jgi.p|Nanoce1779_2|652264, gene_7354 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|652264
Unique Name	gene_7354
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Alignment location	scaffold_19:309887..315968 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	652350
ProteinId	652264
Product name	CobN/magnesium chelatase
Portal id	Nanoce1779_2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_19	supercontig	scaffold_19:309887..315968 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE164714	2022-03-15
GO annotation for N. oceanica CCMP1779 v2	2020-03-30
PRJNA285666	2019-07-03
PRJNA157867	2019-07-02
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016851	magnesium chelatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniL030	ncniL030	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G01300	NO24G01300	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|652264	mRNA_7354-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|652264	mRNA_7354	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of jgi.p|Nanoce1779_2|652264

>mRNA_7354-protein ID=mRNA_7354-protein|Name=jgi.p|Nanoce1779_2|652264|organism=Nannochloropsis oceanica|type=polypeptide|length=1366bp
MAGFEAFNIQLYRQAARTLSSLHPSLTLTVFTDRDISTQPEVVSAALAEA
DVFFGSLIFDYDQVNWLRTRIENIKTRLVFESALELMSFTRVGSFTMGGE
GGKEGGPGAQKGGPPPVVKALLSKFGSKKEEDRLKGYLSFLKIGPTILKL
VPGKKAMDVRTWLEVYSYWNQGGVSNVVSLFLLLAQRFSLLGEEAVAPLE
VVETPGQGLIHPLTSEIFQSPRLYLQWYLRRAALGQKEDGMVPPSLLETA
PRVAVLLYRKHVITNQFYINQLIRIFEKEGLVPIPVFINGVEGHTIVRDL
LTTQYEQAQRRQGICVIDSLSSEAVEVDAVVNTIGFPLVGGPAGSMEGGR
RIDVATRLLAAKNIPLLVAAPLLLQEIRSWREKGVLGLQSAVLYSLPELD
GAVDTVVLGGLVGDKIALVPERVRKLARRIKGWHAVRVTPKKEKRIGILC
YGFPPNVGAIGTAALLNVPKSLEKLLVALQEEGYDTGLDARKIDGESVIA
ILTAINQEAVVAGGPKGVTPGVLRQAVGERTTRRIEKMWGELEGYIGLFT
SQAGELVVGGVQLGNVWIGIQPLLGIEGDPMRLLFERDLTPHPQYVAFYE
WMKREFKAQAVVHFGMHGTVEWLPGSPLGNTATTWPDILLGEIPNLYLYA
CNNPSESILAKRRGYGTIVSHNVPPYSRAGLYKDLAELRELLSEYRENSQ
GNAGLRPVIAGVLERTGLWGDCPWPSSFPSSSSSSLPSSSEKQAGRQQVE
REGSLTVEEAEVVDPDLFDAYTGILSSYLGVLEQRLFSEGLHVLGQRPTP
SQLLQYLDAYFEGDPSLPPSLLRAVEGAKEGGVKDKVVEALEIKRLLEQN
TDELSSLLKGLSGQYILPGVGGDLLRDGRGVLPTGRNIHALDPYRLPSPG
AWARGQEAVRKILEQHKEGRGEGGAEWPETVAVMLWGLDVIKTRGESVAI
LLALVGARPVKEATGRVVRYELVPLKELGRPRIDVLASLSGIFRDSFSNV
VDLLDDLFERAAEAEGESEEENYIKKHARKLQAQGEERPTARLFSNPAGD
FGSLVNERVGSGEWEQEEELGETWAGRNSFSFGKGERERGVRREGVLREL
LATTGRIVQEIDSVEYGMTDIQEYYANTGALKKAAENVANSPERIAEEEA
EEKENTRREDAQSFSSSTTTTQAQPHPPFPSTTSTLGGKRPKRVVPVSII
EAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTA
LVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLE
ANGRGYWEAGPEVLELLKELYAEAEDEIELSGGKGVRKKVLREQESEKEG
GVVKRLAAEKTPVSM*

Synonyms

Publications