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Properties
Property Name | Value |
TranscriptId | 597600 |
Track | FilteredModels2 |
ProteinId | 597514 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:301445..304542 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6623 ID=mRNA_6623|Name=jgi.p|Nanoce1779_2|597514|organism=Nannochloropsis oceanica|type=mRNA|length=3098bp AATAGTACAGCATTCCAAGCAAAATAATCATGGTGCCACGCCACAGGTCC AAGCCCCCACGCCTTCCTCCGCTCTTCCTCCTCCTCCTCGTCTTCAAAAT TTTCCTTGCCACCGTCACTGCCTCTGCGACGCACCAACTCAGTGGCATCT TTCAGAACGTGGACTTTACCAAGGGCTCCCTCGATGTGCTGGAGCGCGCT ATTTCCACTGCCAAGTCCAAGGCCAACGCGCAAGTCTCCCCTCTTCACCT GGCAGTGTGTCTCTTTGATGAGGATGCTGAGCACAAGGGGGGACTGGGAG GGCAATTGGTCGCAAAGGCAAACGTGCCCTTGGCCCAGCTACGTCGAAGT CTTGCCTCGGCAATCGCTAAGGATCATCCGACTCAGTCCCCTGCCCCCAG CCAGCTCTCCATTTCCAAGGACCTACAGACATTGGTCCAAACAGCGGAAA GGATGAGGAGCGACGCCGGGGATTCCTACGTCGGTGTCCACCACCTCCTG CAGGCACTCGTGCAAGACGCCAAGGCGGGCAAGATACTGAAAGAACAAGG CCTTGCTCTCAATAAAGTTAAGGGAATAGTGGCCTCGTTGCGCAAGGGTC GCAAGACGGAGAGCCGGCAGGAGGGAGAGAGCAACTTTGAAAATTTGAAC AAGTACGGACGCGACCTGGTAGCGGATGCCGAGAAAGGCAAACTTGATCC TGTCATTGGTCGCGATGGAGAAATTCGACGGGTGGTGGAAGTATTGAGCC GGCGGACCAAGAATAATCCGATTTTGCTGGGAGAGCCGGGCGTAGGCAAG ACCGCCATCGTTGAGGGACTTGCTTTGCGCATCCTCAATGGGGACGTACC CAAGGCACTCGAGGATAACAAGGTCATAAGCCTTGACATGGGTAGCCTGA TTGCCGGAGCGAAGTATCAAGGGGAGTTCGAAGAGCGCCTTAAGGCTGTG TTGGAAGAAGTGGCGCAGGGTGATGGAAAGGTTGTGTTATTCATTGATGA GATCCACACGGTTGTGGGCGCGGGCGCGACTTCGGGCGCGATGGATGCAA GCAATTTACTTAAACCCATGCTGGCGCGGGGGGAGCTACGGTGCATTGGC GCCACAACGTTGGGAGAGTACAAGAAGTACATTGAAAAGGATGCGGCGTT CGAAAGGCGCTTTCAGCCCGTGTTTGTCACCGAGCCCTCTGTTGAGGACA CGATTTCCATTCTGCGAGGGTTGAGGGACCGCTACGAGAGTCATCATGGC GTTCGAATTCTGGATGCTGCTTTGGTGGAAGCCGCGCGGCTCAGCAACCG GTATGTTTCGGGGAGAAAGCTGCCGGATAAGGCCATTGATTTGATGGACG AGGCTTGCGCGAACGTGCGCGTCGACCTAGACTCCCGTCCGCAGGCACTT GATCAAGTGGAGCGGAAGTGTCTTCAACTCGAGATAGAGGCAGCAGCGCT GGCAAAGGAGGAATCAACAGACCCTGCCTCGGCAACGCGATTGGGGGAAG TCCGCCGCGAACTTGAGCAGTTGAAGGAGACTAGGACGGCACTAGAAGGA GAGTATCTGAAAGCCCAGGGACTGTTGGAGGAACTGGCGAACCTGCGCCG GGAAGTAGAGGACGTCGAATGGGCGGTCGATGAAAATAAGCGCAAGTTTC AGGTCGAAAAAGCGGCGGAGCTCCAGTACACGGAGTTGCCCAAGCTTCAG GAGCGGTACGCTGAGAAACTCGATGAGCTAAAGAAAAGCAGCAATTTGCT GCAAGATTTCGTGGGTCCGGAGCAGATTGCCTCGGTTGTGTCGCGGTGGA CCGGCATTCCTGTATCGAAATTGAACCAGGGGGAGCGGGATCGGGTGTTG GGGTTGGAGGACCGCTTGAAATCGCATGTGATTGGCCAAGATGCGGCGAT CAAGGCCGTGGCAAGCGCCATTTTGCGATCGCGCGCAGGCCTCTCGGCAA GCTCGCGCCCGATTGGCTCGTTCCTATTTTTAGGGCCGACAGGTGTGGGC AAGACGCACGTGGCCAAGCAGTTGGCAAAAGAATTGTTTGACGACGAGAA GGCAATGCTTCGTGTTGACATGTCGGAGTACATGGAGCAGCATACTGTGG CGCGATTGATTGGCTCACCTCCTGGGTATATTGGGCATGATGAAGGGGGG CAATTGACGGAAGCGGTGCGTCGTCGGCCATATAGTGTGATTCTATTCGA CGAAGTTGAAAAGGCCCACAAATCTGTGCTTAATGTTTTGTTGCAGATGT TGGACGATGGGCGCTTGACCGATGGCAAGGGTCGCACCGTTGATTTCAGC AACACGGTGATCATCATGACTTCAAATGTGGGGGCCGATGTGATTATGCG TGATGTGCGCGCACACCAAAAATTGTCCAGCAAAGGAATGAAGATGTTGC AGGACCGGTTGCGGTCACACTTTTTGCCTGAGTTCCTGAATAGGCTGGAC GAGACGGTTGTGTTCCAGCCCTTGTCACACTCGACGCTCAAACAAATTTT GGTGCATCAGTTGACTGAGGCAACGATGATGTTGCAGGCTGCCGATACGA ACATTACGGTCTCTTTAGACGAGTCGGCGAATGAGTATTTGCTTCGCAAG GGTTATGATGTCGTGAATGGTGCTCGACCTTTGCGCCGGTTGATCGAGCG GATCGTGGTGACGGAGCTGAGTCGTTTGATTGTCGCGGGGCACTTGTGCT CGAATAGTAAGGTAAATGTGGAGATGGAGCACGTGCTGGGCGAAGGGGAT TGTTTCAAGTACATTATACAAAGGTGGGAGGGAGGCGTAGGGACCAAAAA GGAGGGGGAGCCAGGGGTGTTTTGGCAGATGTTGGGTGACTACATGTTGC CGCAGGACGACGGTGAGGAGGGGCCAGGGGTGGAGGGAGGAAGGTATGAC GACGAGCTGTGATGGCAGGAGTTCGACAGAATGGATGGAAGACTTTCCTC GACAAAATTGACATTAAAACCAATAAATGAACATAGAAGAATGAGACACA CACAAAAAGAAAATAATCACCGTCTGTTGTGCGATCTTTCGGGAAGGGAT ATGGTAAAAGTTGGGGATGACCAGAGTAAAGAGATATAAGAGACACAA back to topprotein sequence of jgi.p|Nanoce1779_2|597514 >mRNA_6623-protein ID=mRNA_6623-protein|Name=jgi.p|Nanoce1779_2|597514|organism=Nannochloropsis oceanica|type=polypeptide|length=961bp MVPRHRSKPPRLPPLFLLLLVFKIFLATVTASATHQLSGIFQNVDFTKGS LDVLERAISTAKSKANAQVSPLHLAVCLFDEDAEHKGGLGGQLVAKANVP LAQLRRSLASAIAKDHPTQSPAPSQLSISKDLQTLVQTAERMRSDAGDSY VGVHHLLQALVQDAKAGKILKEQGLALNKVKGIVASLRKGRKTESRQEGE SNFENLNKYGRDLVADAEKGKLDPVIGRDGEIRRVVEVLSRRTKNNPILL GEPGVGKTAIVEGLALRILNGDVPKALEDNKVISLDMGSLIAGAKYQGEF EERLKAVLEEVAQGDGKVVLFIDEIHTVVGAGATSGAMDASNLLKPMLAR GELRCIGATTLGEYKKYIEKDAAFERRFQPVFVTEPSVEDTISILRGLRD RYESHHGVRILDAALVEAARLSNRYVSGRKLPDKAIDLMDEACANVRVDL DSRPQALDQVERKCLQLEIEAAALAKEESTDPASATRLGEVRRELEQLKE TRTALEGEYLKAQGLLEELANLRREVEDVEWAVDENKRKFQVEKAAELQY TELPKLQERYAEKLDELKKSSNLLQDFVGPEQIASVVSRWTGIPVSKLNQ GERDRVLGLEDRLKSHVIGQDAAIKAVASAILRSRAGLSASSRPIGSFLF LGPTGVGKTHVAKQLAKELFDDEKAMLRVDMSEYMEQHTVARLIGSPPGY IGHDEGGQLTEAVRRRPYSVILFDEVEKAHKSVLNVLLQMLDDGRLTDGK GRTVDFSNTVIIMTSNVGADVIMRDVRAHQKLSSKGMKMLQDRLRSHFLP EFLNRLDETVVFQPLSHSTLKQILVHQLTEATMMLQAADTNITVSLDESA NEYLLRKGYDVVNGARPLRRLIERIVVTELSRLIVAGHLCSNSKVNVEME HVLGEGDCFKYIIQRWEGGVGTKKEGEPGVFWQMLGDYMLPQDDGEEGPG VEGGRYDDEL* back to topmRNA from alignment at scaffold_18:301445..304542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6623 ID=mRNA_6623|Name=jgi.p|Nanoce1779_2|597514|organism=Nannochloropsis oceanica|type=mRNA|length=3098bp|location=Sequence derived from alignment at scaffold_18:301445..304542- (Nannochloropsis oceanica) AATAGTACAGCATTCCAAGCAAAATAATCATGGTGCCACGCCACAGGTCC
AAGCCCCCACGCCTTCCTCCGCTCTTCCTCCTCCTCCTCGTCTTCAAAAT
TTTCCTTGCCACCGTCACTGCCTCTGCGACGCACCAACTCAGTGGCATCT
TTCAGAACGTGGACTTTACCAAGGGCTCCCTCGATGTGCTGGAGCGCGCT
ATTTCCACTGCCAAGTCCAAGGCCAACGCGCAAGTCTCCCCTCTTCACCT
GGCAGTGTGTCTCTTTGATGAGGATGCTGAGCACAAGGGGGGACTGGGAG
GGCAATTGGTCGCAAAGGCAAACGTGCCCTTGGCCCAGCTACGTCGAAGT
CTTGCCTCGGCAATCGCTAAGGATCATCCGACTCAGTCCCCTGCCCCCAG
CCAGCTCTCCATTTCCAAGGACCTACAGACATTGGTCCAAACAGCGGAAA
GGATGAGGAGCGACGCCGGGGATTCCTACGTCGGTGTCCACCACCTCCTG
CAGGCACTCGTGCAAGACGCCAAGGCGGGCAAGATACTGAAAGAACAAGG
CCTTGCTCTCAATAAAGTTAAGGGAATAGTGGCCTCGTTGCGCAAGGGTC
GCAAGACGGAGAGCCGGCAGGAGGGAGAGAGCAACTTTGAAAATTTGAAC
AAGTACGGACGCGACCTGGTAGCGGATGCCGAGAAAGGCAAACTTGATCC
