jgi.p|Nanoce1779_2|660674, gene_10028 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|660674
Unique Namegene_10028
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_42:82504..85035 -

Link to JBrowse

Properties
Property NameValue
TranscriptId660760
ProteinId660674
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_42supercontigscaffold_42:82504..85035 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL062ncniL062Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660674mRNA_10028-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660674mRNA_10028Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|660674

>mRNA_10028-protein ID=mRNA_10028-protein|Name=jgi.p|Nanoce1779_2|660674|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MTMMDVVDASIQPRDSRNQSLATDLVPGAVPRDDDEEEPTPVKRLDAAFE
VVTKQNPLDDAPALQVALRVRPLLPGLAEKSCMQIISDRKVHTTTPPSSV
YFKITGGQVKEFTFHKVFGPESSQEALYIQTTQPLVDALWLGKSGLLFAY
GVTNAGKTHTIMGKEGEKEAGVLPRALKDLFARVEREEEGRRMVLEEGTK
GGGGGGGAGEATPTPMCSVVCSYLEVYNDQVYDLLAEDPVGAGSKRPALK
PADRGGKVEVGRTVMLLCVNPSERDYDETMHVLGQGAGVQEVRVVRDGGR
ERRAALLLGGVRGWGPDGRRKGGGKEGGGGEDMMGGGW*
back to top
Synonyms
Publications