EWM20312.1, cds10362 (CDS) Nannochloropsis gaditana

Overview
NameEWM20312.1
Unique Namecds10362
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037279.1:5498..5612 +
Alignment locationKK037279.1:5717..5796 +
Alignment locationKK037279.1:5874..5969 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20312.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101431g1.5767.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037279.1supercontigKK037279.1:5498..5612 +
KK037279.1supercontigKK037279.1:5717..5796 +
KK037279.1supercontigKK037279.1:5874..5969 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20312.1 vs. NCBI_GenBank
Match: gi|585099798|gb|EWM20312.1| (hypothetical protein Naga_101431g1 [Nannochloropsis gaditana])

HSP 1 Score: 195.282 bits (495), Expect = 3.113e-63
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MPHRNPVSPPCTRRQGYKIAVSHSGGGFLSIVGSPWYSSLHAFFSSRPSVRVILVLHKDPSTKRQPRADMTNLIRPVALVDLAAAFARMGRPSSNR 96
            MPHRNPVSPPCTRRQGYKIAVSHSGGGFLSIVGSPWYSSLHAFFSSRPSVRVILVLHKDPSTKRQPRADMTNLIRPVALVDLAAAFARMGRPSSNR
Sbjct:    1 MPHRNPVSPPCTRRQGYKIAVSHSGGGFLSIVGSPWYSSLHAFFSSRPSVRVILVLHKDPSTKRQPRADMTNLIRPVALVDLAAAFARMGRPSSNR 96
The following BLAST results are available for this feature:
BLAST of EWM20312.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585099798|gb|EWM20312.1|3.113e-63100.00hypothetical protein Naga_101431g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10394rna10394Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications