jgi.p|Nanoce1779_2|593992, gene_6165 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593992
Unique Namegene_6165
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:679216..680518 -

Link to JBrowse

Properties
Property NameValue
TranscriptId594078
ProteinId593992
Product nameFatty acid desaturase
Portal idNanoce1779_2
Mutants
The following records are associated with this feature:
TitleMethodAccession dateLast modified date
delta-5 fatty acid desaturasesOverexpression2019-05-102020-04-01
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:679216..680518 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02680NO16G02680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593992mRNA_6165-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593992mRNA_6165Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593992

>mRNA_6165-protein ID=mRNA_6165-protein|Name=jgi.p|Nanoce1779_2|593992|organism=Nannochloropsis oceanica|type=polypeptide|length=301bp
MHDSSHLAFGNTERWWQMGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVF
MADPDLPDKSAGDPRRLVKKQAWEGMYKWQHLYLPPLYGILGIKFRVQDV
METYGSGSNGPVRVNPLSPWQWGEMIFTKLFWFGWRVVFPLMSASFRTSM
ATFWPLFFVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREEAVEGSAGG
KEGIKDEWAVSQVKSSVDYAHNNALTTFLCGALNYQVTHHLFPTVSQYHY
PKIAPIIQEVCKEFNVDYKVLPDFVTAFHAHIAHLKALGERGEAAEVHMG
*
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Synonyms
Publications