EWM20553.1, cds10120 (CDS) Nannochloropsis gaditana

Overview
NameEWM20553.1
Unique Namecds10120
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:864..925 -
Alignment locationKK037264.1:526..820 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20553.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102290g2.4993.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:864..925 -
KK037264.1supercontigKK037264.1:526..820 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20553.1 vs. NCBI_GenBank
Match: gi|585100256|gb|EWM20553.1| (hypothetical protein Naga_102290g2 [Nannochloropsis gaditana])

HSP 1 Score: 249.21 bits (635), Expect = 6.489e-84
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:    1 MYLASSTIGKKEQDCISPFLVLEIFASCNPHGRYNDGWSMRGYFRAFRFKFLKKKNHGTSLVITVDMYIQNDLYRSCLCINVCVRAWDPIRRPAPPVPPARAMKVKATKKDERVRLEE 118
            MYLASSTIGKKEQDCISPFLVLEIFASCNPHGRYNDGWSMRGYFRAFRFKFLKKKNHGTSLVITVDMYIQNDLYRSCLCINVCVRAWDPIRRPAPPVPPARAMKVKATKKDERVRLEE
Sbjct:    1 MYLASSTIGKKEQDCISPFLVLEIFASCNPHGRYNDGWSMRGYFRAFRFKFLKKKNHGTSLVITVDMYIQNDLYRSCLCINVCVRAWDPIRRPAPPVPPARAMKVKATKKDERVRLEE 118
The following BLAST results are available for this feature:
BLAST of EWM20553.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100256|gb|EWM20553.1|6.489e-84100.00hypothetical protein Naga_102290g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10151rna10151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications