jgi.p|Nanoce1779_2|42276, gene_11277 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|42276
Unique Namegene_11277
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_110:29889..35203 -

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Properties
Property NameValue
TranscriptId42362
ProteinId42276
Product nameDomain of unknown function DUF21-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:29889..35203 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL080ncniL080Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03600NO11G03600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|42276mRNA_11277-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|42276mRNA_11277Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|42276

>mRNA_11277-protein ID=mRNA_11277-protein|Name=jgi.p|Nanoce1779_2|42276|organism=Nannochloropsis oceanica|type=polypeptide|length=874bp
MTMLTYGIQRKGRGRSSFLPLLLTFGVVLVAGGGQPPTTSWQQQEQQEQQ
QQQQAHCLALLTVTYPIPPSSSSSSLYSPSSPSFSSSSPSPPSTSSFPPL
SFTWPHIEATSGGYATFKDPDDIVNLCVAFACVLCAAIAAGLTIGLMSID
PLELEIKQRVGTVEECRQASVVLPLIQRHHYLLVTLLLYNSAANETLPLF
LDKLVPSYVAVILSVTLVLIFGEILPSALFSGPNQLKIAARMASFVWFLM
LILSPISYPLAWLLDRCFGSHNPRKRYNRAELSALIEIHQEVKRRNITIL
PSGASYQVNGGSSSTSSQQAPQYAHMSASSATSARAGLLSISHHPGAGRG
GGKGGTGSSSSGSSSGRGHAAGTDAMLSQDEVDIVVGVLKIASKTVRDCL
VPMDKVFCLSTRDELDGPMLATIMSSGFSRIPVYEGADPSFIRGFLLVKR
LIVLDPASRRRVGSLSLRQPLVVSPLCPLIDLLNAFQEGRSHLALVSAEP
HLALDCITQGRPLKGGAAPLGIITLEDVIEEILQEEILDEHDRTREELER
RRQRGAKQVLSASLLRKESRELNTSSIIDFEGPYTGSVSSSSASSSSFSP
SFPFAVSAAAGTAGSSSTSSASCIQQQVVVDLALHSMAQSGTAAAGGGGG
GGGGMLYHYNAPSSPTKRRTQQQQQPSIYTSYPSPTSVLPHLQQQEQQLP
QLDRSRPDPSLSRLWHAHHQLEEGREGGERGGGGSVPKHRRAVSADADSS
SGRGGSGSQKGGGGEEGEGGREGWRETGGGGGGFGLFRSRSAEDPTEIQQ
LPWSLAQQGPPQSGGRSSQQQRRQQQQQQQEQQQSQCRPIPEEGVGPVGS
ATKEEGKGEGLTEPLLRPVDSQF*
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Synonyms
Publications