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Properties
Property Name | Value |
TranscriptId | 612435 |
Track | FilteredModels2 |
ProteinId | 612349 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_63 | supercontig | scaffold_63:71104..73881 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10432 ID=mRNA_10432|Name=jgi.p|Nanoce1779_2|612349|organism=Nannochloropsis oceanica|type=mRNA|length=1387bp GAGGAGGAGGAGGAGGAGGAGGGGGAGGAAATGGAGGACCGAGGCTACCC TCTCCCAAGAACATGTTCAACAAGAAGCGGTTTACATTCTTGTCGGGTGG GAGCAAAGAAGGAGGAAAAGATAAAGCCGCAGAGACGGAATATAAAGTGA AGGGGCGAGCGGCACCCGGGCATCTACCTTCGCTATTGCAAACACACGCC TCTTCGGCCTTTTCCCTCGTGACGCCTCCAATAGTGCCTTCCCCTTCCCC CCACCAGATCACCAAGCCCCACCGCATCATCCTCGTCCGTCATGGCGAGA GCACGGGCAATGCCGACGAGCGCGTGTATGTCCAAACCCCTGATTGGAAG GTCCCTCTATCCCCCGTCGGCCACGAGCAAGCCCGCGAGACCGGACGGCA GCTCAAGGCGCTGATAGGGGACGAGCCGCTCTACATCTATACCTCACCCT ACAGACGGACGAAGCAGACCCTGAGCGACATGTTGGAGTCGCTCGAGGAC AATCTTAAGGTCGGCATCCGGGAGGAGCCGCGCATCACGGAGCAGCAATT CGGCAACTTCCAATGCCACCAGCTGGTCCAGCAGGCAAAGAAGGATCGAT CCAACTTCGGTCGCTTCTACTTCCGGTTTCCAAACGGCGAGTCTGGCCTG GATGTGTACACGCGCGTGACCTCCTTTATCTCAACCATGTTCAGGGACTT CGCGGATGGGCACATCTGTAGGCCCGACCTGAACATCATCATCGTTACGC ACGGCCTCACCCTCAGGCTGGTGCGCCACGAGGGGAGAGGAGGGAGGGAG GAGAGGGAGGGAAAAGGGGTCGGGAAAAGGAAGTGAAGATGAATCTGGCG GTGGCATGTAAGTGCACCTCCATTTACTCCTTTCTTGTTTCCCCCCTTCC CCCCCCAGCTGCTAATGCGCTGGTTCAAGCTGACGGTGGAGACCTTCGAG AGCACCACGAACCCGCCCAACGGCTCCCTTGTGGTCATGACCCGCAAGGA GGGTCCGGCAGGAGGGAGGTCGGGGGGAGGGGTGTACGAGATGGCGCCTG AGTCTGCGGCCTTAATCTCGCTCAGCTGCGACTCGGTCCCCGTTGGCGCC TCGCTCAATACTCCATGCAGCTTCGACGACAGCAGAGGGGGGGTGGAGGA AGGGGAATGTGACAGAGAGTCAGCGAGGCCTCTTTCGGCCAGTATCCAAA GCCTGTCCATTGCGAAGTAGCCTCGAAAGATTTTTTGGAGGGACGAAAGG GTCTGCAAGTAGAAGAGAAGAGGGTTTGGAGAATCCCTACCCATGGAAAG AGATCTAGGAAATCCATACAATGAACATACGATTAATTGCAGAATTCGAA GGTGCACGCCATCTTCGTGCCTACAATAGAGATGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|612349 >mRNA_10432-protein ID=mRNA_10432-protein|Name=jgi.p|Nanoce1779_2|612349|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp MFNKKRFTFLSGGSKEGGKDKAAETEYKVKGRAAPGHLPSLLQTHASSAF SLVTPPIVPSPSPHQITKPHRIILVRHGESTGNADERVYVQTPDWKVPLS PVGHEQARETGRQLKALIGDEPLYIYTSPYRRTKQTLSDMLESLEDNLKV GIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYT RVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLVRHEGRGGREEREG KGVGKRK* back to topmRNA from alignment at scaffold_63:71104..73881+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10432 ID=mRNA_10432|Name=jgi.p|Nanoce1779_2|612349|organism=Nannochloropsis oceanica|type=mRNA|length=2778bp|location=Sequence derived from alignment at scaffold_63:71104..73881+ (Nannochloropsis oceanica) GAGGAGGAGGAGGAGGAGGAGGGGGAGGAAATGGAGGACCGAGGCTACCC
TCTCCCAAGAACATGTTCAACAAGAAGCGGTTTACATTCTTGTCGGGTGG
GAGCAAAGAAGGAGGAAAAGATAAAGCCGCAGAGACGGAATATAAAGTGA
AGGGGCGAGCGGCACCCGGGCATCTACCTTCGCTATTGCAAACACACGCC
TCTTCGGCCTTTTCCCTCGTGACGCCTCCAATAGTGCCTTCGTGAGTCGA
ACGGGGGGGATACCATGGGATGTGGGGGAATGAGGGGAGGATGTGAAAGA
GAACGAGGACGAGGAGAAGTCATACGATAAGACAGAAGGCACATATACAA
AAGCTGCTACTCCACCACTCTACCACTCTCCACCTCACGCTCCCTTCCTC
CCTCCCCCTTTCTCTTCCGTTCAAAGCCCTTCCCCCCACCAGATCACCAA
GCCCCACCGCATCATCCTCGTCCGTCATGGCGAGAGCACGGGCAATGCCG
ACGAGCGCGTGTATGTCCAAACCCCTGATTGGAAGGTAGGGAGGGAGCGA
GGGCGGGCGGGAGACGGCGGGCGAGCGGGAGGGAAGGAAAGATGATTCTT
TTTTCCTGATGCCACAATCGTCCCTATACAATTTTCATTTGTACGTGACC
GAGAATGAACCAATTATGTACGGGAGAATACACACCGTCCTTCTTGCGAC
TGTAGCCCCTCGCTCTTCGCGGCTTTTCACCTCCCACCCTCCCCACCTGC
CCAGGTCCCTCTATCCCCCGTCGGCCACGAGCAAGCCCGCGAGACCGGAC
GGCAGCTCAAGGCGCTGATAGGGGACGAGCCGCTCTACATCTATACCTCA
CCCTACAGACGGTGCGGCGGGAGGAAGGGAGGGAGGGAGGAATGTGGCGT
GGTGATGAGTGCCCGTTCCGATCTTGTCCTGACGTCGGACTATCCTTTTC
CTTGAGAGGTCTTGAGGACCCTTATGGAGGACCAAATACCCATTTTGCTC
ATCCGCCTCCCTCCCTTACTCCCCCCCTTCCCGTCAGGACGAAGCAGACC
CTGAGCGACATGTTGGAGTCGCTCGAGGACAATCTTAAGGTCGGCATCCG
GGAGGAGCCGCGCATCACGGAGCAGGTCTACAAAAGGGAGGGGGGAGTGC
GGGCTGTGGGGGGATCTGACCGGACGAGCACCCACAGCGAAATAGGAGAG
CGAGACCGCCCTCCTCCTCACTTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCTCTTAGCAATTCGGCAACTTCCAATGCCACCAGCTGGTCCAGCAGGC
AAAGAAGGATCGATCCAACTTCGGTCGCTTCTACTTCCGGTCAGCGCGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGATGGATTATGATGAAAATGACAAGGAAGAGGGG
GACAAGCTTGGAGATCCGAGTAGAAAGGATGGATATCCGTAATAATCTTC
CCTCAGCCTTCCCTCCCTCTCTCCCTTCCTCCGTCCCACCCATCCCCTTG
CCATCAGGTTTCCAAACGGCGAGTCTGGCCTGGATGTGTACACGCGCGTG
ACCTCCTTTATCTCAACCATGTTCAGGTGCAGGCGGGCAGGCAGGCAGAT
AAAGAGGGAGGGAGAATGGGACGGAACCAACCTTATTGTATCATATCAAT
ATGGCAAACATATTGAATCTTATTGTATCGTATCAATATGGTAAATATAT
TGAATCACCTCAACAGGGACTTCGCGGATGGGCACATCTGTAGGCCCGAC
