EWM20558.1, cds10114 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|585100265|gb|EWM20558.1| (2-oxoglutarate-fe -dependent oxygenase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 416.387 bits (1069), Expect = 2.802e-147 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 Query: 1 MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH 203 MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH Sbjct: 1 MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPFLHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGSERH 203
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1149592336|gb|OON01604.1| (hypothetical protein BSLG_07749 [Batrachochytrium salamandrivorans]) HSP 1 Score: 138.658 bits (348), Expect = 2.419e-36 Identity = 64/122 (52.46%), Postives = 82/122 (67.21%), Query Frame = 0 Query: 57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176 +H+DYGCLT+LN DE+T ALQ + G WI ADPIPG ++NIGDM++ W+NG + ST HRV+ RIS+PFFFEPN + +V PL EC GK +Y V++ DHL KVT NF Sbjct: 204 EHTDYGCLTILNTDETTGALQVKAKSGEWISADPIPGAFVINIGDMVNIWTNGVYTSTLHRVIHTKSSYRISVPFFFEPNFNAVVSPLAEC---IAMSGKPALYQPVMYGDHLLGKVTGNFD 322
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|857974906|emb|CEO99068.1| (hypothetical protein PBRA_007182 [Plasmodiophora brassicae]) HSP 1 Score: 135.961 bits (341), Expect = 4.593e-35 Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 0 Query: 57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFSF 177 +H+DYGCLT +N DE T ALQ +N QG W+ ADP+PG +VN+GDML+ W+NG +KSTPHRV G R+S+PFFFEPN D + PL E + G V F +HL +V +NF + Sbjct: 223 EHTDYGCLTFVNCDEVTGALQVKNRQGVWVAADPVPGAFIVNVGDMLNHWTNGAYKSTPHRVNNVGGCGRVSVPFFFEPNYDARIKPL---EAFGAKDG---FEVTFGEHLSKRVLSNFRY 337
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|548858982|gb|ERN16696.1| (hypothetical protein AMTR_s00051p00212980 [Amborella trichopoda]) HSP 1 Score: 133.265 bits (334), Expect = 4.938e-35 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176 H+DYG LTL+N D+ ALQ RN G WI+A PIPGT + NIGDML WSNG ++ T HRV+ + RISIPFFFEPN D +V PL C+ K + V++ DHL KV NNF+ Sbjct: 130 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 247
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|575486298|ref|XP_006682443.1| (hypothetical protein BATDEDRAFT_36127 [Batrachochytrium dendrobatidis JAM81] >gi|328766881|gb|EGF76933.1| hypothetical protein BATDEDRAFT_36127 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 134.42 bits (337), Expect = 9.690e-35 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176 +H+DYGCLT+LN DE+T ALQ ++ G WI ADPIPG ++NIGDM++ W+N + ST HRV+ RIS+PFFFEPN D ++ PL EC + GK ++ +L+ DHL KV +NF Sbjct: 204 EHTDYGCLTILNTDETTGALQVKSKSGEWINADPIPGAFVINIGDMVNVWTNELYTSTLHRVIHTKDSFRISVPFFFEPNFDAIIAPLPEC---VKMSGKPALFQPLLYGDHLLGKVNSNFD 322
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1173111609|ref|XP_020529662.1| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X3 [Amborella trichopoda]) HSP 1 Score: 133.265 bits (334), Expect = 1.859e-34 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176 H+DYG LTL+N D+ ALQ RN G WI+A PIPGT + NIGDML WSNG ++ T HRV+ + RISIPFFFEPN D +V PL C+ K + V++ DHL KV NNF+ Sbjct: 188 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 305
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1028576761|gb|OAJ45065.1| (hypothetical protein BDEG_28232 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 134.035 bits (336), Expect = 1.960e-34 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGK--IYSSVLFADHLRSKVTNNFS 176 +H+DYGCLT+LN DE+T ALQ ++ G WI ADPIPG ++NIGDM++ W+N + ST HRV+ RIS+PFFFEPN D ++ PL EC + GK ++ +L+ DHL KV +NF Sbjct: 228 EHTDYGCLTILNTDETTGALQVKSKSGEWINADPIPGAFVINIGDMVNVWTNELYTSTLHRVIHTKDSFRISVPFFFEPNFDAIIAPLPEC---VKMSGKPALFQPLLYGDHLLGKVNSNFD 346
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|769799073|ref|XP_006855229.2| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X2 [Amborella trichopoda]) HSP 1 Score: 133.265 bits (334), Expect = 3.212e-34 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176 H+DYG LTL+N D+ ALQ RN G WI+A PIPGT + NIGDML WSNG ++ T HRV+ + RISIPFFFEPN D +V PL C+ K + V++ DHL KV NNF+ Sbjct: 212 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 329
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1173111606|ref|XP_020529661.1| (probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Amborella trichopoda]) HSP 1 Score: 133.65 bits (335), Expect = 5.770e-34 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 58 HSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKIYSSVLFADHLRSKVTNNFS 176 H+DYG LTL+N D+ ALQ RN G WI+A PIPGT + NIGDML WSNG ++ T HRV+ + RISIPFFFEPN D +V PL C+ K + V++ DHL KV NNF+ Sbjct: 255 HTDYGLLTLVNQDDDIAALQVRNRSGQWIWAAPIPGTFVCNIGDMLKVWSNGLYEPTLHRVINNSPRYRISIPFFFEPNFDAVVEPLDSCKEMTGGTAK-FEPVVYGDHLAGKVLNNFA 372
BLAST of EWM20558.1 vs. NCBI_GenBank
Match: gi|1148901035|ref|XP_020132862.1| (putative 2-oxoglutarate-dependent dioxygenase [Diplodia corticola] >gi|1103750138|gb|OJD36602.1| putative 2-oxoglutarate-dependent dioxygenase [Diplodia corticola]) HSP 1 Score: 132.88 bits (333), Expect = 6.858e-34 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 0 Query: 57 QHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIGDMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENYARAHGKI-YSSVLFADHLRSKVTNNF 175 +H+DYGC+TLL D++ ALQ + G+WI ADPIPG +VNIGDM+ RW+NG +KST HRV+ R+S+PFFFEP+ D + PL +C A GK+ Y V++ +HL K+ NF Sbjct: 247 EHTDYGCVTLLLADDTPNALQVQRKDGSWISADPIPGAFVVNIGDMMERWTNGLWKSTNHRVIHRGANYRVSVPFFFEPDFDARIAPLAKC--VAETGGKVQYDEVVYGEHLLGKIKGNF 364 The following BLAST results are available for this feature:
BLAST of EWM20558.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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