rna10212, rna10212 (mRNA) Nannochloropsis gaditana

Overview
Namerna10212
Unique Namerna10212
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length552
Alignment locationKK037266.1:14293..15316 -

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Properties
Property NameValue
Productelongation factor ts
Orig transcript idgnl|cribi|Naga_101055g1.7183.mrna
Orig protein idgnl|cribi|Naga_101055g1.7183
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:14293..15316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101055g1gene9915Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10212rna10212-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20492.1cds10181Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10212 ID=rna10212|Name=rna10212|organism=Nannochloropsis gaditana|type=mRNA|length=552bp
ATGCTGCCCAAGAGCGCCGGTCACTCGGTGATGAAAAGGGCAGGATATCC
AGCGAAAAGGATAGTCACGACACACGGAGAGAGGACCGCAGCTGGCGTTA
GCTTGGTCGTGCGAGCTTTGTTTGCTGTTTCACGACCAGAAACACGGAGT
AATGCCGGGGTGGTGGGTGCTTTTGACGGACGAAGACAGCACAGGCGACG
GAGTTTCCCTTCAGGGCAGGATTTATGTCCGTCTCTCCCGTCACATAGAA
TGCTGAGAAAGCGTGCTCGTGGCGGCGTTTCTTCCCAACTCGTTTGCGGT
CGCCCCGTGCTCGCATCTTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCTTCCTTTTCCTCTTCCTCAACCCCGCGAAATGCGG
CGGACGAAGCCAGACGGACGTTCTTTGCACAGTTGGGCTTTGGGAACGTG
GTGGCGGCACGATTGCAGGCAGAAAAAGAGGCGATAAAGGTGAGTGATGA
GGAGGGCGATATCGAGGAAGGGGGGGCAGATGGACGGCACGCATCTCCCT
GA
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protein sequence of rna10212

>rna10212-protein ID=rna10212-protein|Name=rna10212|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MRVTTSLLCAAVGLVLQQATAFLSPASFPSSKPASATVLRMAAEAVEVPM
DLIKKLRGMSGAPIMDCKKALAEEKLDVEAAFDWLRKKGQATIAKRDRAT
KEGLVALAVDGTRGVAVEVNSETDFVARNADFQGFVAGAAKTALGLTQGA
KPGVSDMEHAALIAVRGG
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mRNA from alignment at KK037266.1:14293..15316-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10212 ID=rna10212|Name=rna10212|organism=Nannochloropsis gaditana|type=mRNA|length=1024bp|location=Sequence derived from alignment at KK037266.1:14293..15316- (Nannochloropsis gaditana)
CCTAAAATGTACCAGGAGGGGTATTCTTTGTTGGGTATGCGTGAGCCAGG
AGCATGGACGCCTCACCCATGATGAAGTCTGCAGCCAGCTCATCAGCCTC
TGACACCCTTTTCCCGACGTGGCACCCGTGATACCCTCAGAGCGTTCGAA
CCAGTATGCGCGTAACTACAAGCCTTCTCTGTGCGGCCGTAGGCCTGGTC
TTGCAGCAGGCCACTGCGTTCCTCTCTCCTGCCTCCTTCCCGTCCTCCAA
GCCAGCATCAGCGACCGTCCTACGCATGGCGGCCGAGGCTGTGGAAGTTC
CCATGGACCTGATCAAAAAGCTTCGTGGCATGTCCGGCGCACCGATCATG
GATTGCAAGAAGGCTTTGGCGGAGGAGAAGCTTGGTAGGGTTGGAAGGAT
GGGAGGCAGGGCGGGGGAGAGGAGGGAGGTAGGTCGAGGGAGGATAGACT
CGATTGGAAGCGCGGAAAAGGGCCGAAATGCCGTCAACAAACATGGAGAC
AAACCTGTGCTCGTTACCACATCCTCATAATGACCACCTTACTCCCTCCC
CCCCCCCCCATTCATGATGACTGTAGACGTGGAGGCGGCCTTCGACTGGC
TGCGTAAGAAGGGACAGGCGACCATTGCCAAGCGGGATCGGGCGACCAAG
GAGGGTCTGGTGGCGCTGGCCGTGGACGGCACTCGCGGCGTGGCTGTGGA
GGTGCGTGATGGCAGTTTGCCTTGTCACCGTACTCCTTCATGTCCTTTTC
CCTCCCTCTCCCTTGTCTTTTCCTGCCCCGTACCCGCCCTCGTTCCTCGC
GTAACGCACCTTTTGATGGTTTTGGCCCGTCCACCCCGCACCCCCCCACC
CTCCTACGCGCCTTCCCTCCTTCAGGTAAACTCCGAGACGGATTTTGTGG
CCCGTAACGCCGATTTCCAAGGCTTCGTGGCAGGCGCCGCCAAGACAGCG
CTGGGACTGACGCAGGGGGCGAAGCCCGGGGTGTCTGACATGGAGCACGC
GGCATTGATCGCGGTAAGAGGAGG
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Coding sequence (CDS) from alignment at KK037266.1:14293..15316-

>rna10212 ID=rna10212|Name=rna10212|organism=Nannochloropsis gaditana|type=CDS|length=1509bp|location=Sequence derived from alignment at KK037266.1:14293..15316- (Nannochloropsis gaditana)
GTAAACTCCGAGACGGATTTTGTGGCCCGTAACGCCGATTTCCAAGGCTT
CGTGGCAGGCGCCGCCAAGACAGCGCTGGGACTGACGCAGGGGGCGAAGC
CCGGGGTGTCTGACATGGAGCACGCGGCATTGATCGCGGTAAGAGGAGGA
CGTGGAGGCGGCCTTCGACTGGCTGCGTAAGAAGGGACAGGCGACCATTG
CCAAGCGGGATCGGGCGACCAAGGAGGGTCTGGTGGCGCTGGCCGTGGAC
GGCACTCGCGGCGTGGCTGTGGAGATGCGCGTAACTACAAGCCTTCTCTG
TGCGGCCGTAGGCCTGGTCTTGCAGCAGGCCACTGCGTTCCTCTCTCCTG
CCTCCTTCCCGTCCTCCAAGCCAGCATCAGCGACCGTCCTACGCATGGCG
GCCGAGGCTGTGGAAGTTCCCATGGACCTGATCAAAAAGCTTCGTGGCAT
GTCCGGCGCACCGATCATGGATTGCAAGAAGGCTTTGGCGGAGGAGAAGC
TTGGTAAACTCCGAGACGGATTTTGTGGCCCGTAACGCCGATTTCCAAGG
CTTCGTGGCAGGCGCCGCCAAGACAGCGCTGGGACTGACGCAGGGGGCGA
AGCCCGGGGTGTCTGACATGGAGCACGCGGCATTGATCGCGGTAAGAGGA
GGACGTGGAGGCGGCCTTCGACTGGCTGCGTAAGAAGGGACAGGCGACCA
TTGCCAAGCGGGATCGGGCGACCAAGGAGGGTCTGGTGGCGCTGGCCGTG
GACGGCACTCGCGGCGTGGCTGTGGAGATGCGCGTAACTACAAGCCTTCT
CTGTGCGGCCGTAGGCCTGGTCTTGCAGCAGGCCACTGCGTTCCTCTCTC
CTGCCTCCTTCCCGTCCTCCAAGCCAGCATCAGCGACCGTCCTACGCATG
GCGGCCGAGGCTGTGGAAGTTCCCATGGACCTGATCAAAAAGCTTCGTGG
CATGTCCGGCGCACCGATCATGGATTGCAAGAAGGCTTTGGCGGAGGAGA
AGCTTGGTAAACTCCGAGACGGATTTTGTGGCCCGTAACGCCGATTTCCA
AGGCTTCGTGGCAGGCGCCGCCAAGACAGCGCTGGGACTGACGCAGGGGG
CGAAGCCCGGGGTGTCTGACATGGAGCACGCGGCATTGATCGCGGTAAGA
GGAGGACGTGGAGGCGGCCTTCGACTGGCTGCGTAAGAAGGGACAGGCGA
CCATTGCCAAGCGGGATCGGGCGACCAAGGAGGGTCTGGTGGCGCTGGCC
GTGGACGGCACTCGCGGCGTGGCTGTGGAGATGCGCGTAACTACAAGCCT
TCTCTGTGCGGCCGTAGGCCTGGTCTTGCAGCAGGCCACTGCGTTCCTCT
CTCCTGCCTCCTTCCCGTCCTCCAAGCCAGCATCAGCGACCGTCCTACGC
ATGGCGGCCGAGGCTGTGGAAGTTCCCATGGACCTGATCAAAAAGCTTCG
TGGCATGTCCGGCGCACCGATCATGGATTGCAAGAAGGCTTTGGCGGAGG
AGAAGCTTG
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Synonyms
Publications