CTGAACATCATCATCGTTACGCACGGCCTCACCCTCAGGCTGGTGCGCCA
CGAGGGGAGAGGAGGGAGGGAGGAGAGGGAGGGAAAAGGGGTCGGGAAAA
GGAAGTGAAGATGAATCTGGCGGTGGCATGTAAGTGCACCTCCATTTACT
CCTTTCTTGTTTCCCCCCTTCCCCCCCCAGCTGCTAATGCGCTGGTTCAA
GCTGACGGTGGAGACCTTCGAGAGCACCACGAACCCGCCCAACGGCTCCC
TTGTGGTCATGACCCGCAAGGAGGGTCCGGCAGGAGGGAGGTCGGGGGGA
GGGGTGTACGAGATGGCGCCTGAGTCTGCGGCCTTAATCTCGCTCAGGCA
AGTGGGGAGGGGGGGGCGGAAAGGAGGGAAGGAGGGGGTAGAAGGGGCTG
CAGGGCCACTGTGTGAGATGATTTCTCCTGTGGGCCGTATTCCTCTCCTT
TGCACCGACCATCCATTGCCCTGCTCGATCGGTCTCACCTCTTCCTTGAT
CTGACTACTCCCACAGCTGCGACTCGGTCCCCGTTGGCGCCTCGCTCAAT
ACTCCATGCAGCTTCGACGACAGCAGAGGGGGGGTGGAGGAAGGGGAATG
TGACAGAGAGTCAGCGAGGCCTCTTTCGGCCAGTATCCAAAGCCTGTCCA
TTGCGAAGTAGCCTCGAAAGATTTTTTGGAGGGACGAAAGGGTCTGCAAG
TAGAAGAGAAGAGGGTTTGGAGAATCCCTACCCATGGAAAGAGATCTAGG
AAATCCATACAATGAACATACGATTAATTGCAGAATTCGAAGGTGCACGC
CATCTTCGTGCCTACAATAGAGATGAGG back to topCoding sequence (CDS) from alignment at scaffold_63:71104..73881+ >mRNA_10432 ID=mRNA_10432|Name=jgi.p|Nanoce1779_2|612349|organism=Nannochloropsis oceanica|type=CDS|length=5418bp|location=Sequence derived from alignment at scaffold_63:71104..73881+ (Nannochloropsis oceanica) ATGTTCAACAAGAAGCGGTTTACATTCTTGTCGGGTGGGAGCAAAGAAGG AGGAAAAGATAAAGCCGCAGAGACGGAATATAAAGTGAAGGGGCGAGCGG CACCCGGGCATCTACCTTCGCTATTGCAAACACACGCCTCTTCGGCCTTT TCCCTCGTGACGCCTCCAATAGTGCCTTCCCCTTCCCCCCACCAGATCAC CAAGCCCCACCGCATCATCCTCGTCCGTCATGGCGAGAGCACGGGCAATG CCGACGAGCGCGTGTATGTCCAAACCCCTGATTGGAAGGTCCCTCTATCC CCCGTCGGCCACGAGCAAGCCCGCGAGACCGGACGGCAGCTCAAGGCGCT GATAGGGGACGAGCCGCTCTACATCTATACCTCACCCTACAGACGGACGA AGCAGACCCTGAGCGACATGTTGGAGTCGCTCGAGGACAATCTTAAGGTC GGCATCCGGGAGGAGCCGCGCATCACGGAGCAGCAATTCGGCAACTTCCA ATGCCACCAGCTGGTCCAGCAGGCAAAGAAGGATCGATCCAACTTCGGTC GCTTCTACTTCCGGTTTCCAAACGGCGAGTCTGGCCTGGATGTGTACACG CGCGTGACCTCCTTTATCTCAACCATGTTCAGGGACTTCGCGGATGGGCA CATCTGTAGGCCCGACCTGAACATCATCATCGTTACGCACGGCCTCACCC TCAGGCTGGTGCGCCACGAGGGGAGAGGAGGGAGGGAGGAGAGGGAGGGA AAAGGGGTCGGGAAAAGGAAGTGAATGTTCAACAAGAAGCGGTTTACATT CTTGTCGGGTGGGAGCAAAGAAGGAGGAAAAGATAAAGCCGCAGAGACGG AATATAAAGTGAAGGGGCGAGCGGCACCCGGGCATCTACCTTCGCTATTG CAAACACACGCCTCTTCGGCCTTTTCCCTCGTGACGCCTCCAATAGTGCC TTCCCCTTCCCCCCACCAGATCACCAAGCCCCACCGCATCATCCTCGTCC GTCATGGCGAGAGCACGGGCAATGCCGACGAGCGCGTGTATGTCCAAACC CCTGATTGGAAGGTCCCTCTATCCCCCGTCGGCCACGAGCAAGCCCGCGA GACCGGACGGCAGCTCAAGGCGCTGATAGGGGACGAGCCGCTCTACATCT ATACCTCACCCTACAGACGGACGAAGCAGACCCTGAGCGACATGTTGGAG TCGCTCGAGGACAATCTTAAGGTCGGCATCCGGGAGGAGCCGCGCATCAC GGAGCAGCAATTCGGCAACTTCCAATGCCACCAGCTGGTCCAGCAGGCAA AGAAGGATCGATCCAACTTCGGTCGCTTCTACTTCCGGTTTCCAAACGGC GAGTCTGGCCTGGATGTGTACACGCGCGTGACCTCCTTTATCTCAACCAT GTTCAGGGACTTCGCGGATGGGCACATCTGTAGGCCCGACCTGAACATCA TCATCGTTACGCACGGCCTCACCCTCAGGCTGGTGCGCCACGAGGGGAGA GGAGGGAGGGAGGAGAGGGAGGGAAAAGGGGTCGGGAAAAGGAAGTGAAT GTTCAACAAGAAGCGGTTTACATTCTTGTCGGGTGGGAGCAAAGAAGGAG GAAAAGATAAAGCCGCAGAGACGGAATATAAAGTGAAGGGGCGAGCGGCA CCCGGGCATCTACCTTCGCTATTGCAAACACACGCCTCTTCGGCCTTTTC CCTCGTGACGCCTCCAATAGTGCCTTCCCCTTCCCCCCACCAGATCACCA AGCCCCACCGCATCATCCTCGTCCGTCATGGCGAGAGCACGGGCAATGCC GACGAGCGCGTGTATGTCCAAACCCCTGATTGGAAGGTCCCTCTATCCCC CGTCGGCCACGAGCAAGCCCGCGAGACCGGACGGCAGCTCAAGGCGCTGA TAGGGGACGAGCCGCTCTACATCTATACCTCACCCTACAGACGGACGAAG CAGACCCTGAGCGACATGTTGGAGTCGCTCGAGGACAATCTTAAGGTCGG CATCCGGGAGGAGCCGCGCATCACGGAGCAGCAATTCGGCAACTTCCAAT GCCACCAGCTGGTCCAGCAGGCAAAGAAGGATCGATCCAACTTCGGTCGC TTCTACTTCCGGTTTCCAAACGGCGAGTCTGGCCTGGATGTGTACACGCG CGTGACCTCCTTTATCTCAACCATGTTCAGGGACTTCGCGGATGGGCACA TCTGTAGGCCCGACCTGAACATCATCATCGTTACGCACGGCCTCACCCTC AGGCTGGTGCGCCACGAGGGGAGAGGAGGGAGGGAGGAGAGGGAGGGAAA AGGGGTCGGGAAAAGGAAGTGAATGTTCAACAAGAAGCGGTTTACATTCT TGTCGGGTGGGAGCAAAGAAGGAGGAAAAGATAAAGCCGCAGAGACGGAA TATAAAGTGAAGGGGCGAGCGGCACCCGGGCATCTACCTTCGCTATTGCA AACACACGCCTCTTCGGCCTTTTCCCTCGTGACGCCTCCAATAGTGCCTT CCCCTTCCCCCCACCAGATCACCAAGCCCCACCGCATCATCCTCGTCCGT CATGGCGAGAGCACGGGCAATGCCGACGAGCGCGTGTATGTCCAAACCCC TGATTGGAAGGTCCCTCTATCCCCCGTCGGCCACGAGCAAGCCCGCGAGA CCGGACGGCAGCTCAAGGCGCTGATAGGGGACGAGCCGCTCTACATCTAT ACCTCACCCTACAGACGGACGAAGCAGACCCTGAGCGACATGTTGGAGTC GCTCGAGGACAATCTTAAGGTCGGCATCCGGGAGGAGCCGCGCATCACGG AGCAGCAATTCGGCAACTTCCAATGCCACCAGCTGGTCCAGCAGGCAAAG AAGGATCGATCCAACTTCGGTCGCTTCTACTTCCGGTTTCCAAACGGCGA GTCTGGCCTGGATGTGTACACGCGCGTGACCTCCTTTATCTCAACCATGT TCAGGGACTTCGCGGATGGGCACATCTGTAGGCCCGACCTGAACATCATC ATCGTTACGCACGGCCTCACCCTCAGGCTGGTGCGCCACGAGGGGAGAGG AGGGAGGGAGGAGAGGGAGGGAAAAGGGGTCGGGAAAAGGAAGTGAATGT TCAACAAGAAGCGGTTTACATTCTTGTCGGGTGGGAGCAAAGAAGGAGGA AAAGATAAAGCCGCAGAGACGGAATATAAAGTGAAGGGGCGAGCGGCACC CGGGCATCTACCTTCGCTATTGCAAACACACGCCTCTTCGGCCTTTTCCC TCGTGACGCCTCCAATAGTGCCTTCCCCTTCCCCCCACCAGATCACCAAG CCCCACCGCATCATCCTCGTCCGTCATGGCGAGAGCACGGGCAATGCCGA CGAGCGCGTGTATGTCCAAACCCCTGATTGGAAGGTCCCTCTATCCCCCG TCGGCCACGAGCAAGCCCGCGAGACCGGACGGCAGCTCAAGGCGCTGATA GGGGACGAGCCGCTCTACATCTATACCTCACCCTACAGACGGACGAAGCA GACCCTGAGCGACATGTTGGAGTCGCTCGAGGACAATCTTAAGGTCGGCA TCCGGGAGGAGCCGCGCATCACGGAGCAGCAATTCGGCAACTTCCAATGC CACCAGCTGGTCCAGCAGGCAAAGAAGGATCGATCCAACTTCGGTCGCTT CTACTTCCGGTTTCCAAACGGCGAGTCTGGCCTGGATGTGTACACGCGCG TGACCTCCTTTATCTCAACCATGTTCAGGGACTTCGCGGATGGGCACATC TGTAGGCCCGACCTGAACATCATCATCGTTACGCACGGCCTCACCCTCAG GCTGGTGCGCCACGAGGGGAGAGGAGGGAGGGAGGAGAGGGAGGGAAAAG GGGTCGGGAAAAGGAAGTGAATGTTCAACAAGAAGCGGTTTACATTCTTG TCGGGTGGGAGCAAAGAAGGAGGAAAAGATAAAGCCGCAGAGACGGAATA TAAAGTGAAGGGGCGAGCGGCACCCGGGCATCTACCTTCGCTATTGCAAA CACACGCCTCTTCGGCCTTTTCCCTCGTGACGCCTCCAATAGTGCCTTCC CCTTCCCCCCACCAGATCACCAAGCCCCACCGCATCATCCTCGTCCGTCA TGGCGAGAGCACGGGCAATGCCGACGAGCGCGTGTATGTCCAAACCCCTG ATTGGAAGGTCCCTCTATCCCCCGTCGGCCACGAGCAAGCCCGCGAGACC GGACGGCAGCTCAAGGCGCTGATAGGGGACGAGCCGCTCTACATCTATAC CTCACCCTACAGACGGACGAAGCAGACCCTGAGCGACATGTTGGAGTCGC TCGAGGACAATCTTAAGGTCGGCATCCGGGAGGAGCCGCGCATCACGGAG CAGCAATTCGGCAACTTCCAATGCCACCAGCTGGTCCAGCAGGCAAAGAA GGATCGATCCAACTTCGGTCGCTTCTACTTCCGGTTTCCAAACGGCGAGT CTGGCCTGGATGTGTACACGCGCGTGACCTCCTTTATCTCAACCATGTTC AGGGACTTCGCGGATGGGCACATCTGTAGGCCCGACCTGAACATCATCAT CGTTACGCACGGCCTCACCCTCAGGCTGGTGCGCCACGAGGGGAGAGGAG GGAGGGAGGAGAGGGAGGGAAAAGGGGTCGGGAAAAGGAAGTGAATGTTC AACAAGAAGCGGTTTACATTCTTGTCGGGTGGGAGCAAAGAAGGAGGAAA AGATAAAGCCGCAGAGACGGAATATAAAGTGAAGGGGCGAGCGGCACCCG GGCATCTACCTTCGCTATTGCAAACACACGCCTCTTCGGCCTTTTCCCTC GTGACGCCTCCAATAGTGCCTTCCCCTTCCCCCCACCAGATCACCAAGCC CCACCGCATCATCCTCGTCCGTCATGGCGAGAGCACGGGCAATGCCGACG AGCGCGTGTATGTCCAAACCCCTGATTGGAAGGTCCCTCTATCCCCCGTC GGCCACGAGCAAGCCCGCGAGACCGGACGGCAGCTCAAGGCGCTGATAGG GGACGAGCCGCTCTACATCTATACCTCACCCTACAGACGGACGAAGCAGA CCCTGAGCGACATGTTGGAGTCGCTCGAGGACAATCTTAAGGTCGGCATC CGGGAGGAGCCGCGCATCACGGAGCAGCAATTCGGCAACTTCCAATGCCA CCAGCTGGTCCAGCAGGCAAAGAAGGATCGATCCAACTTCGGTCGCTTCT ACTTCCGGTTTCCAAACGGCGAGTCTGGCCTGGATGTGTACACGCGCGTG ACCTCCTTTATCTCAACCATGTTCAGGGACTTCGCGGATGGGCACATCTG TAGGCCCGACCTGAACATCATCATCGTTACGCACGGCCTCACCCTCAGGC TGGTGCGCCACGAGGGGAGAGGAGGGAGGGAGGAGAGGGAGGGAAAAGGG GTCGGGAAAAGGAAGTGA back to top
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