EWM20521.1, cds10152 (CDS) Nannochloropsis gaditana

Overview
NameEWM20521.1
Unique Namecds10152
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:71768..72446 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20521.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100335g8.5837.mrna
GbkeyCDS
End range.
End range72446
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:71768..72446 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585100200|gb|EWM20521.1| (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 460.299 bits (1183), Expect = 7.586e-164
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGTVRVEMQA 226
            MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGTVRVEMQA
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGTVRVEMQA 226          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585108538|gb|EWM26485.1| (Neuraminidase, partial [Nannochloropsis gaditana])

HSP 1 Score: 407.527 bits (1046), Expect = 1.223e-142
Identity = 199/219 (90.87%), Postives = 204/219 (93.15%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGT 219
            MRS LSLL LG+T GSTLV TAGQDLNLKSIR VDRSVTNKDTWKMKGNINDPSLT VPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRA CKIRGARVSIK SRRPK+KTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALR+NGSVLSDTL SCYDLARKS R+TIS CEPGPP PTPTWTEQT AG R W+SIASSSDGT
Sbjct:    1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGSVLSDTLTSCYDLARKSGRNTISHCEPGPPAPTPTWTEQTTAGARRWSSIASSSDGT 219          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585108537|gb|EWM26484.1| (Neuraminidase, partial [Nannochloropsis gaditana])

HSP 1 Score: 408.297 bits (1048), Expect = 2.294e-142
Identity = 199/219 (90.87%), Postives = 204/219 (93.15%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGT 219
            MRS LSLL LG+T GSTLV TAGQDLNLKSIR VDRSVTNKDTWKMKGNINDPSLT VPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRA CKIRGARVSIK SRRPK+KTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALR+NGSVLSDTL SCYDLARKS R+TIS CEPGPP PTPTWTEQT AG R W+SIASSSDGT
Sbjct:    1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGSVLSDTLTSCYDLARKSGRNTISHCEPGPPAPTPTWTEQTTAGARRWSSIASSSDGT 219          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585109630|gb|EWM27399.1| (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 406.371 bits (1043), Expect = 4.426e-142
Identity = 204/226 (90.27%), Postives = 209/226 (92.48%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGTVRVEMQA 226
            MRS LSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKG+INDPSLT V AIGQ GLTVELQDAATDPLNTV FAASDCRVPAHGRRAACKIRGARVSIK SRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAAL V+ SVLSDTL  CY+L RK+ R+TIS CEPGPPVPTPTWTEQT AG RDW SIASSSDGTVRV MQA
Sbjct:    1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVDESVLSDTLTLCYNLPRKNGRNTISHCEPGPPVPTPTWTEQTAAGSRDWNSIASSSDGTVRVWMQA 226          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585109627|gb|EWM27397.1| (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana])

HSP 1 Score: 373.629 bits (958), Expect = 2.982e-127
Identity = 186/219 (84.93%), Postives = 192/219 (87.67%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGT 219
            MRS LSLLALGITLGSTLVTT GQ LNLKSIRAVDRSVTNKDTWKMKG+INDPSLT VP IGQ GLTVELQDA TD LNTV FAA DCRVPAHG+RAACKIRGARV IK SRRPKI TPKTVHAK YNSTGGYYSVTGTFR LTFLENPVVSPLTAAL VN SVLSDTL SCYDL RK+ R+ I+ CEPGPPVPTP WTEQ  AG R+W SIASSSDGT
Sbjct:   69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNSTGGYYSVTGTFRRLTFLENPVVSPLTAALTVNESVLSDTLTSCYDLPRKNGRNPITHCEPGPPVPTPIWTEQIAAGSREWFSIASSSDGT 287          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|553186634|ref|XP_005854458.1| (glycosyl hydrolase [Nannochloropsis gaditana CCMP526] >gi|422294604|gb|EKU21904.1| glycosyl hydrolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 328.176 bits (840), Expect = 2.049e-108
Identity = 158/174 (90.80%), Postives = 162/174 (93.10%), Query Frame = 0
Query:   46 MKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQTDAGVRDWASIASSSDGT 219
            MKG+I+DPSLT V AI QTGLTVELQDAATDPLNTV FAASDCRVPAHGRRAACKIRGARVSIK SRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPL AALRVNGSVLSDTL SCYDLARKS R+TI+ CEPGP VPTPTWTEQT AGVRDW SIASSSDGT
Sbjct:    1 MKGSISDPSLTIVSAIRQTGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLAAALRVNGSVLSDTLTSCYDLARKSGRNTITHCEPGPLVPTPTWTEQTAAGVRDWNSIASSSDGT 174          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585100656|gb|EWM20775.1| (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana])

HSP 1 Score: 302.368 bits (773), Expect = 7.238e-102
Identity = 150/191 (78.53%), Postives = 163/191 (85.34%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGP 191
            MRS  S LA+GIT GS+LVTTAGQDLNLKSIRAVDRSV NKDTWKMKG I+DPS+T VP I QTGL VELQD  +DPLNTV FAASDCRVP +GRRA CKIRGARVSIK SRRPK+KTPKTVHAK+YNSTGGYY VTG  RGLTFLE+ V+SPLTA L VNG VLSDTL SCYDL R + R+TI+ CEPGP
Sbjct:    1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRRPKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNGDVLSDTLTSCYDLPRMNGRNTITHCEPGP 191          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585112674|gb|EWM30045.1| (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 182.956 bits (463), Expect = 9.397e-55
Identity = 98/199 (49.25%), Postives = 131/199 (65.83%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGP-PV-PTPT 197
            MR  LSLLALG+TL    V TAGQ+  LK+++  +RS T +D W MKGN+++P++  VPAIGQ GLTV L D + DPL + AFAA++C++  +GR   CK  GARVSIKR+RRPK      V + + NSTGGYY  +G FR L FL++PVV+PLT  + V  + L   + +C +  + + R T   C PGP PV P PT
Sbjct:    1 MRRILSLLALGVTL----VMTAGQEFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRRPK---GAKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTPAPT 192          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|585099510|gb|EWM20135.1| (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 182.185 bits (461), Expect = 1.478e-54
Identity = 98/202 (48.51%), Postives = 129/202 (63.86%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPTWTEQT 202
            MR  LSLLALGITL    V TAGQ+  LK+I+   R  T +D W MKGN+++P++  VP IGQ+GLTV L DA+  PL + AFAA++C++  + R  +CK  GARV IKR+RRPK      V + SYNSTGGYY+ +G FR L FL++ VV+PLT  L V  + L   + +C +  + + R T   C      PT TWTEQT
Sbjct:    1 MRCILSLLALGITL----VMTAGQEFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRRPK---AAKVKSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTTTLPAIVSTCSERTKSAGRITKITC-----TPTRTWTEQT 190          
BLAST of EWM20521.1 vs. NCBI_GenBank
Match: gi|553189589|ref|XP_005855033.1| (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >gi|422294031|gb|EKU21331.1| hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 179.874 bits (455), Expect = 1.171e-53
Identity = 93/161 (57.76%), Postives = 113/161 (70.19%), Query Frame = 0
Query:    1 MRSPLSLLALGITLGSTLVTTAGQDL-NLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRV 160
            MR    LLALGITL    V TAGQDL  LK+++ +D+S T +D W MKGN++DP++T VP IGQ GLTVELQD A   L + AFAASDC++  +GR  +CK RGARVSIK SRRPK      V   +YNSTGGYYS +G FR L FL++P+V PLT  L V
Sbjct:    1 MRRAFFLLALGITL----VMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPK---GANVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNV 154          
The following BLAST results are available for this feature:
BLAST of EWM20521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100200|gb|EWM20521.1|7.586e-164100.00hypothetical protein Naga_100335g8, partial [Nanno... [more]
gi|585108538|gb|EWM26485.1|1.223e-14290.87Neuraminidase, partial [Nannochloropsis gaditana][more]
gi|585108537|gb|EWM26484.1|2.294e-14290.87Neuraminidase, partial [Nannochloropsis gaditana][more]
gi|585109630|gb|EWM27399.1|4.426e-14290.27hypothetical protein Naga_100212g1, partial [Nanno... [more]
gi|585109627|gb|EWM27397.1|2.982e-12784.93hypothetical protein Naga_101181g1 [Nannochloropsi... [more]
gi|553186634|ref|XP_005854458.1|2.049e-10890.80glycosyl hydrolase [Nannochloropsis gaditana CCMP5... [more]
gi|585100656|gb|EWM20775.1|7.238e-10278.53hypothetical protein Naga_100549g2 [Nannochloropsi... [more]
gi|585112674|gb|EWM30045.1|9.397e-5549.25hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
gi|585099510|gb|EWM20135.1|1.478e-5448.51hypothetical protein Naga_101626g1, partial [Nanno... [more]
gi|553189589|ref|XP_005855033.1|1.171e-5357.76hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10183rna10183Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications