rna10219, rna10219 (mRNA) Nannochloropsis gaditana

Overview
Namerna10219
Unique Namerna10219
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length699
Alignment locationKK037266.1:42844..44169 -

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Properties
Property NameValue
Productwd repeat-containing protein 92
Orig transcript idgnl|cribi|Naga_101308g2.7685.mrna
Orig protein idgnl|cribi|Naga_101308g2.7685
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:42844..44169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101308g2gene9923Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10219rna10219-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20485.1cds10188Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10219 ID=rna10219|Name=rna10219|organism=Nannochloropsis gaditana|type=mRNA|length=699bp
ATGCTTCCTCCCTTCCCACCTCCCTCCTTCTCTCCCTCCTGCCTGCCTCC
TCTCTTTCTTTCCCCTTTTTCCCCTTGCAATGCGTCCAACGACAGCGAGC
GGGTGGTGGCAGCAGGGTACGACAACGGCGACGTCAAGCTCTTCGACCTC
CGCACGAGCAGTCTACGTCATGAAAACAACGTGGGGAACGGCGTCACCTC
CCTTGAGTTTGACCGATGGGACATTCCTATGAATAAGCTCGTCATCACCA
TGCTGGAATCCTCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCG
GAGACGATGGAAGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGG
GGTGGTCTTCTCGATCAAGCAGAAGACTCACCACAACGCCACGGTCTGGA
GTGCGCGGCACCTGCCTCAGAATCGGGACGTTTTTGTCACGTGCGGAGGG
GAAGGAGGATTGGCGCTTTGGCAATACCACTACGCCACCCCTTCTTCCTC
GTCCTCCCCTTCCACCACCACCCCATCTTCGACCTCTGGCCCCGACCCCG
GCGCCCTTTCCCTCCTGAACGCGCGGCTTCTGTCTCCTCAGCCTCTGGTC
GCCTTCGATTGGCACAGGGAGAAGACCGGTCTCTGCGCCATCGCCTCTTT
GGATCAATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAA
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protein sequence of rna10219

>rna10219-protein ID=rna10219-protein|Name=rna10219|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MSIALIREKGGEQSHVVKINLNPKRLCYGRPKNTEKRKTSFIGPATMVNI
KDGPQFIPHTQTNLSYTPHDVKWIPCSARLVSVGATASGKGKLEIYALSG
GALKKTAETVHAQSLRCATFGAATLEERKLATGDWNGDLCVWYVVAEPAV
PSLPPSLPPSLAWSLPSSILFLSPPQIARLHSLFLAFST
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mRNA from alignment at KK037266.1:42844..44169-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10219 ID=rna10219|Name=rna10219|organism=Nannochloropsis gaditana|type=mRNA|length=1326bp|location=Sequence derived from alignment at KK037266.1:42844..44169- (Nannochloropsis gaditana)
ATGTCAATAGCATTGATTAGGTAAGACTCTGTGTCCTACATTCATGAACC
TTGTAAAAAGAGAGGCGTGTGATCGGTTTTCCCATTGACCCAGTTTTGTC
CTCTCGATCCCCGACCTCCTGGCATATGGCCATGCTGCATTCCGACGTAA
TCCATCTCCCAACCCGCAAAAAAACACCAAAACCCTGCCTGGAGGGCCGA
GATAGCCTTCTAATCAGAAAAAAGAATGAGAGGTCGTAAAGACATGGCGT
TGGGCTGGTGATTTTATCGAGATCGGTTGCGTCTCCTCTTGCAGATTGAA
CGTTGGTATTGCAGAGAAAAGGGAGGAGAGCAGTCCCATGTTGTAAAAAT
AAATTTAAATCCGAAAAGATTGTGTTACGGACGTCCCAAAAACACAGAAA
AGCGTAAAACATCCTTCATCGGTAAAGTATACACAGAAGGCAGCAACTTG
TCGAAAGATGCTTTTTTTGGGGGGGCCTGGAAGATGCAAAAGCGGGGGGT
ACCCAGACTTTTTGCCTCAGGCCTCAACTTTTGGTCTTTACCCCCTTGCC
AAACACAGGGCCAGCCACCATGGTGAACATCAAGGACGGTCCGCAATTCA
TCCCTCACACGCAAACGAACCTATCGTACACACCTCACGACGTGAAATGG
ATTCCATGCTCTGCGCGTCTTGTGTCGGTGGGGGCGACGGCAAGTGGAAA
AGGAAAGCTGGAAATATACGCGCTGAGTGGAGGAGCATTGAAAAAGACAG
CGGAAACAGGTTAGTTATGACAAATTTGATAAGCAGAGGCAATATCGTGA
GATTTTAAAATGGGAGGAAGGCTTTAATTTGTGTCTGGCGGTGGTGGTCT
CCATAATGGCCCCGTATGCAGGATTTGACTTTCGTGGCATTTCTTTTCCT
GAGTGCCCCATATTCAACTCTTCAAAGCCCTTTCCGTTTCCGTATTCCTT
ATTGCCTGTGAGAATCAGTGCTAGGTCCGTATAGGAATCTGGCGTCTCTA
CTTTACGAGCACCTGTCAACTTTTTTTTTCCATTCTCTGCTTTATCCATT
TTGGGGTTGACTCCCACGCCTTCCATCGATCCAGTCCACGCACAGAGCCT
TCGATGTGCCACGTTCGGAGCAGCAACGCTGGAGGAGAGGAAACTCGCGA
CTGGGGATTGGAACGGGGACCTGTGTGTCTGGTATGTCGTGGCTGAACCT
GCTGTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCGTGGTCCCT
CCCTTCCTCGATCCTCTTCCTCTCTCCGCCGCAGATTGCTCGTCTGCATT
CACTTTTCCTTGCTTTCTCGACATAG
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Coding sequence (CDS) from alignment at KK037266.1:42844..44169-

>rna10219 ID=rna10219|Name=rna10219|organism=Nannochloropsis gaditana|type=CDS|length=2280bp|location=Sequence derived from alignment at KK037266.1:42844..44169- (Nannochloropsis gaditana)
TCCACGCACAGAGCCTTCGATGTGCCACGTTCGGAGCAGCAACGCTGGAG
GAGAGGAAACTCGCGACTGGGGATTGGAACGGGGACCTGTGTGTCTGGTA
TGTCGTGGCTGAACCTGCTGTCCCTTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCGCGTGGTCCCTCCCTTCCTCGATCCTCTTCCTCTCTCCGCCGCAG
ATTGCTCGTCTGCATTCACTTTTCCTTGCTTTCTCGACATAGGGCCAGCC
ACCATGGTGAACATCAAGGACGGTCCGCAATTCATCCCTCACACGCAAAC
GAACCTATCGTACACACCTCACGACGTGAAATGGATTCCATGCTCTGCGC
GTCTTGTGTCGGTGGGGGCGACGGCAAGTGGAAAAGGAAAGCTGGAAATA
TACGCGCTGAGTGGAGGAGCATTGAAAAAGACAGCGGAAACAGAGAAAAG
GGAGGAGAGCAGTCCCATGTTGTAAAAATAAATTTAAATCCGAAAAGATT
GTGTTACGGACGTCCCAAAAACACAGAAAAGCGTAAAACATCCTTCATCG
ATGTCAATAGCATTGATTAGTCCACGCACAGAGCCTTCGATGTGCCACGT
TCGGAGCAGCAACGCTGGAGGAGAGGAAACTCGCGACTGGGGATTGGAAC
GGGGACCTGTGTGTCTGGTATGTCGTGGCTGAACCTGCTGTCCCTTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCGCGTGGTCCCTCCCTTCCTCGATCC
TCTTCCTCTCTCCGCCGCAGATTGCTCGTCTGCATTCACTTTTCCTTGCT
TTCTCGACATAGGGCCAGCCACCATGGTGAACATCAAGGACGGTCCGCAA
TTCATCCCTCACACGCAAACGAACCTATCGTACACACCTCACGACGTGAA
ATGGATTCCATGCTCTGCGCGTCTTGTGTCGGTGGGGGCGACGGCAAGTG
GAAAAGGAAAGCTGGAAATATACGCGCTGAGTGGAGGAGCATTGAAAAAG
ACAGCGGAAACAGAGAAAAGGGAGGAGAGCAGTCCCATGTTGTAAAAATA
AATTTAAATCCGAAAAGATTGTGTTACGGACGTCCCAAAAACACAGAAAA
GCGTAAAACATCCTTCATCGATGTCAATAGCATTGATTAGTCCACGCACA
GAGCCTTCGATGTGCCACGTTCGGAGCAGCAACGCTGGAGGAGAGGAAAC
TCGCGACTGGGGATTGGAACGGGGACCTGTGTGTCTGGTATGTCGTGGCT
GAACCTGCTGTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCGTG
GTCCCTCCCTTCCTCGATCCTCTTCCTCTCTCCGCCGCAGATTGCTCGTC
TGCATTCACTTTTCCTTGCTTTCTCGACATAGGGCCAGCCACCATGGTGA
ACATCAAGGACGGTCCGCAATTCATCCCTCACACGCAAACGAACCTATCG
TACACACCTCACGACGTGAAATGGATTCCATGCTCTGCGCGTCTTGTGTC
GGTGGGGGCGACGGCAAGTGGAAAAGGAAAGCTGGAAATATACGCGCTGA
GTGGAGGAGCATTGAAAAAGACAGCGGAAACAGAGAAAAGGGAGGAGAGC
AGTCCCATGTTGTAAAAATAAATTTAAATCCGAAAAGATTGTGTTACGGA
CGTCCCAAAAACACAGAAAAGCGTAAAACATCCTTCATCGATGTCAATAG
CATTGATTAGTCCACGCACAGAGCCTTCGATGTGCCACGTTCGGAGCAGC
AACGCTGGAGGAGAGGAAACTCGCGACTGGGGATTGGAACGGGGACCTGT
GTGTCTGGTATGTCGTGGCTGAACCTGCTGTCCCTTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCGCGTGGTCCCTCCCTTCCTCGATCCTCTTCCTCTC
TCCGCCGCAGATTGCTCGTCTGCATTCACTTTTCCTTGCTTTCTCGACAT
AGGGCCAGCCACCATGGTGAACATCAAGGACGGTCCGCAATTCATCCCTC
ACACGCAAACGAACCTATCGTACACACCTCACGACGTGAAATGGATTCCA
TGCTCTGCGCGTCTTGTGTCGGTGGGGGCGACGGCAAGTGGAAAAGGAAA
GCTGGAAATATACGCGCTGAGTGGAGGAGCATTGAAAAAGACAGCGGAAA
CAGAGAAAAGGGAGGAGAGCAGTCCCATGTTGTAAAAATAAATTTAAATC
CGAAAAGATTGTGTTACGGACGTCCCAAAAACACAGAAAAGCGTAAAACA
TCCTTCATCGATGTCAATAGCATTGATTAG
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Synonyms
Publications