jgi.p|Nanoce1779_2|218174, gene_8746 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|218174
Unique Namegene_8746
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_28:21960..25296 +

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Properties
Property NameValue
TranscriptId218260
ProteinId218174
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_28supercontigscaffold_28:21960..25296 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL045ncniL045Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01450NO25G01450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|218174mRNA_8746-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|218174mRNA_8746Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|218174

>mRNA_8746-protein ID=mRNA_8746-protein|Name=jgi.p|Nanoce1779_2|218174|organism=Nannochloropsis oceanica|type=polypeptide|length=983bp
MMLAWKEKDDPQELQQLKRKDKEEEDSSSTVQAAVVRLRDLHLEGADDSE
VEGEQEETDCKHDKVEVTHSTAAVHTRGRPGQKNEGVGPSPDAEKTPLVR
AAAAAETSTPSESTIPAGSSPAVFFTPVATLTEESTKPGSASSNSGNSNS
SSLVVNIVPLSTPLPQAQQHEYSSTAATMSTSSNSLATTPQQHYQRHQRH
QQHQQDLSHNGTTTTAPTKTTTAINTSPPKHPPLQEQQQQQSLVSALTSI
LKTHGELGEGLPDSLLTSHCTGLVKVLRETASLQRFILGESQMHGDSQAY
MDVCAHHDAKRTQKQMASLRLLRDDFNEKHAALLKEFRGLREQVTTMRCR
VQNAAWPAEKKTLILAALQRYDTLYEQGGELKTLDLTESAIGAVQKLRRQ
LPRLPEDADVLKDILGRIKRVSRTLMALGLTTEAHMTAAWESVLELLTYR
PMSFVVEETEKAWRELRDVKLQEAQRRQEQKSRLRALVDRLGSPGSSEEK
EEQDEEREEEGEEEEGIDEEEGVKMALKMPKKRREEGRGILSGMVGAVRE
WGEGEEAREEKKGVGGMTKRDKDEEQEEGGKEEDSEEEGGEDRRQSGDST
LSFTCCLDEDDEEKGEGSECHLFREQGDALYAGRLSNGSNSKKGSSSSSR
RSSSSSMGSIYSRRSSSSSIVSIEKEKEVEGGLEGENGNRRPFPITSPVA
PLHQQLQSRARSSSTSSSSSPVPLTEVSARSTSSRSRDASTSSAGSSTSY
STSCSTAKTRGSTRNEGEEGEDENRRRRLYGAKTQLHPSTSSSATAKTKA
ISKSTKGKGSSSTTSTSRRGVPTASSSFSSSSLFSSSTLPTERASMYVSR
TSAAATSCTWGSSVGAGGEGKGGGGGLGSVGGTVAMSGMSKRTTRTDSAA
APGGGNESGGKNKAKTDTQRGAKGRVEAAQALTTSSSSSSSNNKASPPGV
GNEVRVQGQGEGAGAKRSQSFYHPRTYPDSKW*
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Synonyms
Publications