EWM20434.1, cds10239 (CDS) Nannochloropsis gaditana

Overview
NameEWM20434.1
Unique Namecds10239
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:43879..44067 -
Alignment locationKK037268.1:43525..43618 -
Alignment locationKK037268.1:43347..43381 -
Alignment locationKK037268.1:43282..43299 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20434.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101618g1.5781.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:43879..44067 -
KK037268.1supercontigKK037268.1:43525..43618 -
KK037268.1supercontigKK037268.1:43347..43381 -
KK037268.1supercontigKK037268.1:43282..43299 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20434.1 vs. NCBI_GenBank
Match: gi|585100040|gb|EWM20434.1| (hypothetical protein Naga_101618g1 [Nannochloropsis gaditana])

HSP 1 Score: 229.95 bits (585), Expect = 2.045e-76
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 
Query:    1 MILRSSTMEGSVATSGTKSQRRHTLPSSSSIFPIRVLLASYFVLAALADDPLINMYMRGSGDRVPGNFPYALHFVPDIPAWSTGELWFAVLSDTGLHDLQRQCGQDRSHPR 111
            MILRSSTMEGSVATSGTKSQRRHTLPSSSSIFPIRVLLASYFVLAALADDPLINMYMRGSGDRVPGNFPYALHFVPDIPAWSTGELWFAVLSDTGLHDLQRQCGQDRSHPR
Sbjct:    1 MILRSSTMEGSVATSGTKSQRRHTLPSSSSIFPIRVLLASYFVLAALADDPLINMYMRGSGDRVPGNFPYALHFVPDIPAWSTGELWFAVLSDTGLHDLQRQCGQDRSHPR 111
The following BLAST results are available for this feature:
BLAST of EWM20434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100040|gb|EWM20434.1|2.045e-76100.00hypothetical protein Naga_101618g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10270rna10270Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications