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Properties
| Property Name | Value |
|---|
| TranscriptId | 618407 |
| Track | FilteredModels2 |
| ProteinId | 618321 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:11037..12015 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11468 ID=mRNA_11468|Name=jgi.p|Nanoce1779_2|618321|organism=Nannochloropsis oceanica|type=mRNA|length=674bp
TCGTATTCCGTGCCTGCATGCTCCCTCTCCTTTACCAAGCTTCCTCCTCC
CCTTCCTCACTGGATTCCCCCCGAGCTATCCCTTTCGTGAAACTGATCTT
CTTGTCACCCCTTTTTTTTGGTCTGGCGCACGCCCACCACGCCCTGCAGC
GGGTGCGAGAAGGATTGCCGCCCGCACAGGCCCTTCTCGAAGTAGCGTTG
CAAGTTGCCTACACCAGCATCTTCGGCTGGCATGCAGTTACCTCTTTCTT
CTTCCACTCTCCAGCGTTCCTTTTCCTCCGCACCGGCTCTCTCCTGCCCT
GCATCCTAACCCACTCCTTCTGCAACTTTGTGGGCCTCCCAAACCTGGCC
TTTATGCTTTCACCCTCCTCTCTTACGCCCTCTCCTGCCTCCGCCTTCCT
CCTGTATGTGCATCGATGGAAGTTTCTCGCTGCTCACCTTCTAGGGATCG
CCCTTTTTGTTGCACTTTTGTTCCCATTCTCGGAGCCGAAGCTGTTCACC
GAGAGAAGATTAGAAGGGGAAAGAGGGAGCTCTGGAGGAATTAATCAAAA
TAAAGAAATGAAATGAAAATGTCTCTATAAGTAGGCTTCGGCATATTTAG
CGCTAAAGATCCCATTTGGCAAATGATGCTCGCTATTTTGCTTTTGATGA
CAGTGAATTGTGGGCGTTAATCAT back to topprotein sequence of jgi.p|Nanoce1779_2|618321 >mRNA_11468-protein ID=mRNA_11468-protein|Name=jgi.p|Nanoce1779_2|618321|organism=Nannochloropsis oceanica|type=polypeptide|length=183bp
MLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGL
PPAQALLEVALQVAYTSIFGWHAVTSFFFHSPAFLFLRTGSLLPCILTHS
FCNFVGLPNLAFMLSPSSLTPSPASAFLLYVHRWKFLAAHLLGIALFVAL
LFPFSEPKLFTERRLEGERGSSGGINQNKEMK* back to topmRNA from alignment at scaffold_154:11037..12015+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11468 ID=mRNA_11468|Name=jgi.p|Nanoce1779_2|618321|organism=Nannochloropsis oceanica|type=mRNA|length=979bp|location=Sequence derived from alignment at scaffold_154:11037..12015+ (Nannochloropsis oceanica)
TCGTATTCCGTGCCTGCATGCTCCCTCTCCTTTACCAAGCTTCCTCCTCC
CCTTCCTCACTGGATTCCCCCCGAGCTATCCCTTTCGTGAAACTGATCTT
CTTGTCACCCCTTTTTTTTGGTCTGGCGCACGCCCACCACGCCCTGCAGC
GGGTGCGAGAAGGATTGCCGGTAGGGGACGAGGGAAGGCGGGATGAAGGA
GGCAAATCCTAAAAGAGAGAGCACCTATGAAGAGCTGAGGCAAAAGAGCG
TGAGGTTCATGAAATTCTGTTTTTCTCCCCTTCGCTCTCCTCGTTTGCCT
CACAGCCCGCACAGGCCCTTCTCGAAGTAGCGTTGCAAGTTGCCTACACC
AGCATCTTCGGCTGGCATGCAGGTAAGGGTATGTTGGGGGCCGGAGGGAT
AGAGAGAAAGTTAGGAAAGAGGACGCCTTCAACTTTTCCCCATTCTCGAT
TATATATTCAGTTACCTCTTTCTTCTTCCACTCTCCAGCGTTCCTTTTCC
TCCGCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCCTTCTGCAAC
TTTGTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTCCTCTCTTAC
GCCCTCTCCTGCCTCCGCCTTCCTCCTGTATGTGCATCGATGGAAGTTTC
TCGCTGCTCACCTTCTAGGGATCGCCCTTTTTGTTGCACTTTTGTTCCCA
TTCTCGGAGCCGAAGCTGTTCACCGAGAGAAGATTAGAAGGGGAAAGAGG
TGTGCCATTATACTGGCAATGAGAACGGCAAAAAAGGCATGCGAGGGCGA
GGGGTTTGTGGATAAATTCGTCCTTGAAAGGGAGCTCTGGAGGAATTAAT
CAAAATAAAGAAATGAAATGAAAATGTCTCTATAAGTAGGCTTCGGCATA
TTTAGCGCTAAAGATCCCATTTGGCAAATGATGCTCGCTATTTTGCTTTT
