jgi.p|Nanoce1779_2|568339, gene_8263 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|568339
Unique Namegene_8263
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:222480..223178 +

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Properties
Property NameValue
TranscriptId568425
ProteinId568339
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:222480..223178 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568339mRNA_8263-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568339mRNA_8263Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|568339

>mRNA_8263-protein ID=mRNA_8263-protein|Name=jgi.p|Nanoce1779_2|568339|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MTGRMEGERGDGADVGEEIEIEKQKNGGIGGVVDMKGTKEEVRERRNSGD
SEEGARGGGRLRSRGRTLVLCRPITGRTHQIRCHLQWLGFPIVNDPNYGL
NEEVNAFRKRWGGKRGEEGKEEGGGGGGGGGGGGGGGGEGGGEKARVKIF
ESLPAMEDKEGREGKGKGREAETEEERIERLCPYCYHGDEVMFKEEQLHH
KGICLHAWKYEGRSWKFETQPPTWAQGLLPEL*
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Synonyms
Publications