TGTCATTGGTCGCGATGGAGAAATTCGACGGGTGGTGGAAGTATTGAGCC
GGCGGACCAAGAATAATCCGATTTTGCTGGGAGAGCCGGGCGTAGGCAAG
ACCGCCATCGTTGAGGGACTTGCTTTGCGCATCCTCAATGGGGACGTACC
CAAGGCACTCGAGGATAACAAGGTCATAAGCCTTGACATGGGTAGCCTGA
TTGCCGGAGCGAAGTATCAAGGGGAGTTCGAAGAGCGCCTTAAGGCTGTG
TTGGAAGAAGTGGCGCAGGGTGATGGAAAGGTTGTGTTATTCATTGATGA
GATCCACACGGTTGTGGGCGCGGGCGCGACTTCGGGCGCGATGGATGCAA
GCAATTTACTTAAACCCATGCTGGCGCGGGGGGAGCTACGGTGCATTGGC
GCCACAACGTTGGGAGAGTACAAGAAGTACATTGAAAAGGATGCGGCGTT
CGAAAGGCGCTTTCAGCCCGTGTTTGTCACCGAGCCCTCTGTTGAGGACA
CGATTTCCATTCTGCGAGGGTTGAGGGACCGCTACGAGAGTCATCATGGC
GTTCGAATTCTGGATGCTGCTTTGGTGGAAGCCGCGCGGCTCAGCAACCG
GTATGTTTCGGGGAGAAAGCTGCCGGATAAGGCCATTGATTTGATGGACG
AGGCTTGCGCGAACGTGCGCGTCGACCTAGACTCCCGTCCGCAGGCACTT
GATCAAGTGGAGCGGAAGTGTCTTCAACTCGAGATAGAGGCAGCAGCGCT
GGCAAAGGAGGAATCAACAGACCCTGCCTCGGCAACGCGATTGGGGGAAG
TCCGCCGCGAACTTGAGCAGTTGAAGGAGACTAGGACGGCACTAGAAGGA
GAGTATCTGAAAGCCCAGGGACTGTTGGAGGAACTGGCGAACCTGCGCCG
GGAAGTAGAGGACGTCGAATGGGCGGTCGATGAAAATAAGCGCAAGTTTC
AGGTCGAAAAAGCGGCGGAGCTCCAGTACACGGAGTTGCCCAAGCTTCAG
GAGCGGTACGCTGAGAAACTCGATGAGCTAAAGAAAAGCAGCAATTTGCT
GCAAGATTTCGTGGGTCCGGAGCAGATTGCCTCGGTTGTGTCGCGGTGGA
CCGGCATTCCTGTATCGAAATTGAACCAGGGGGAGCGGGATCGGGTGTTG
GGGTTGGAGGACCGCTTGAAATCGCATGTGATTGGCCAAGATGCGGCGAT
CAAGGCCGTGGCAAGCGCCATTTTGCGATCGCGCGCAGGCCTCTCGGCAA
GCTCGCGCCCGATTGGCTCGTTCCTATTTTTAGGGCCGACAGGTGTGGGC
AAGACGCACGTGGCCAAGCAGTTGGCAAAAGAATTGTTTGACGACGAGAA
GGCAATGCTTCGTGTTGACATGTCGGAGTACATGGAGCAGCATACTGTGG
CGCGATTGATTGGCTCACCTCCTGGGTATATTGGGCATGATGAAGGGGGG
CAATTGACGGAAGCGGTGCGTCGTCGGCCATATAGTGTGATTCTATTCGA
CGAAGTTGAAAAGGCCCACAAATCTGTGCTTAATGTTTTGTTGCAGATGT
TGGACGATGGGCGCTTGACCGATGGCAAGGGTCGCACCGTTGATTTCAGC
AACACGGTGATCATCATGACTTCAAATGTGGGGGCCGATGTGATTATGCG
TGATGTGCGCGCACACCAAAAATTGTCCAGCAAAGGAATGAAGATGTTGC
AGGACCGGTTGCGGTCACACTTTTTGCCTGAGTTCCTGAATAGGCTGGAC
GAGACGGTTGTGTTCCAGCCCTTGTCACACTCGACGCTCAAACAAATTTT
GGTGCATCAGTTGACTGAGGCAACGATGATGTTGCAGGCTGCCGATACGA
ACATTACGGTCTCTTTAGACGAGTCGGCGAATGAGTATTTGCTTCGCAAG
GGTTATGATGTCGTGAATGGTGCTCGACCTTTGCGCCGGTTGATCGAGCG
GATCGTGGTGACGGAGCTGAGTCGTTTGATTGTCGCGGGGCACTTGTGCT
CGAATAGTAAGGTAAATGTGGAGATGGAGCACGTGCTGGGCGAAGGGGAT
TGTTTCAAGTACATTATACAAAGGTGGGAGGGAGGCGTAGGGACCAAAAA
GGAGGGGGAGCCAGGGGTGTTTTGGCAGATGTTGGGTGACTACATGTTGC
CGCAGGACGACGGTGAGGAGGGGCCAGGGGTGGAGGGAGGAAGGTATGAC
GACGAGCTGTGATGGCAGGAGTTCGACAGAATGGATGGAAGACTTTCCTC
GACAAAATTGACATTAAAACCAATAAATGAACATAGAAGAATGAGACACA
CACAAAAAGAAAATAATCACCGTCTGTTGTGCGATCTTTCGGGAAGGGAT
ATGGTAAAAGTTGGGGATGACCAGAGTAAAGAGATATAAGAGACACAA back to topCoding sequence (CDS) from alignment at scaffold_18:301445..304542- >mRNA_6623 ID=mRNA_6623|Name=jgi.p|Nanoce1779_2|597514|organism=Nannochloropsis oceanica|type=CDS|length=2883bp|location=Sequence derived from alignment at scaffold_18:301445..304542- (Nannochloropsis oceanica) ATGGTGCCACGCCACAGGTCCAAGCCCCCACGCCTTCCTCCGCTCTTCCT CCTCCTCCTCGTCTTCAAAATTTTCCTTGCCACCGTCACTGCCTCTGCGA CGCACCAACTCAGTGGCATCTTTCAGAACGTGGACTTTACCAAGGGCTCC CTCGATGTGCTGGAGCGCGCTATTTCCACTGCCAAGTCCAAGGCCAACGC GCAAGTCTCCCCTCTTCACCTGGCAGTGTGTCTCTTTGATGAGGATGCTG AGCACAAGGGGGGACTGGGAGGGCAATTGGTCGCAAAGGCAAACGTGCCC TTGGCCCAGCTACGTCGAAGTCTTGCCTCGGCAATCGCTAAGGATCATCC GACTCAGTCCCCTGCCCCCAGCCAGCTCTCCATTTCCAAGGACCTACAGA CATTGGTCCAAACAGCGGAAAGGATGAGGAGCGACGCCGGGGATTCCTAC GTCGGTGTCCACCACCTCCTGCAGGCACTCGTGCAAGACGCCAAGGCGGG CAAGATACTGAAAGAACAAGGCCTTGCTCTCAATAAAGTTAAGGGAATAG TGGCCTCGTTGCGCAAGGGTCGCAAGACGGAGAGCCGGCAGGAGGGAGAG AGCAACTTTGAAAATTTGAACAAGTACGGACGCGACCTGGTAGCGGATGC CGAGAAAGGCAAACTTGATCCTGTCATTGGTCGCGATGGAGAAATTCGAC GGGTGGTGGAAGTATTGAGCCGGCGGACCAAGAATAATCCGATTTTGCTG GGAGAGCCGGGCGTAGGCAAGACCGCCATCGTTGAGGGACTTGCTTTGCG CATCCTCAATGGGGACGTACCCAAGGCACTCGAGGATAACAAGGTCATAA GCCTTGACATGGGTAGCCTGATTGCCGGAGCGAAGTATCAAGGGGAGTTC GAAGAGCGCCTTAAGGCTGTGTTGGAAGAAGTGGCGCAGGGTGATGGAAA GGTTGTGTTATTCATTGATGAGATCCACACGGTTGTGGGCGCGGGCGCGA CTTCGGGCGCGATGGATGCAAGCAATTTACTTAAACCCATGCTGGCGCGG