EWM20554.1, cds10119 (CDS) Nannochloropsis gaditana

Overview
NameEWM20554.1
Unique Namecds10119
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:41..59 +
Alignment locationKK037264.1:125..354 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20554.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102290g1.4994.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:41..59 +
KK037264.1supercontigKK037264.1:125..354 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20554.1 vs. NCBI_GenBank
Match: gi|585100257|gb|EWM20554.1| (hypothetical protein Naga_102290g1 [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 1.904e-49
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:    1 MHCVHGLGGKWGRSSPKRGRRRPGAFIPSRSMMSSRRTRHPSKKEMARSRRAAASLLKLKVSSRGSLMEWEGSDGGEVTSPR 82
            MHCVHGLGGKWGRSSPKRGRRRPGAFIPSRSMMSSRRTRHPSKKEMARSRRAAASLLKLKVSSRGSLMEWEGSDGGEVTSPR
Sbjct:    1 MHCVHGLGGKWGRSSPKRGRRRPGAFIPSRSMMSSRRTRHPSKKEMARSRRAAASLLKLKVSSRGSLMEWEGSDGGEVTSPR 82
The following BLAST results are available for this feature:
BLAST of EWM20554.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100257|gb|EWM20554.1|1.904e-49100.00hypothetical protein Naga_102290g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10150rna10150Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications