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Properties
Property Name | Value |
TranscriptId | 616130 |
Track | FilteredModels2 |
ProteinId | 616044 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_111 | supercontig | scaffold_111:34117..35167 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11731 ID=mRNA_11731|Name=jgi.p|Nanoce1779_2|616044|organism=Nannochloropsis oceanica|type=mRNA|length=571bp CTCCCTTCCTACCCCCTTGCCCCCCTCCATGCCGTTCCCGATGGCCTCTT GGACGAAGACGGAGAGCCGCAATACGATGCCCCCACCCGTGCTAGGATTG AAAAATTGATCCAAGAGAACAAAATCGTCCTGTTTATGAAAGGCAATCGT TTGTTTCCGTCGTGCGGGTTTAGCAACACCGCCATCCGGATCTTGAATCA GTTGAATGTAGAATACGAGACAGTGGACGTGTTAGCCGACGAACGTATCC GCGGGGAGATTAAAAGGTACAGCGCCTGGCCCACCATCCCCCAGCTATAT CTTCAGGGAGAATTCGTCGGCGGATCAGACATCATCCTCGAGATGTACCA GACGGGCGAGCTTCAAGAAATGATTGAGATCGCGGCAGCTTCCTGAGGGA GGGAGGGAGGGGGAGAGGGAGGGAGGGAGAAGGAGGGAGAGGGAGAGGGA GAGAGGGAGGATATAGTTGAGATCGCGGCAGCTTCGTGAGTGAGGGAGGG AGGGAGAGAGGAAGGGAGGGAGGGTGGGAGAGAAAGAGGAAGAGAGAGAG AATATAGTTGAGATCGCGGCA back to topprotein sequence of jgi.p|Nanoce1779_2|616044 >mRNA_11731-protein ID=mRNA_11731-protein|Name=jgi.p|Nanoce1779_2|616044|organism=Nannochloropsis oceanica|type=polypeptide|length=87bp MKGNRLFPSCGFSNTAIRILNQLNVEYETVDVLADERIRGEIKRYSAWPT IPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS* back to topmRNA from alignment at scaffold_111:34117..35167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11731 ID=mRNA_11731|Name=jgi.p|Nanoce1779_2|616044|organism=Nannochloropsis oceanica|type=mRNA|length=1051bp|location=Sequence derived from alignment at scaffold_111:34117..35167- (Nannochloropsis oceanica) CTCCCTTCCTACCCCCTTGCCCCCCTCCATGCCGTTCCCGATGGCCTCTT
GGACGAAGACGGAGAGCCGCAATACGATGCCCCCACCCGTGCTAGGATTG
AAAAATTGATCCAAGAGAACAAAATCGTCCTGTTTATGAAAGGCAATCGT
TTGTTTCCGTCGTGCGGGTTTAGCAACACCGCCATCCGGATCTTGAATCA
GTTGAATGTAAGTGGAAAGAAGAGAGACGACCGGAGAGACGGTGGATTCA
TTGTAAAGTGTGCAGTTTGAGTCCCTCGGTGCGGCCTGCTCACCCGTCTG
TCTCTCCGTACTTATACTCCCAATGCCCTTGCGTGCATCGCCCCTCACTT
TCCCTCCCTCACTCCCTCCCTCCCTCAGGTAGAATACGAGACAGTGGACG
TGTTAGCCGACGAACGTATCCGCGGGGAGATTAAAAGGTACCTCTCTTCC
TCCCTCCATTTTTTCCCTCCCTCCTTTCCTCTGACTCCACTGTCAAGTCA
GACGGTTTCTAGAAGCGTGCACTCATCCTCACCGCCCCCCCCCCCTCACT
CCAGGTACAGCGCCTGGCCCACCATCCCCCAGCTATATCTTCAGGGAGAA
TTCGTCGGTACGTCTGACTGTGTGCTCCCTCCCTCCCTCCCTCCCCTCCT
TCCCCTCCTCTTTCCCTTCCCTCCCTCCCCCCTCCTTGAACTCCTCCCTC
CTCCTCCAGGCGGGTCAAACATTATTCTCAGAGCCCACCATCCTCTTTCT
CCCTCCTTTCCTCCTTTACTCCTTTCCTCCCTCCCTCCCCCTTCCCCAGG
CGGATCAGACATCATCCTCGAGATGTACCAGACGGGCGAGCTTCAAGAAA
TGATTGAGATCGCGGCAGCTTCCTGAGGGAGGGAGGGAGGGGGAGAGGGA
GGGAGGGAGAAGGAGGGAGAGGGAGAGGGAGAGAGGGAGGATATAGTTGA
GATCGCGGCAGCTTCGTGAGTGAGGGAGGGAGGGAGAGAGGAAGGGAGGG
AGGGTGGGAGAGAAAGAGGAAGAGAGAGAGAATATAGTTGAGATCGCGGC
A back to topCoding sequence (CDS) from alignment at scaffold_111:34117..35167- >mRNA_11731 ID=mRNA_11731|Name=jgi.p|Nanoce1779_2|616044|organism=Nannochloropsis oceanica|type=CDS|length=1044bp|location=Sequence derived from alignment at scaffold_111:34117..35167- (Nannochloropsis oceanica) GCGGATCAGACATCATCCTCGAGATGTACCAGACGGGCGAGCTTCAAGAA ATGATTGAGATCGCGGCAGCTTCCTGAGTACAGCGCCTGGCCCACCATCC CCCAGCTATATCTTCAGGGAGAATTCGTCGGTAGAATACGAGACAGTGGA CGTGTTAGCCGACGAACGTATCCGCGGGGAGATTAAAAGATGAAAGGCAA TCGTTTGTTTCCGTCGTGCGGGTTTAGCAACACCGCCATCCGGATCTTGA ATCAGTTGAATGCGGATCAGACATCATCCTCGAGATGTACCAGACGGGCG AGCTTCAAGAAATGATTGAGATCGCGGCAGCTTCCTGAGTACAGCGCCTG GCCCACCATCCCCCAGCTATATCTTCAGGGAGAATTCGTCGGTAGAATAC GAGACAGTGGACGTGTTAGCCGACGAACGTATCCGCGGGGAGATTAAAAG ATGAAAGGCAATCGTTTGTTTCCGTCGTGCGGGTTTAGCAACACCGCCAT CCGGATCTTGAATCAGTTGAATGCGGATCAGACATCATCCTCGAGATGTA CCAGACGGGCGAGCTTCAAGAAATGATTGAGATCGCGGCAGCTTCCTGAG TACAGCGCCTGGCCCACCATCCCCCAGCTATATCTTCAGGGAGAATTCGT CGGTAGAATACGAGACAGTGGACGTGTTAGCCGACGAACGTATCCGCGGG GAGATTAAAAGATGAAAGGCAATCGTTTGTTTCCGTCGTGCGGGTTTAGC AACACCGCCATCCGGATCTTGAATCAGTTGAATGCGGATCAGACATCATC CTCGAGATGTACCAGACGGGCGAGCTTCAAGAAATGATTGAGATCGCGGC AGCTTCCTGAGTACAGCGCCTGGCCCACCATCCCCCAGCTATATCTTCAG GGAGAATTCGTCGGTAGAATACGAGACAGTGGACGTGTTAGCCGACGAAC GTATCCGCGGGGAGATTAAAAGATGAAAGGCAATCGTTTGTTTCCGTCGT GCGGGTTTAGCAACACCGCCATCCGGATCTTGAATCAGTTGAAT back to top
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