGGAGGGAGGGAGGGCAGGCCTATT
CAAGAAGAAAGGTCGGGAGGTGGAGGGGCGCCCCCAGTCCTTTTTCGCAT
TTGTCCTCAGATGCTGCGGTTTCTTCAGCGGCTGCTTCGATTGGTTGTAG
GGGCAGGAGGAGCAGAGGTAGGCTCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCTTCCCTCCCTCCTTCTCCGCCTCTTCGGCGATTAT
CTCGGTGTTGCCTTCGCCGGCCTTGATGTGGTTGTATGGGAAATGGAACT
TTCACCCCTTGCCGGGGGAGGGCGAGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAAGGAAGGAAGGTTCAGGAGGGAAGGAGGGAAGGAGGGCCGTGGTC
GTCGAGGAGGGTATTCGAGCAGTGGGAGTTGAGCATCGAAATGAGATGGC
TAATGGCCGAGCTTCTGGAAGAATGGAGGGAGGAGAGGAGGAGGGAGGAG
GAGGAGCATGAGGAGGAGGAGGAGGAGGAGGAGAAGAGGAAGGAGGAGGG
GCGGAGAAGGGAAGGAGGAGGGCAGAAGGAGAGGAGGAGGAAAGCGAAGG
GGAAGGAGAATGCGGACATGAAGAATACGGGAGAGGGGACGAGGGAAAGG
GCAGACAGGAAAGAGAAAGAGGTGATTGAAATTCTGGATGATAGCGAGGA
GGAGAAGGCAGGGGAGGAGGGGGTGATGGTGTTCGTGGATGAGAATAAGC
GGTGGAACGATGTAGCGGCTGATGAGGAGGAGGAGGAGCAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAAGAAAAAGCTGT
GGAAATGGTGGTGGTGGCCAGTGATGAGGAAGAGGAGAAGAAGAAAGGAG
CACGGAAGCCAGCAGCTGCTGACGCTGCTGTGACTAGAGAGCTTCTGCGA
CGCTTCCTAGACCTGCGTGCCGAGGCCTGCCGTAGTTTTGGCCTGAAGGA
GCCGCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCACCC
TCGCTCTCCTCCAGGCATTGCTTCATCTCGCGGCGCGCTGTATCCTCACT
CTCCTTCCTCCTCCTTTTCTTCCTCCTCCATCTTCTCCTCCTGCTCTTCC
GTCTAAAGCTGCTGCTGCTACTACTTCTACGACTGCTGCCGTTGCTCCTG
CTCCTGCTCCTGCTCCTGCTCCTGCTGATGGATGTGGTGCCGGTGCTAAT
TGGGAGGAGCGACTTCCTCCTCTTTCTCCTTCTTCCTCTTCTTTTCTCCC
TCCTTCCCTCCCTCCTTGGGCCGTCGCACGCCATTTGCTATTCAAAGGAG
GCATTTCCCTCCTCGATGAGGACGAGGACGAGGATGAGGGAGGGAGGGAA
GGCCGGGAGGAAGAAGAGGAGGAAGGGAAAAAGGGCGAGAGGGAGGACAA
GGACGTGAGGGAGGAAGGGGAGATGCCGATGCTTCTCCACCCGGGCCACA
CGCTAAGCAGCTTACTGTTAGATGTGCTGTTAGAGGGGGGAGGGGGAGAG
GAAGGGGTAGGGAGGGAGGAACGGCTGTCGTTGCTGCTGCTGCTGCTGGG
CGTACCGTGGAGAAGGGATAGGAGGGGGCATGTGTGGGTGGCCCTGGTGA
GGGGGGTGAAAGCGATGAGGAGGGAGGAAGGAGGGAAAGAAAAATGGCGG
GAGAGCGATGATGAAGAAGTAGAAGAGAAAGAAGTAAGGAGGGGTAAGAT
CACTCTTTCTGCCTCCTCCTCACCCTCTTTTTCGTCCTCGTCTCTGCAGC
TGGAGCGTGATTTATGTGCGTGTGCGGTGCATGATCCCTTTGTGCCCGGG
GGGGGTCTGATGGTGCTGAGGAGGAGGTTGATGAAGTTGGAGGAGAGGAT
AGGGAGGGAGGGAGGGAGGGAGGGGGCGAAGAAGGAGGAGGAGGAGAAGA
ACTTGTCAACGGGTATTGTGAAAGTGAGAGTGGAAGGGGGAGGAGGAGGA
AGGGAGCTGCAGAGGAAGCGAGGGAGGAAGCGAGGGAAGGTGCAACGGTG
GGTGACGAGGAGGACGGCTTTTAATGAGGTGGAGCATGTAATGCGTGAGG
TAGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAAGAG
AGGAAGAACTTCGAGACTGGCAGCATCTCCTCCTCCTCTTCCTCCCCCTC
CTCTAACAACAATGgtggatggactacccccctctcctctccttcccccc
tccttccctccctcctccctttgactccaccatcacaccagctccctccc
tccctccctccctccctccctctccctcgtgggcgtgtcttggcctcgag
atggccaaccacgcatcggcaaaacagAATTGATCGAAGGGCGGGCAAAG
GCGGGAGGGCAGGCGGGAAGGAAGGCAGTCTTCACCCTGGGTAATGATGG
GGAGGGACGGGTGGAGGAGATGGTCCTACAAGAGCAGAGAGAACGAAGGG
GATATTGGGGCGTGCATTGCGAGGGCCGCTTCCTAAGGACGTTGTTTGGT
TTGTTCTTCTGGGAGCATGGGCTCTTCCCTCCCTCGGCAGCTGGCGCTGA
GTCCTTGTCTTCCCCCCCGTACTCGTCCTCCTCTACTGCAGCCACACGTG
GCAGCAGCAGCCGCAAGACAAGCAGCACCAGGAAGGATACTGGTAACAGC
GGCAGCAGCTGTCACAACAGCTGTCACAACAGCAGTAGTGGCTCCTCCCA
GCTGTCTTTATCCTCCCCCTCGTCCTCCTCCTCATCCTCCTTCTTCTCCC
CCTTCCAAGACGCTCCTCTCGACTTGGAGCATCCTCCGGGTCTCTTTTAC
GCTCGTCGCGCCTCCCTCCTTGAAGCTCGCCTTCACGCTCTCTCCCTTCT
TGACGGTCCTTCCCTCGCTGCCTCCCTCCATGCCTCGTACCTCAAGCACT
ACCCCCTCCGATGTAGGGGCGTCCAGTGGTGGGAGGGAGGGAGGGAGGGA
GGGAGGGGAGGGCTACCCCTGGAGCTGCTGCAGGTGGTGGTGGTAGGGAT
GGGGGGGAGGGGGCTGGCGGCGGCGTTGAGGCCTTTGGTTGGCGAGTATC
GATATTACAGTGGGGGACTGCCTGATTTGTTGCTGGTGAGGGTGGTGAGG
GAGGGAGGGAGGGAGGGGGGACAGGAGAGAAAGAAGGAGGGGAGAGGAAG
GAGATGGTGGAGAAACAAAACAGGGGAAGGGGCATGA back to topprotein sequence of NO10G00360.1 >NO10G00360.1-protein ID=NO10G00360.1-protein|Name=NO10G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1358bp
MTTILAPRGVTWPSSFSSSPHPSTRLAHDPHQDIPLQHLRWCIAVVRHTP
SLSRLVDSMLLAQCYALFVGGSSTGNEGEEEEEEEEQQQQQEAVATAKNS
VDNLSQIPRRLHILSALIFSRLLLRKKPWFQLTDLKTHCPESRSSDWLYS
HACFIYHDLARAGLVLEGWSEKGKEDEGLVMLGGTEEIKEGEGRVKGIDE
YLMPALSTLLKADLLALAKALGVPRSSSFSSFSSSSSSSSSSSSSSSSSS
SFTTTSSSSLSSSSSTSSTALVSLDKPSLLLALRRRIISFHSSPPPSSRI
SSTRPCPPSVEDAVRRVLLSRWLRHEHAIPHNLLQPRGKKAKGGREGRPI
QEERSGGGGAPPVLFRICPQMLRFLQRLLRLVVGAGGAEVGSSLPPSLPP
SLPPSFPPSFSASSAIISVLPSPALMWLYGKWNFHPLPGEGEREGGREGG
REGRKVQEGRREGGPWSSRRVFEQWELSIEMRWLMAELLEEWREERRREE
EEHEEEEEEEEKRKEEGRRREGGGQKERRRKAKGKENADMKNTGEGTRER
ADRKEKEVIEILDDSEEEKAGEEGVMVFVDENKRWNDVAADEEEEEQEEE
EEEEEEEEEEEEEEKAVEMVVVASDEEEEKKKGARKPAAADAAVTRELLR
RFLDLRAEACRSFGLKEPPSFPPSLPPSLPPTTLALLQALLHLAARCILT
LLPPPFLPPPSSPPALPSKAAAATTSTTAAVAPAPAPAPAPADGCGAGAN
WEERLPPLSPSSSSFLPPSLPPWAVARHLLFKGGISLLDEDEDEDEGGRE
GREEEEEEGKKGEREDKDVREEGEMPMLLHPGHTLSSLLLDVLLEGGGGE
EGVGREERLSLLLLLLGVPWRRDRRGHVWVALVRGVKAMRREEGGKEKWR
ESDDEEVEEKEVRRGKITLSASSSPSFSSSSLQLERDLCACAVHDPFVPG
GGLMVLRRRLMKLEERIGREGGREGAKKEEEEKNLSTGIVKVRVEGGGGG
RELQRKRGRKRGKVQRWVTRRTAFNEVEHVMREVDEEEEEEEEEEEEDEE
RKNFETGSISSSSSSPSSNNNELIEGRAKAGGQAGRKAVFTLGNDGEGRV
EEMVLQEQRERRGYWGVHCEGRFLRTLFGLFFWEHGLFPPSAAGAESLSS
PPYSSSSTAATRGSSSRKTSSTRKDTGNSGSSCHNSCHNSSSGSSQLSLS
SPSSSSSSSFFSPFQDAPLDLEHPPGLFYARRASLLEARLHALSLLDGPS
LAASLHASYLKHYPLRCRGVQWWEGGREGGRGGLPLELLQVVVVGMGGRG
LAAALRPLVGEYRYYSGGLPDLLLVRVVREGGREGGQERKKEGRGRRWWR
NKTGEGA* back to top
|