jgi.p|Nanoce1779_2|571372, gene_1220 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|571372
Unique Namegene_1220
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:7311..9191 +

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Properties
Property NameValue
TranscriptId571458
ProteinId571372
Product nameCtr copper transporter family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:7311..9191 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006825copper ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00450NO03G00450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571372mRNA_1220-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571372mRNA_1220Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|571372

>mRNA_1220-protein ID=mRNA_1220-protein|Name=jgi.p|Nanoce1779_2|571372|organism=Nannochloropsis oceanica|type=polypeptide|length=217bp
MDPGMDMGGMDGMDMGEGNGYCLGDGMVMNNGFSFMTKGGSCILYLFQGA
VVNTAGKYAAAIIGTFFLAFSVEALRHFRFWMRLRRARQTTAAVLAAKEG
GEEKVRGVRAQVLPILLEAFLFGSHMFIAYLVMLLVMLYEWAIFISLVLG
LAAGYFTMEMWEAYRVAKGKDEPSAMIAVGGGCGCGEEVIHVAAAVGENG
GAKGGADDPASSNNKV*
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Synonyms
Publications