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Properties
Property Name | Value |
TranscriptId | 570570 |
Track | FilteredModels2 |
ProteinId | 570484 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_111 | supercontig | scaffold_111:22600..23937 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11727 ID=mRNA_11727|Name=jgi.p|Nanoce1779_2|570484|organism=Nannochloropsis oceanica|type=mRNA|length=795bp ATGCGATTCATTGCCTCCTCCCGGTCCCTGCTGCTGGCCGCCACCGCTGC TGCGCTCTGCCTCCCGTCGGCGCTCGCCCACATCACGGTGGAGGATAACT TTCTCGACGAGGCTGCGCGCGAGGACATTCTGGCCCAGCTGCCGGGACAA ACCCGTTTCAAGCACACGCTGGACGTGCCGGGCCAGCTGTACCAACGCCT CATGTCCATCATCAACCCAAGCAACACCGATCTCTCTCATACGGAGACCT CGGTGCCGGCCAAGGGGGAAGGCCGATTTGTGCCCGCACACAAGGACGTA TTCGAAGATAATGCGTTGGCGGACGGGCAAGTGGGGTTGGTGTACCTGGA GGGGGATGGCCGCATGCTGTTCCAGCACGAGGTGACGGGCGAGGAGACGG TGGTAGATGTGCAGCCTGGGCGATTGATGTCGTGGGACAACAGTGTGTAC ACGCATACTCTCATTCCCGGGGATCTGCCTCGTCGTATTCTGGGGCCGAT GGCGTTTCGTGATGGAGAGATGCAGTCTATTGGGGATCAAGCCCCTCGCG TCGTTGCTCAAGCGAGAACCAACTCCTTGACTGTGCGTCCGGGAGGAATA ATCAGGGTGGGCCTTTCCTTCGTGGTCCTTGATGTGGATGGAAATGCCGC GAGCGCTAGCGTAAAGCGCGCGATCACCTGGGCTTTCCGTGTGGGGAAGG GCGTGCCGTCCGGTACGGTTGTCCCGATCGGTGTCGTTATTGAGGATGAT AACACCCCAGAGTTCCTGGTCGAGCTGCGGGTGCTGGTGAAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|570484 >mRNA_11727-protein ID=mRNA_11727-protein|Name=jgi.p|Nanoce1779_2|570484|organism=Nannochloropsis oceanica|type=polypeptide|length=265bp MRFIASSRSLLLAATAAALCLPSALAHITVEDNFLDEAAREDILAQLPGQ TRFKHTLDVPGQLYQRLMSIINPSNTDLSHTETSVPAKGEGRFVPAHKDV FEDNALADGQVGLVYLEGDGRMLFQHEVTGEETVVDVQPGRLMSWDNSVY THTLIPGDLPRRILGPMAFRDGEMQSIGDQAPRVVAQARTNSLTVRPGGI IRVGLSFVVLDVDGNAASASVKRAITWAFRVGKGVPSGTVVPIGVVIEDD NTPEFLVELRVLVK* back to topmRNA from alignment at scaffold_111:22600..23937- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11727 ID=mRNA_11727|Name=jgi.p|Nanoce1779_2|570484|organism=Nannochloropsis oceanica|type=mRNA|length=1338bp|location=Sequence derived from alignment at scaffold_111:22600..23937- (Nannochloropsis oceanica) ATGCGATTCATTGCCTCCTCCCGGTCCCTGCTGCTGGCCGCCACCGCTGC
TGCGCTCTGCCTCCCGTCGGCGCTCGCCCACATCACGGTGGAGGATAACT
TTCTCGACGAGGCTGCGCGCGAGGACATTCTGGCCCAGCTGCCGGGACAA
ACCCGTTTCAAGCACACGCTGGACGTGCCGGGCCAGCTGTACCAACGCCT
CATGTCCATCATCAACCCAAGCAACACCGATCTCTCTCATACGGAGACCT
CGGTGCCGGCCAAGGGGGAAGGCCGATTTGTGCCCGCACACAAGGACGTA
TTCGAAGATAATGCGTTGGCGGACGGGCAAGTGGGGTTGGTGTACCTGGA
GGGGGATGGCCGCATGCTGTTCCAGCACGAGGTGACGGGCGAGGAGACGG
TGGTAGATGTGCAGCCTGGGCGATTGATGTCGTGGGACAACAGTGTGTAC
ACGCATACTCTCATTCCCGGGGATCTGCCTCGTCGTATTCTGGGGCCGAT
GGCGTTTCGTGATGGAGAGATGCAGTCTATTGGGGATCAAGCCCCTCGCG
TCGTTGCTCAAGCGAGAACCAACTCCTTGACTGTGCGTCCGGGAGGAATA
ATCAGGGTGGGCCTTTCCTTCGTGGTCCTTGATGTGGATGGAAATGCCGC
GAGCGCTAGCGTAAAGCGCGCGGTGCGGAAGTTGGAGAACAAGGACCTGG
TGATCGGGGTAAGGACGGAGAGGAGAGAGGAGAGGGGGGAGAACGGCGGA
ACGGAAAGATATATATATACTGTGTTTCTTGCTCTGCGTATCGTGTATCT
TGCTATTGACCTGTCTCTTTGTCCCTCTCTCCTCTCTCGTTTCTCCCACC
CTCCACATCTCTCCCCAGTGCGGACTGATGGATCAGAACAGGCGAATGCT
CGGGGGGCGCAACAAGACAACGAATGCGAACGATGATATCACATTCGTAA
ACTCCAAGCTGAAGCCCAATTTCTACAAGCCGAAGTACGTATCTTTGCCC
CGCTTCCTCCCTGTCTGACGGATGTGGGAGCGAGATATGGCGAGCGTGTC
TTTTGGGAGAAGAAAGCCAACTTTTCAGTGCCAGAGCTCATCGTCCCTCT
CTTCGTATTCTCCCTCGCTCTCTTGCTCCCTGCCAGGTTGACCTTCAATA
ATACACTCGATGCTGTGTATTGGACCCTCCCGAGCGAGACGACGAAAATC
CTGCACCCGTACAAGATCACCTGGGCTTTCCGTGTGGGGAAGGGCGTGCC
GTCCGGTACGGTTGTCCCGATCGGTGTCGTTATTGAGGATGATAACACCC
CAGAGTTCCTGGTCGAGCTGCGGGTGCTGGTGAAGTAA back to topCoding sequence (CDS) from alignment at scaffold_111:22600..23937- >mRNA_11727 ID=mRNA_11727|Name=jgi.p|Nanoce1779_2|570484|organism=Nannochloropsis oceanica|type=CDS|length=1590bp|location=Sequence derived from alignment at scaffold_111:22600..23937- (Nannochloropsis oceanica) ATCACCTGGGCTTTCCGTGTGGGGAAGGGCGTGCCGTCCGGTACGGTTGT CCCGATCGGTGTCGTTATTGAGGATGATAACACCCCAGAGTTCCTGGTCG AGCTGCGGGTGCTGGTGAAGTAAATGCGATTCATTGCCTCCTCCCGGTCC CTGCTGCTGGCCGCCACCGCTGCTGCGCTCTGCCTCCCGTCGGCGCTCGC CCACATCACGGTGGAGGATAACTTTCTCGACGAGGCTGCGCGCGAGGACA TTCTGGCCCAGCTGCCGGGACAAACCCGTTTCAAGCACACGCTGGACGTG CCGGGCCAGCTGTACCAACGCCTCATGTCCATCATCAACCCAAGCAACAC CGATCTCTCTCATACGGAGACCTCGGTGCCGGCCAAGGGGGAAGGCCGAT TTGTGCCCGCACACAAGGACGTATTCGAAGATAATGCGTTGGCGGACGGG CAAGTGGGGTTGGTGTACCTGGAGGGGGATGGCCGCATGCTGTTCCAGCA CGAGGTGACGGGCGAGGAGACGGTGGTAGATGTGCAGCCTGGGCGATTGA TGTCGTGGGACAACAGTGTGTACACGCATACTCTCATTCCCGGGGATCTG CCTCGTCGTATTCTGGGGCCGATGGCGTTTCGTGATGGAGAGATGCAGTC TATTGGGGATCAAGCCCCTCGCGTCGTTGCTCAAGCGAGAACCAACTCCT TGACTGTGCGTCCGGGAGGAATAATCAGGGTGGGCCTTTCCTTCGTGGTC CTTGATGTGGATGGAAATGCCGCGAGCGCTAGCGTAAAGCGCGCGATCAC CTGGGCTTTCCGTGTGGGGAAGGGCGTGCCGTCCGGTACGGTTGTCCCGA TCGGTGTCGTTATTGAGGATGATAACACCCCAGAGTTCCTGGTCGAGCTG CGGGTGCTGGTGAAGTAAATGCGATTCATTGCCTCCTCCCGGTCCCTGCT GCTGGCCGCCACCGCTGCTGCGCTCTGCCTCCCGTCGGCGCTCGCCCACA TCACGGTGGAGGATAACTTTCTCGACGAGGCTGCGCGCGAGGACATTCTG GCCCAGCTGCCGGGACAAACCCGTTTCAAGCACACGCTGGACGTGCCGGG CCAGCTGTACCAACGCCTCATGTCCATCATCAACCCAAGCAACACCGATC TCTCTCATACGGAGACCTCGGTGCCGGCCAAGGGGGAAGGCCGATTTGTG CCCGCACACAAGGACGTATTCGAAGATAATGCGTTGGCGGACGGGCAAGT GGGGTTGGTGTACCTGGAGGGGGATGGCCGCATGCTGTTCCAGCACGAGG TGACGGGCGAGGAGACGGTGGTAGATGTGCAGCCTGGGCGATTGATGTCG TGGGACAACAGTGTGTACACGCATACTCTCATTCCCGGGGATCTGCCTCG TCGTATTCTGGGGCCGATGGCGTTTCGTGATGGAGAGATGCAGTCTATTG GGGATCAAGCCCCTCGCGTCGTTGCTCAAGCGAGAACCAACTCCTTGACT GTGCGTCCGGGAGGAATAATCAGGGTGGGCCTTTCCTTCGTGGTCCTTGA TGTGGATGGAAATGCCGCGAGCGCTAGCGTAAAGCGCGCG back to top
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