jgi.p|Nanoce1779_2|26589, gene_4538 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|26589
Unique Namegene_4538
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:869557..875919 -

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Properties
Property NameValue
TranscriptId26675
ProteinId26589
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:869557..875919 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00180NO09G00180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|26589mRNA_4538-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|26589mRNA_4538Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|26589

>mRNA_4538-protein ID=mRNA_4538-protein|Name=jgi.p|Nanoce1779_2|26589|organism=Nannochloropsis oceanica|type=polypeptide|length=1841bp
MQGLLPPPFAPGDEDHSKAAPSFDWEEARVTEVFFIMGHAFLRDDVPVVA
KKLAAEMLWSVATSSFPSLSSSSLFWPLESRECRSHLELPFWFERLASED
EEEKPSSSCSSSSSSSSNIENSGRNMIAFRAVIPALLLLDEHIREGEEKE
RQKSSSSSSGACKAFIATVATATAATTAAATTTTVDRITYKEEGILEDAV
LALERLKTTFLSPLIVPHAPPTSTSVSTPLPLVQRLQSRLLTVFQHRQRQ
GLARLKDTLRAYREEEIWTWRRCYSFLLGEEEVVGGEGGPWGAEICRNAF
IRWMKEKRRVRGGRFVADGGGKGKEQEDEEEGGEVVSWMVDDAEDHLRHR
WKLVRRPWATVWVPPSPAAAAAVAAAMTASGGAEVEREDLEEEEEEDVAA
LLRHAQAPLRGGGRKGRGSTVCSDAEAGVGTVTAAATVDEEEMKLKLPIL
PLLVKSQEEESEMEQQQQQQQQEREWEKTKERREDVVDLSQTVLWKELAK
YQKREEEGEEEEEEEDDEEDEEEEEEEEEEGEQQEGEEEKEQQQQRQCSD
AGSSITSTSEVCIGKPQIAEEEGKAKKLEKVKEEEQAREEDVGVVVPSAP
TTAPTGCSKVGQPSSANSIAPGGDRITAAIEGGRGGGGGRGGRGWERAQR
TRVTLLAGPWQSRGWGARSSIPFDHILASPSPHLSSTLPPPSSHVLPDAA
RRLRTTTRSGFLGGEDKIRAGRGGGGKGAGGWLPEGKIDEAVFGAIKESQ
PCEVIRPCGASPGIFQVTTRCLRFLLYPTPPSSLPPPHAVDGGRTSTRWS
LLPYPSTLFLLSDLHALYLRRHQQQDSLALEFFFLDRSTLFLTFSSKPIT
LGIYKAIRKLHSPSLEPHLGHTPRQLLARFKTSQNHSLTQAWVNREISNF
EYLSKLNLLAGRTVNDLSQYPVFPWVLADYTSDTLELDERRSFRDLRWPM
GAQREEAREALRRTYAMLEEVYLNEAREGGREGEAVDSIPPFQHGSHYST
AAFVAWYLVRVEPFTSFHLHLQGGKFDLPDRQFRSLHAAYQGCVTNPSDV
KELIPEFFYLPDFLRNVNKVYLGRTQRGEEVGDVELPPWAGGTAEEFVRL
HREALESECVSEMLHHWIDLIFGCKQRPPYLPLSSSSSSASSALVNAVRR
GSNAVSGAKEGGGGGGGGGGGGGGATAAAPAVAACNVFFNLTYHDAIDLP
ALKADDPVLYEATLRQIQDFGQTPCQLFLTPHPPRALLHQASELIWPIAS
VVPGAGTSLPPSSSSSSSSTSADTDMEKAGLEIPSSLDSSALASPPSASA
SSSPSSSSSLAPLTGRNVVSGPSLPKPERFLSFPPSLLSSSPTSPLLLCV
ERGGCDRLVSVDGRSHVRWHGWCVLSPDVVPPFKLKPDPRGGGREAGRER
GKEEVALDAETGLLFTCGYVDCSFKVAAVEDPYSSSTSDESSSSSSSSSS
SSSSSGGGELIQSVGGHADIVRCLALGKDVRFSHHITYTTCTTTAAATAL
AARGEGGREGRKEGGRGRAFLVSGSEDCTVRVWRVRGKGGREGGREAAGS
VENVTAALRGGGEGGRGGGGGEPVCPEPLHILRGHAEGVTAVAVSVALDV
VLSGARDGTVLVHSLRDGRYIRTLRRGGGREGGQGKGDSGAELPPLLMLG
SVPVEEVEVEEEGKQALEGQHEKPKRRARLPCSSSPHSPRAIHWVGISPA
GYLLSYSRSSGLLTSHSLNGRLLARVSSSPASLYAFTFSEDGNVVLLGGD
NKKVLLLWCHSLRLASDGARRGLEGLAVTDGGCADLSVTPFPATVRCLAL
TAHERHLLVGLENGQAYVLAPEAEYLRTRLKVKLETMGFY*
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Synonyms
Publications