EWM20558.1, cds10114 (CDS) Nannochloropsis gaditana

Overview
NameEWM20558.1
Unique Namecds10114
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:56889..57119 +
Alignment locationKK037263.1:57418..57503 +
Alignment locationKK037263.1:57874..58013 +
Alignment locationKK037263.1:58279..58433 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20558.1
Product2-oxoglutarate-fe -dependent oxygenase domain-containing protein
Orig transcript idgnl|cribi|Naga_100728g2.1133.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:56889..57119 +
KK037263.1supercontigKK037263.1:57418..57503 +
KK037263.1supercontigKK037263.1:57874..58013 +
KK037263.1supercontigKK037263.1:58279..58433 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR027443IPNS-like
Homology
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|585100265|gb|EWM20558.1| (2-oxoglutarate-fe -dependent oxygenase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 416.387 bits (1069), Expect = 2.802e-147
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH 203
            MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH
Sbjct:    1 MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH 203          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1149592336|gb|OON01604.1| (hypothetical protein BSLG_07749 [Batrachochytrium salamandrivorans])

HSP 1 Score: 138.658 bits (348), Expect = 2.419e-36
Identity = 64/122 (52.46%), Postives = 82/122 (67.21%), Query Frame = 0
Query:   57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176
            +H+DYGCLT+LN DE+T ALQ +   G WI ADPIPG  ++NIGDM++ W+NG + ST HRV+      RIS+PFFFEPN + +V PL EC       GK  +Y  V++ DHL  KVT NF 
Sbjct:  204 EHTDYGCLTILNTDETTGALQVKAKSGEWISADPIPGAFVINIGDMVNIWTNGVYTSTLHRVIHTKSSYRISVPFFFEPNFNAVVSPLAEC---IAMSGKPALYQPVMYGDHLLGKVTGNFD 322          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|857974906|emb|CEO99068.1| (hypothetical protein PBRA_007182 [Plasmodiophora brassicae])

HSP 1 Score: 135.961 bits (341), Expect = 4.593e-35
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 0
Query:   57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSF 177
            +H+DYGCLT +N DE T ALQ +N QG W+ ADP+PG  +VN+GDML+ W+NG +KSTPHRV    G  R+S+PFFFEPN D  + PL   E +    G     V F +HL  +V +NF +
Sbjct:  223 EHTDYGCLTFVNCDEVTGALQVKNRQGVWVAADPVPGAFIVNVGDMLNHWTNGAYKSTPHRVNNVGGCGRVSVPFFFEPNYDARIKPL---EAFGAKDG---FEVTFGEHLSKRVLSNFRY 337          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|548858982|gb|ERN16696.1| (hypothetical protein AMTR_s00051p00212980 [Amborella trichopoda])

HSP 1 Score: 133.265 bits (334), Expect = 4.938e-35
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176
            H+DYG LTL+N D+   ALQ RN  G WI+A PIPGT + NIGDML  WSNG ++ T HRV+    + RISIPFFFEPN D +V PL  C+       K +  V++ DHL  KV NNF+
Sbjct:  130 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 247          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|575486298|ref|XP_006682443.1| (hypothetical protein BATDEDRAFT_36127 [Batrachochytrium dendrobatidis JAM81] >gi|328766881|gb|EGF76933.1| hypothetical protein BATDEDRAFT_36127 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 134.42 bits (337), Expect = 9.690e-35
Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176
            +H+DYGCLT+LN DE+T ALQ ++  G WI ADPIPG  ++NIGDM++ W+N  + ST HRV+      RIS+PFFFEPN D ++ PL EC    +  GK  ++  +L+ DHL  KV +NF 
Sbjct:  204 EHTDYGCLTILNTDETTGALQVKSKSGEWINADPIPGAFVINIGDMVNVWTNELYTSTLHRVIHTKDSFRISVPFFFEPNFDAIIAPLPEC---VKMSGKPALFQPLLYGDHLLGKVNSNFD 322          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1173111609|ref|XP_020529662.1| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X3 [Amborella trichopoda])

HSP 1 Score: 133.265 bits (334), Expect = 1.859e-34
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176
            H+DYG LTL+N D+   ALQ RN  G WI+A PIPGT + NIGDML  WSNG ++ T HRV+    + RISIPFFFEPN D +V PL  C+       K +  V++ DHL  KV NNF+
Sbjct:  188 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 305          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1028576761|gb|OAJ45065.1| (hypothetical protein BDEG_28232 [Batrachochytrium dendrobatidis JEL423])

HSP 1 Score: 134.035 bits (336), Expect = 1.960e-34
Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176
            +H+DYGCLT+LN DE+T ALQ ++  G WI ADPIPG  ++NIGDM++ W+N  + ST HRV+      RIS+PFFFEPN D ++ PL EC    +  GK  ++  +L+ DHL  KV +NF 
Sbjct:  228 EHTDYGCLTILNTDETTGALQVKSKSGEWINADPIPGAFVINIGDMVNVWTNELYTSTLHRVIHTKDSFRISVPFFFEPNFDAIIAPLPEC---VKMSGKPALFQPLLYGDHLLGKVNSNFD 346          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|769799073|ref|XP_006855229.2| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X2 [Amborella trichopoda])

HSP 1 Score: 133.265 bits (334), Expect = 3.212e-34
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176
            H+DYG LTL+N D+   ALQ RN  G WI+A PIPGT + NIGDML  WSNG ++ T HRV+    + RISIPFFFEPN D +V PL  C+       K +  V++ DHL  KV NNF+
Sbjct:  212 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 329          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1173111606|ref|XP_020529661.1| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Amborella trichopoda])

HSP 1 Score: 133.65 bits (335), Expect = 5.770e-34
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176
            H+DYG LTL+N D+   ALQ RN  G WI+A PIPGT + NIGDML  WSNG ++ T HRV+    + RISIPFFFEPN D +V PL  C+       K +  V++ DHL  KV NNF+
Sbjct:  255 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 372          
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1148901035|ref|XP_020132862.1| (putative 2-oxoglutarate-dependent dioxygenase [Diplodia corticola] >gi|1103750138|gb|OJD36602.1| putative 2-oxoglutarate-dependent dioxygenase [Diplodia corticola])

HSP 1 Score: 132.88 bits (333), Expect = 6.858e-34
Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKI-YSSVLFADHLRSKVTNNF 175
            +H+DYGC+TLL  D++  ALQ +   G+WI ADPIPG  +VNIGDM+ RW+NG +KST HRV+      R+S+PFFFEP+ D  + PL +C   A   GK+ Y  V++ +HL  K+  NF
Sbjct:  247 EHTDYGCVTLLLADDTPNALQVQRKDGSWISADPIPGAFVVNIGDMMERWTNGLWKSTNHRVIHRGANYRVSVPFFFEPDFDARIAPLAKC--VAETGGKVQYDEVVYGEHLLGKIKGNF 364          
The following BLAST results are available for this feature:
BLAST of EWM20558.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100265|gb|EWM20558.1|2.802e-147100.002-oxoglutarate-fe -dependent oxygenase domain-cont... [more]
gi|1149592336|gb|OON01604.1|2.419e-3652.46hypothetical protein BSLG_07749 [Batrachochytrium ... [more]
gi|857974906|emb|CEO99068.1|4.593e-3550.41hypothetical protein PBRA_007182 [Plasmodiophora b... [more]
gi|548858982|gb|ERN16696.1|4.938e-3552.94hypothetical protein AMTR_s00051p00212980 [Amborel... [more]
gi|575486298|ref|XP_006682443.1|9.690e-3550.00hypothetical protein BATDEDRAFT_36127 [Batrachochy... [more]
gi|1173111609|ref|XP_020529662.1|1.859e-3452.94probable 2-oxoglutarate-dependent dioxygenase At3g... [more]
gi|1028576761|gb|OAJ45065.1|1.960e-3450.00hypothetical protein BDEG_28232 [Batrachochytrium ... [more]
gi|769799073|ref|XP_006855229.2|3.212e-3452.94probable 2-oxoglutarate-dependent dioxygenase At3g... [more]
gi|1173111606|ref|XP_020529661.1|5.770e-3452.94probable 2-oxoglutarate-dependent dioxygenase At3g... [more]
gi|1148901035|ref|XP_020132862.1|6.858e-3449.17putative 2-oxoglutarate-dependent dioxygenase [Dip... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10145rna10145Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications