|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100335g8.5837.mrna |
| Orig protein id | gnl|cribi|Naga_100335g8.5837 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037264.1 | supercontig | KK037264.1:71768..72446 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10183 ID=rna10183|Name=rna10183|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGAGGGCGTTATGCGTTGGGCTGATACGGCAGCCCGGTAATGTAGATGT
TATAATAGCAAGCGAGAAAGCATTTGACGCTCGAAGAAAAAAAAAGCGAA
GAAATTTACAGCAGCGACAGCACTGGGCCTGCTCGTGCTTTAACATCCCA
AATACGAGCGAAAAAAAAGAGGTTGACTTGGGGCGCTTGCGTGCGCTTCT
AACTCAGAACAAGGCTCTCGTTCATGCAAAAGGAAGAATGGATGAGGAGA
CACCTTTGCACATAGCAGCTGCAGAGGTAAGGATTCGGGTCCTCGAGGCC
GTTCGACTGCTCCTGCAAGCAGGGGCGTCGCCCGCGGCTGTCGACAAGGC
GGGCTACACGCCCTCGCACTGGGCCGCGGGGAAAGGACACGAAAAGGTGG
TTGAGGAGCTCTTGAAGCACAAAGCTGATGCCAACGCCGTGGACAAGAAC
GGACTCACACCTCTTCATTGGGCCGCCTACTGGGGTCAAACAGCGTGTAT
CAAGGAGCTGCTCTACAAGGGGGAGGCGGATCCGAACGCCCAGGACCACT
TACAGCACACGCCCTTCATGATGGCGGACTGA back to topprotein sequence of rna10183 >rna10183-protein ID=rna10183-protein|Name=rna10183|organism=Nannochloropsis gaditana|type=polypeptide|length=226bp
MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNI
NDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACK
IRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPV
VSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTE
QTDAGVRDWASIASSSDGTVRVEMQA back to topmRNA from alignment at KK037264.1:71768..72446+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10183 ID=rna10183|Name=rna10183|organism=Nannochloropsis gaditana|type=mRNA|length=679bp|location=Sequence derived from alignment at KK037264.1:71768..72446+ (Nannochloropsis gaditana)
ATGCGCAGTCCACTTTCTTTGCTTGCCCTTGGCATTACTCTCGGTAGTAC
CCTCGTCACGACCGCTGGTCAAGACCTCAATCTCAAGTCGATTCGCGCTG
TCGATAGATCCGTGACAAACAAGGACAcatggaaaatgaagggtAACATC
AATGATCCTTCTCTGACCTTTGTTCCGGCGATTGGCCAGACGGGACTGAC
CGTCGAATTGCAAGACGCCGCTACTGATCCCTTGAACACCGTAGCTTTTG
CAGCGAGCGATTGTCGTGTACCCGCgcatggaaggagggcagcctGCAAA
ATTAGAGGAGCTCGCGTGTCGATTAAAAGATCCAGACGTCCAAAGATTAA
AACGCCTAAGACTGTGCACGCGAAAAGCTACAACTCAACTGGTGGTTACT
ACAGTGTGACCGGAACTTTTCGAGGATTGACGTTCCTCGAGAACCCAGTG
GTGTCTCCTCTTACAGCCGCGCTAAGAGTGAACGGAAGTGTGCTGTCAGA
CACTCTAATCTCATGCTATGATCTTGCTCGAAAGAGTGCCAGGAGCACGA
TTAGTCAATGTGAGCCTGGGCCTCCTGTTCCTACGCcgacctggacggag
caaaccgACGCTGGTGTCCGTGACTGGGcgtcgatcgcgtcctcatCGGA
TGGCACGGTGCGTGTTGAGATGCAGGCAA back to topCoding sequence (CDS) from alignment at KK037264.1:71768..72446+ >rna10183 ID=rna10183|Name=rna10183|organism=Nannochloropsis gaditana|type=CDS|length=679bp|location=Sequence derived from alignment at KK037264.1:71768..72446+ (Nannochloropsis gaditana)
ATGCGCAGTCCACTTTCTTTGCTTGCCCTTGGCATTACTCTCGGTAGTAC
CCTCGTCACGACCGCTGGTCAAGACCTCAATCTCAAGTCGATTCGCGCTG
TCGATAGATCCGTGACAAACAAGGACAcatggaaaatgaagggtAACATC
AATGATCCTTCTCTGACCTTTGTTCCGGCGATTGGCCAGACGGGACTGAC
CGTCGAATTGCAAGACGCCGCTACTGATCCCTTGAACACCGTAGCTTTTG
CAGCGAGCGATTGTCGTGTACCCGCgcatggaaggagggcagcctGCAAA
ATTAGAGGAGCTCGCGTGTCGATTAAAAGATCCAGACGTCCAAAGATTAA
AACGCCTAAGACTGTGCACGCGAAAAGCTACAACTCAACTGGTGGTTACT
ACAGTGTGACCGGAACTTTTCGAGGATTGACGTTCCTCGAGAACCCAGTG
GTGTCTCCTCTTACAGCCGCGCTAAGAGTGAACGGAAGTGTGCTGTCAGA
CACTCTAATCTCATGCTATGATCTTGCTCGAAAGAGTGCCAGGAGCACGA
TTAGTCAATGTGAGCCTGGGCCTCCTGTTCCTACGCcgacctggacggag
caaaccgACGCTGGTGTCCGTGACTGGGcgtcgatcgcgtcctcatCGGA
TGGCACGGTGCGTGTTGAGATGCAGGCAA back to top
|