GGGGAGCTACGGTGCATTGGCGCCACAACGTTGGGAGAGTACAAGAAGTA CATTGAAAAGGATGCGGCGTTCGAAAGGCGCTTTCAGCCCGTGTTTGTCA CCGAGCCCTCTGTTGAGGACACGATTTCCATTCTGCGAGGGTTGAGGGAC CGCTACGAGAGTCATCATGGCGTTCGAATTCTGGATGCTGCTTTGGTGGA AGCCGCGCGGCTCAGCAACCGGTATGTTTCGGGGAGAAAGCTGCCGGATA AGGCCATTGATTTGATGGACGAGGCTTGCGCGAACGTGCGCGTCGACCTA GACTCCCGTCCGCAGGCACTTGATCAAGTGGAGCGGAAGTGTCTTCAACT CGAGATAGAGGCAGCAGCGCTGGCAAAGGAGGAATCAACAGACCCTGCCT CGGCAACGCGATTGGGGGAAGTCCGCCGCGAACTTGAGCAGTTGAAGGAG ACTAGGACGGCACTAGAAGGAGAGTATCTGAAAGCCCAGGGACTGTTGGA GGAACTGGCGAACCTGCGCCGGGAAGTAGAGGACGTCGAATGGGCGGTCG ATGAAAATAAGCGCAAGTTTCAGGTCGAAAAAGCGGCGGAGCTCCAGTAC ACGGAGTTGCCCAAGCTTCAGGAGCGGTACGCTGAGAAACTCGATGAGCT AAAGAAAAGCAGCAATTTGCTGCAAGATTTCGTGGGTCCGGAGCAGATTG CCTCGGTTGTGTCGCGGTGGACCGGCATTCCTGTATCGAAATTGAACCAG GGGGAGCGGGATCGGGTGTTGGGGTTGGAGGACCGCTTGAAATCGCATGT GATTGGCCAAGATGCGGCGATCAAGGCCGTGGCAAGCGCCATTTTGCGAT CGCGCGCAGGCCTCTCGGCAAGCTCGCGCCCGATTGGCTCGTTCCTATTT TTAGGGCCGACAGGTGTGGGCAAGACGCACGTGGCCAAGCAGTTGGCAAA AGAATTGTTTGACGACGAGAAGGCAATGCTTCGTGTTGACATGTCGGAGT ACATGGAGCAGCATACTGTGGCGCGATTGATTGGCTCACCTCCTGGGTAT ATTGGGCATGATGAAGGGGGGCAATTGACGGAAGCGGTGCGTCGTCGGCC ATATAGTGTGATTCTATTCGACGAAGTTGAAAAGGCCCACAAATCTGTGC TTAATGTTTTGTTGCAGATGTTGGACGATGGGCGCTTGACCGATGGCAAG GGTCGCACCGTTGATTTCAGCAACACGGTGATCATCATGACTTCAAATGT GGGGGCCGATGTGATTATGCGTGATGTGCGCGCACACCAAAAATTGTCCA GCAAAGGAATGAAGATGTTGCAGGACCGGTTGCGGTCACACTTTTTGCCT GAGTTCCTGAATAGGCTGGACGAGACGGTTGTGTTCCAGCCCTTGTCACA CTCGACGCTCAAACAAATTTTGGTGCATCAGTTGACTGAGGCAACGATGA TGTTGCAGGCTGCCGATACGAACATTACGGTCTCTTTAGACGAGTCGGCG AATGAGTATTTGCTTCGCAAGGGTTATGATGTCGTGAATGGTGCTCGACC TTTGCGCCGGTTGATCGAGCGGATCGTGGTGACGGAGCTGAGTCGTTTGA TTGTCGCGGGGCACTTGTGCTCGAATAGTAAGGTAAATGTGGAGATGGAG CACGTGCTGGGCGAAGGGGATTGTTTCAAGTACATTATACAAAGGTGGGA GGGAGGCGTAGGGACCAAAAAGGAGGGGGAGCCAGGGGTGTTTTGGCAGA TGTTGGGTGACTACATGTTGCCGCAGGACGACGGTGAGGAGGGGCCAGGG GTGGAGGGAGGAAGGTATGACGACGAGCTGTGA back to top
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