EWM20548.1, cds10125 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|585100245|gb|EWM20548.1| (surfeit locus protein 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 392.889 bits (1008), Expect = 2.946e-138 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MTRRGARAVQLAASQLDFSSVFLSRFASHGRRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRGDVGGHHRSCGGKLPEGSYRGEEG 194 MTRRGARAVQLAASQLDFSSVFLSRFASHGRRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRGDVGGHHRSCGGKLPEGSYRGEEG Sbjct: 1 MTRRGARAVQLAASQLDFSSVFLSRFASHGRRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRGDVGGHHRSCGGKLPEGSYRGEEG 194
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|553190524|ref|XP_005855208.1| (surfeit locus 1, partial [Nannochloropsis gaditana CCMP526] >gi|422293854|gb|EKU21154.1| surfeit locus 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 316.235 bits (809), Expect = 2.324e-108 Identity = 160/165 (96.97%), Postives = 160/165 (96.97%), Query Frame = 0 Query: 1 MTRRGARAVQLAASQLDFSSVFLSRFASHGRRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYV 165 MTRRGARAVQLAASQLD SSVF SRFASH RRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQ EPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPF RAGDGYV Sbjct: 1 MTRRGARAVQLAASQLDSSSVFSSRFASHVRRRVSSSTRLPPAGVSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQLEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPF-RAGDGYV 164
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|219114451|ref|XP_002176396.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402642|gb|EEC42632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.0258 bits (188), Expect = 2.534e-13 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 0 Query: 49 TGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQP----EPLPDFPE-------AYRRYLVSGTFLHGLELSVGPRAAPP-----SVHGPAQGLGTNPQGFYILTPF 157 T +KG ST AG + FG L GT LGVWQ++RYF K + +R LA++P E L + + ++R+ + GTF H E+ VGPR PP AQG+ ++PQG+++LTP Sbjct: 6 TAANKGIST--AGKVFFGSLCAGTFGLGVWQTQRYFIKQTLVAQRQAELAQEPVTDLEVLSSYAQPGNGTETSFRKVRLRGTFRHDQEILVGPRGPPPGALPDKAGSSAQGMSSSPQGYFVLTPL 128
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|1210518104|dbj|GAX23035.1| (surfeit locus 1 family protein [Fistulifera solaris]) HSP 1 Score: 75.8702 bits (185), Expect = 1.048e-12 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 45 VSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEA------YRRYLVSGTFLHGLELSVGPRAAPP-SVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRGDV 173 +SSS G SK AG + FGGL VGT LG WQ++RYF KI ++ER L K P + E + + + G + H E VGPR PP ++ A G+ + PQG++++TPF G + RG V Sbjct: 351 MSSSKGLSK------AGQVFFGGLCVGTFGLGTWQTQRYFEKIRLMEERQNDLQKAPTTTFNLQEIQQQTNNFCQLQLQGRYDHRHEFLVGPRGPPPGALPDTAGGISSAPQGYFVMTPFILKKSGETVIVNRGWV 480
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|1210517654|dbj|GAX23350.1| (surfeit locus 1 family protein [Fistulifera solaris]) HSP 1 Score: 72.4034 bits (176), Expect = 5.924e-12 Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0 Query: 45 VSSSTGNSKGKSTDLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEA------YRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQ---GLGTNPQGFYILTPFQRAGDGYVQALTRGDV 173 +SSS G SK AG + FGGL VGT LG WQ++RYF KI ++ER L K P + E + + + G + H E VGPR PP G+ + PQG++++TPF G + RG V Sbjct: 1 MSSSKGLSK------AGQVFFGGLCVGTFGLGTWQTQRYFEKIRLMEERQSDLQKAPTETFNIQEIQQQTNNFCQLQLQGRYDHRHEFLVGPRGPPPGALPDTAGGGGISSAPQGYFVMTPFILKKTGETVLVNRGWV 132
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|1005951053|ref|XP_015783870.1| (PREDICTED: surfeit locus protein 1-like [Tetranychus urticae]) HSP 1 Score: 71.633 bits (174), Expect = 1.115e-11 Identity = 44/119 (36.97%), Postives = 59/119 (49.58%), Query Frame = 0 Query: 59 LAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPD-----FPEAYRRYLVSGTFLHGLELSVGPRAAP-PSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG 171 LA LF + + T CLG WQ +RY WK + E + L+K+P PLP+ Y+R L+ G F H E +GPR S A L N G+Y++TPF A Y + RG Sbjct: 41 LADYFLFS-IPLTTFCLGTWQVKRYKWKQELKAELKDQLSKEPVPLPEDLRKVDDMVYQRVLLRGHFDHSKEQFIGPRVLQRESAVAAASMLSGNANGYYVVTPFVLADRNYSVLINRG 158
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|570318380|gb|ETO66328.1| (hypothetical protein F444_16460 [Phytophthora parasitica P1976]) HSP 1 Score: 71.2478 bits (173), Expect = 2.557e-11 Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 34 VSSSTRLPPAGVS-SSTGNSKGKSTDL---AGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEA--------YRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG 171 +S+STR A S + TG S G ++ AG+ FG + T LG WQ++RY+WK+D I ER + L++ LP A YR+ + G F G + PR+AP P+ + G YI + QR DG + RG Sbjct: 13 LSASTRRFAASASQAKTGGSSGNESNFSRYAGMAFFGAVTATTAYLGTWQTQRYYWKVDLINERTKELSESVAELPKDATASDDIDDIEYRQLRLEGNFKVGSTFYLYPRSAPAD---PSDSVARVKSGGYIYSLLQRE-DGTPVIVNRG 158
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|675205577|ref|XP_008911673.1| (hypothetical protein PPTG_16103 [Phytophthora parasitica INRA-310] >gi|568088267|gb|ETN03129.1| hypothetical protein PPTG_16103 [Phytophthora parasitica INRA-310]) HSP 1 Score: 70.8626 bits (172), Expect = 2.661e-11 Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 34 VSSSTRLPPAGVS-SSTGNSKGKSTDL---AGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEA--------YRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG 171 +S+STR A S + TG S G ++ AG+ FG + T LG WQ++RY+WK+D I ER + L++ LP A YR+ + G F G + PR+AP P+ + G YI + QR DG + RG Sbjct: 13 LSASTRRFAASASQAKTGGSSGNESNFSRYAGMAFFGAVTATTAYLGTWQTQRYYWKVDLINERTKELSESVAELPKDATASDDIDDIEYRQLRLEGNFKVGSTFYLYPRSAPAD---PSDSVARVKSGGYIYSLLQRE-DGTPVIVNRG 158
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|1020441138|gb|KZL76507.1| (SURF1 family protein [Colletotrichum tofieldiae]) HSP 1 Score: 69.707 bits (169), Expect = 8.640e-11 Identity = 62/211 (29.38%), Postives = 85/211 (40.28%), Query Frame = 0 Query: 1 MTRRGARAVQLAASQLDFSSVFLSRFASHGRRRVSSSTRLPPAGVSSSTGNSKGKSTDLA--------GLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDF--PEA-----YRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG----DVGGHHRSCGGKLPEGSYRGE 192 +TR GA A S D S + +F + R R S PP S N DL GL++ + + LG WQ +R WK D I + + L + P PLP PEA YRR +G F H E+ +GPR + QG+ ++TP +R GDG + RG D+ + LP G E Sbjct: 30 LTRPGATA---TPSSCDTS---IRKFHTTPRARASE----PPPDFISVVDNPP----DLVRAGRRHGPGLIILALIPITAFALGTWQVQRLGWKTDLIAKFEDRLVRDPLPLPPKIDPEAVAEFDYRRVYATGRFRHDKEMLIGPR------------MWDGEQGYMVVTPLEREGDGTTVLVNRGWISKDMADQRKRPASALPRGEVTVE 214
BLAST of EWM20548.1 vs. NCBI_GenBank
Match: gi|1069515688|ref|XP_018154343.1| (SURF1 family protein [Colletotrichum higginsianum IMI 349063] >gi|1039267552|gb|OBR05825.1| SURF1 family protein [Colletotrichum higginsianum IMI 349063]) HSP 1 Score: 69.707 bits (169), Expect = 1.082e-10 Identity = 43/145 (29.66%), Postives = 62/145 (42.76%), Query Frame = 0 Query: 61 GLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLP---------DFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG----DVGGHHRSCGGKLPEGSYRGE 192 GL++ + + LG WQ +R WK D I + + L + P PLP DF YRR +G F H E+ +GPR + QG+ ++TP +R GDG + RG D+ + LP G E Sbjct: 91 GLIILALIPITAFVLGTWQVQRLGWKTDLIAKLEDRLVRDPLPLPPRIDPAAVADF--DYRRVYATGRFRHDKEMLIGPR------------MWDGEQGYMVVTPLEREGDGTTVLVNRGWIGKDMADQRKRPASALPRGEVTVE 221 The following BLAST results are available for this feature:
BLAST of EWM20548.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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