GATGACAGTGAATTGTGGGCGTTAATCAT back to topCoding sequence (CDS) from alignment at scaffold_154:11037..12015+ >mRNA_11468 ID=mRNA_11468|Name=jgi.p|Nanoce1779_2|618321|organism=Nannochloropsis oceanica|type=CDS|length=2196bp|location=Sequence derived from alignment at scaffold_154:11037..12015+ (Nannochloropsis oceanica)
ATGCTCCCTCTCCTTTACCAAGCTTCCTCCTCCCCTTCCTCACTGGATTC
CCCCCGAGCTATCCCTTTCGTGAAACTGATCTTCTTGTCACCCCTTTTTT
TTGGTCTGGCGCACGCCCACCACGCCCTGCAGCGGGTGCGAGAAGGATTG
CCGCCCGCACAGGCCCTTCTCGAAGTAGCGTTGCAAGTTGCCTACACCAG
CATCTTCGGCTGGCATGCAGTTACCTCTTTCTTCTTCCACTCTCCAGCGT
TCCTTTTCCTCCGCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCC
TTCTGCAACTTTGTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTC
CTCTCTTACGCCCTCTCCTGCCTCCGCCTTCCTCCTGTATGTGCATCGAT
GGAAGTTTCTCGCTGCTCACCTTCTAGGGATCGCCCTTTTTGTTGCACTT
TTGTTCCCATTCTCGGAGCCGAAGCTGTTCACCGAGAGAAGATTAGAAGG
GGAAAGAGGGAGCTCTGGAGGAATTAATCAAAATAAAGAAATGAAATGAA
TGCTCCCTCTCCTTTACCAAGCTTCCTCCTCCCCTTCCTCACTGGATTCC
CCCCGAGCTATCCCTTTCGTGAAACTGATCTTCTTGTCACCCCTTTTTTT
TGGTCTGGCGCACGCCCACCACGCCCTGCAGCGGGTGCGAGAAGGATTGC
CGCCCGCACAGGCCCTTCTCGAAGTAGCGTTGCAAGTTGCCTACACCAGC
ATCTTCGGCTGGCATGCAGTTACCTCTTTCTTCTTCCACTCTCCAGCGTT
CCTTTTCCTCCGCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCCT
TCTGCAACTTTGTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTCC
TCTCTTACGCCCTCTCCTGCCTCCGCCTTCCTCCTGTATGTGCATCGATG
GAAGTTTCTCGCTGCTCACCTTCTAGGGATCGCCCTTTTTGTTGCACTTT
TGTTCCCATTCTCGGAGCCGAAGCTGTTCACCGAGAGAAGATTAGAAGGG
GAAAGAGGGAGCTCTGGAGGAATTAATCAAAATAAAGAAATGAAATGAAT
GCTCCCTCTCCTTTACCAAGCTTCCTCCTCCCCTTCCTCACTGGATTCCC
CCCGAGCTATCCCTTTCGTGAAACTGATCTTCTTGTCACCCCTTTTTTTT
GGTCTGGCGCACGCCCACCACGCCCTGCAGCGGGTGCGAGAAGGATTGCC
GCCCGCACAGGCCCTTCTCGAAGTAGCGTTGCAAGTTGCCTACACCAGCA
TCTTCGGCTGGCATGCAGTTACCTCTTTCTTCTTCCACTCTCCAGCGTTC
CTTTTCCTCCGCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCCTT
CTGCAACTTTGTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTCCT
CTCTTACGCCCTCTCCTGCCTCCGCCTTCCTCCTGTATGTGCATCGATGG
AAGTTTCTCGCTGCTCACCTTCTAGGGATCGCCCTTTTTGTTGCACTTTT
GTTCCCATTCTCGGAGCCGAAGCTGTTCACCGAGAGAAGATTAGAAGGGG
AAAGAGGGAGCTCTGGAGGAATTAATCAAAATAAAGAAATGAAATGAATG
CTCCCTCTCCTTTACCAAGCTTCCTCCTCCCCTTCCTCACTGGATTCCCC
CCGAGCTATCCCTTTCGTGAAACTGATCTTCTTGTCACCCCTTTTTTTTG
GTCTGGCGCACGCCCACCACGCCCTGCAGCGGGTGCGAGAAGGATTGCCG
CCCGCACAGGCCCTTCTCGAAGTAGCGTTGCAAGTTGCCTACACCAGCAT
CTTCGGCTGGCATGCAGTTACCTCTTTCTTCTTCCACTCTCCAGCGTTCC
TTTTCCTCCGCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCCTTC
TGCAACTTTGTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTCCTC
TCTTACGCCCTCTCCTGCCTCCGCCTTCCTCCTGTATGTGCATCGATGGA
AGTTTCTCGCTGCTCACCTTCTAGGGATCGCCCTTTTTGTTGCACTTTTG
TTCCCATTCTCGGAGCCGAAGCTGTTCACCGAGAGAAGATTAGAAGGGGA
AAGAGGGAGCTCTGGAGGAATTAATCAAAATAAAGAAATGAAATGA back to top
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