jgi.p|Nanoce1779_2|626123, gene_7771 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626123
Unique Namegene_7771
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:286196..288458 +

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Properties
Property NameValue
TranscriptId626209
ProteinId626123
Product nameaspartyl-tRNA synthetase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:286196..288458 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0004815aspartate-tRNA ligase activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006422aspartyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL036ncniL036Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01200NO17G01200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626123mRNA_7771-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626123mRNA_7771Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626123

>mRNA_7771-protein ID=mRNA_7771-protein|Name=jgi.p|Nanoce1779_2|626123|organism=Nannochloropsis oceanica|type=polypeptide|length=606bp
MATKEELDTLIKAKGDEIRQLKADKADKEVIMAQVTGLNELKAQYKQLTG
EDYGPPPAPSKKKESKNDDSAVAGGPKIDPRKAAKEARAAKRATGGAVAP
APGSSRTGTAPEATSAAATVTTVSEEREKYGILPLIQSQVMTNKVWARIS
DLSPKRAGQRVLLRGRVHTSRAVGKGVFLLLRQGIATVQAVVYQGAKVNK
GMVKFAGGVSKESIVDLVGILTAPREPVESATAKMVELQVEEMYVVSAAE
NVLPFQLEDASRPDLQEGEDNVEMPSVGMDNRLNYRWIDTRTAANQAIFR
IQHGVSQLFREFLSERGFIEIHTPKLLGGASESGSSVFALNYFDQQACLA
QSPQLYKQIACACGGFEKVFEIGPVFRAEKSFTHRHLCEFTGLDFEMAIH
EHYYEVLELFSDLFTFIFDNLSSRFAAELEAVNKQHPFEPLQFCRPSLRL
SFAEGVALLREAGFEASEHEDLDTEKEKALGRIVKEKYQTDFYMMDRYPL
SVRPFYTMPCPDDPTLSNSYDMFIRGEEIVSGAQRIHDVELLGQRIDAMG
VPRETLRTYIDAFRQGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDP
KRLAP*
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Synonyms
Publications