rna10150, rna10150 (mRNA) Nannochloropsis gaditana

Overview
Namerna10150
Unique Namerna10150
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length261
Alignment locationKK037264.1:41..354 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102290g1.4994.mrna
Orig protein idgnl|cribi|Naga_102290g1.4994
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:41..354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102290g1gene9853Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10150rna10150-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20554.1cds10119Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10150 ID=rna10150|Name=rna10150|organism=Nannochloropsis gaditana|type=mRNA|length=261bp
ATGCGTTTGATTTTTGCGACATTGGCTTTGCCTGCGCTCCTCCTTGCCGA
CCGAACACCCGGAGCCCAAGCAACCCCTGGAGGAGGTGTATTGTGGTCCT
CTCTAAATACCACAGCGGTTAAAGCAGGCGAAGAAGCAGTTACCATCTTC
ACAGGCGGCCCCAGCCTTAACGCTAACCAGAGCGCCGCGTTTGTCGGGAG
CACGGCGGGTCTCATTGGCTTCGATCTCACGAATGGAAAATCCGGCCGTT
GGTCGAGGTAG
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protein sequence of rna10150

>rna10150-protein ID=rna10150-protein|Name=rna10150|organism=Nannochloropsis gaditana|type=polypeptide|length=82bp
MHCVHGLGGKWGRSSPKRGRRRPGAFIPSRSMMSSRRTRHPSKKEMARSR
RAAASLLKLKVSSRGSLMEWEGSDGGEVTSPR
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mRNA from alignment at KK037264.1:41..354+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10150 ID=rna10150|Name=rna10150|organism=Nannochloropsis gaditana|type=mRNA|length=314bp|location=Sequence derived from alignment at KK037264.1:41..354+ (Nannochloropsis gaditana)
ATGCACTGCGTCCACGGATGTAAATAGCTTTCCCATGGGCCCTGATAAgc
taccttcccttcccccattcctcccccaaaaaagtgggggggaaatgggg
aAGGAGTTCACCAAAACGGGGGCGTAGGAGGCCTGGTGCTTTTATTCCCT
CAAGGTCGATGATGTCGTCACGTCGGACAAGACATCCGTCGAAGAAAGAA
ATGGCGCGTAGCCGCCGGGCAGCTGCCTCTCTCTTGAAGCTTAAGGTCTC
TTCACGCGGTAGCTtgatggaatgggaggggagtgaTGGAGGTGAGGTGA
CATCTCCTcgatag
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Coding sequence (CDS) from alignment at KK037264.1:41..354+

>rna10150 ID=rna10150|Name=rna10150|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at KK037264.1:41..354+ (Nannochloropsis gaditana)
ATGCACTGCGTCCACGGATtgggggggaaatggggaAGGAGTTCACCAAA
ACGGGGGCGTAGGAGGCCTGGTGCTTTTATTCCCTCAAGGTCGATGATGT
CGTCACGTCGGACAAGACATCCGTCGAAGAAAGAAATGGCGCGTAGCCGC
CGGGCAGCTGCCTCTCTCTTGAAGCTTAAGGTCTCTTCACGCGGTAGCTt
gatggaatgggaggggagtgaTGGAGGTGAGGTGACATCTCCTcgatagA
TGCACTGCGTCCACGGATtgggggggaaatggggaAGGAGTTCACCAAAA
CGGGGGCGTAGGAGGCCTGGTGCTTTTATTCCCTCAAGGTCGATGATGTC
GTCACGTCGGACAAGACATCCGTCGAAGAAAGAAATGGCGCGTAGCCGCC
GGGCAGCTGCCTCTCTCTTGAAGCTTAAGGTCTCTTCACGCGGTAGCTtg
atggaatgggaggggagtgaTGGAGGTGAGGTGACATCTCCTcgatag
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Synonyms
Publications