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Properties
| Property Name | Value |
|---|
| Product | 2-oxoglutarate-fe -dependent oxygenase domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100728g2.1133.mrna |
| Orig protein id | gnl|cribi|Naga_100728g2.1133 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037263.1 | supercontig | KK037263.1:56492..59157 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10145 ID=rna10145|Name=rna10145|organism=Nannochloropsis gaditana|type=mRNA|length=380bp
CCGCACAGTGTAGGAACGTAGCATGCGTACAGGCCTGTGCAGAATCTGCC
GTCGTCCCGGACGGTCCTATCGACGTCCTTCCTTTCCCCTTCCCGAAGGC
ACTGTCTGCCGCTTGTCTTCCTCCTTCTCCACCACCACCATTCCTGTGAT
TGACTTGAGCCCTTTCGTAGACCCACACGCCTCCGAAAGCTCAAAAAAAC
AGTGTGCAGAGGCTGTGCATCATGCGGCCGTCAATGTGGGCTTTCTCTAT
GTTAAAAACCATGGGGTAGACCCGAGTATCACGGACGGGGCACGTGCACA
TGCGCGTGCTTTTTTTTCCCTCCCTCAGGTGCGTGCACCAAGGAAGGAAG
GAGAGAGGGAGGGAGGGAGGGAGGGAGGGA back to topprotein sequence of rna10145 >rna10145-protein ID=rna10145-protein|Name=rna10145|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MSSLLSFSSSCPHPSVTRGISSLPLFSWNTASPYVSFLSHFLKNAFPLPF
LHSLLPQHSDYGCLTLLNMDESTQALQARNTQGAWIFADPIPGTLLVNIG
DMLSRWSNGKFKSTPHRVLPAVGKARISIPFFFEPNLDTLVVPLRECENY
ARAHGKIYSSVLFADHLRSKVTNNFSFLEPSPTATPLTGSKVHTVDGKGS
ERH back to topmRNA from alignment at KK037263.1:56492..59157+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10145 ID=rna10145|Name=rna10145|organism=Nannochloropsis gaditana|type=mRNA|length=2666bp|location=Sequence derived from alignment at KK037263.1:56492..59157+ (Nannochloropsis gaditana)
CCCGCCTGTCTCTTCCCAGGAACGAGAGAGCCTTTCCTCAGGCCTCGGGT
GCGGCGAggtccgtccctccccatcctccctccctccctcccccccttct
tcgcgcggtgcttccctttcccctctggacacttccttccttctcagccC
TTCATGGCTGTCGTTTTCTTGTCAATATATGCGACAGAggctttcttttt
cttgtcaaTATATACGACAAAGGGGCGTGTTCCCTTTATACCCGATGCCC
TCGGGTTTGATGGGgatccccccctccctccctccttatgCCCTCCTATT
CACTCGATATCCCCCctactttcctttctttcttctttgaGAATCTTCTc
tacctttcctcccccctctattccttctccctgagGTCTCTccgcccatg
tcctccctcctctccttttcttcctcttgcccccaTCCCTCGGTGACGCG
TGGAATATCTTCCCTGCCTTTATTTTCTTGGAATACCGCCTCTCCCTATG
TGTCGTTCTTATcccattttttaaaaaatgcttttcctcttcctttcctc
cactccctcctccctcagcacTCAGATTACGGGTGTCTGACCCTCCTGAA
CATGGATGAGTCGACGCAGGCGTTACAGGTAAGGTGTcaatggagggggg
aaatatCCGGAAGCCACAGAACGCTCTCAAGGcaacgaagaagaggaagg
aaggagtcTACAGAGACCTTGAAGGCAacaaaggaggggaaggaaggaag
gcgagaagaagccagggcgaggggaaaaagaggataGCACGCGAGCTATT
TGACGTGCATTGGATTGTCTTGATTTGGataccctttcctccatggaaat
cgccccgtccgccccatttctccctcccctgctcccttcctcccttcctc
cctccctccctccctctttcccctaGGCCCGCAACACCCAGGGTGCATGG
ATCTTCGCCGACCCCATTCCGGGTACCCTTTTGGTCAACATCGGTGACAT
GCTCTCCAGATGGTAGGCGCAGggttttccttttcttcccttcctcccct
tcacgtCGCCTCATCTAGCCTCCCACGTCCTGTGCCTTTTGTTTTCCATT
CTCGGCCTCCCTTGTCGAGAAAAACGGCAGCATTTCCTTCCAATTTCCTT
GCCTTTGgtccttcatttcctccatttcctgccTTTGCCCATCACCTTTC
CTGTCTCGTTCTATCACTTTCCTCGTGGCAACCTTCTTCCAATGATAAAG
GAAAtgttcccccccatcctcagCCCACTTTCCCCTCAATAGTTCGAGAC
AAGCTTGTCCCCTCTGATcacgcctccctttctccctttctccctccctc
cttccttccctccttctctccctctctctcaggTCGAACGGGAAATTCAA
AAGCACGCCACACCGTGTCCTCCCCGCAGTGGGAAAGGCTCGAATCTCCA
TTCCATTTTTCTTTGAGCCCAATTTGGACACCCTGGTGGTGCCTCTGCGT
GAATGCGAGAACTACGCCCGAGGTAAAGTTAGGGTTTGGGTTAGGGCCTG
AATTGGATTTGCCTTTCACATCCCTTAAGTACAAACATGTGTCTGGATGA
ATGGTCGATACTTATTCATGGCCTGAACTTGCCGTTATGTATTATGTATT
TGAGATTGTCTTTCTTCAACTTCAGTCGTACGCCTTCTTTCTGAGGACAG
TTGGGAGATACGTTCTAAATTACTTCGCTGACCACCTTCCATATTCTTTA
CTTCTTATATAACTATATTATATTGTATATTACAAAGCGCACGGGAAGAT
TTACTCCTCCGTCCTGTTTGCCGATCATTTGCGCTCGAAAGTCACGAATA
ACTTTTCCTTTTTGGAGCCGAGTCCGACTGCAACGCCACTGACCGGGTCA
AAGGTCCACACTGTTgacggaaagggaagcgaaaGACACTGATGGTTAGA
CACGGTGTCAATAGGCGACTTATACAGACTGTagctgggagaaggaggtg
acaATAAAAATGTAACTAAGGCACCTGCAACAGTCTCTCATTGCTTATCG
ATGTGTAAAAGGCATGAAGGCATGTATAATTTGCCTATAAACTTTGAGTC
TTTCGCTCGCATATGGGCAACGTTTTCTCTAAAATTTCTTGTTCGATATC
TCATCAAATTGGTATGCTACGTTTACGTGGTCATGCGGTGTGATTGGGAT
TCTTAAAATGGCTAATGGCTATCACGTGGCTGAAGCGTGTGTTTTGAGGT
CATTCCGGAGTCGAGTACGAGTATGCTGGACTGATCCTATATGATCAGCT
GGAGAGTTAAGAAACACGGGGGGGCATCGGACTTCTGATGCAGTAGGCAC
GTCTTTGTCGCCATCTGACAGGAGTAGGCCGCACTTGTCCTAGCTGTGTC
TCCTCAAATCGTCAATTATATCAACATAGACTACTACGCTGTGTAGAATT
TGTAAGTGATGCGCAACCCATCCAGAATCAGAATGAAACGATCTATGAAC
AATATGAACGACCACACAAGGCGCTGTTTGAGTCCCAGTTGCACCAAGTA
TGAAGAGGCGCCGATGATGCCGGAGGCAGAAGCCAAAGGGTTGCGGTACG
TAACATCCTATGTTGAGCAACAAAGCGATTAAGAGCCATGCAATAGAAAG
TCAACCATGACTATCC back to topCoding sequence (CDS) from alignment at KK037263.1:56492..59157+ >rna10145 ID=rna10145|Name=rna10145|organism=Nannochloropsis gaditana|type=CDS|length=2448bp|location=Sequence derived from alignment at KK037263.1:56492..59157+ (Nannochloropsis gaditana)
atgtcctccctcctctccttttcttcctcttgcccccaTCCCTCGGTGAC
GCGTGGAATATCTTCCCTGCCTTTATTTTCTTGGAATACCGCCTCTCCCT
ATGTGTCGTTCTTATcccattttttaaaaaatgcttttcctcttcctttc
ctccactccctcctccctcagcacTCAGATTACGGGTGTCTGACCCTCCT
GAACATGGATGAGTCGACGCAGGCGTTACAGGCCCGCAACACCCAGGGTG
CATGGATCTTCGCCGACCCCATTCCGGGTACCCTTTTGGTCAACATCGGT
GACATGCTCTCCAGATGgTCGAACGGGAAATTCAAAAGCACGCCACACCG
TGTCCTCCCCGCAGTGGGAAAGGCTCGAATCTCCATTCCATTTTTCTTTG
AGCCCAATTTGGACACCCTGGTGGTGCCTCTGCGTGAATGCGAGAACTAC
GCCCGAGCGCACGGGAAGATTTACTCCTCCGTCCTGTTTGCCGATCATTT
GCGCTCGAAAGTCACGAATAACTTTTCCTTTTTGGAGCCGAGTCCGACTG
CAACGCCACTGACCGGGTCAAAGGTCCACACTGTTgacggaaagggaagc
gaaaGACACTGAatgtcctccctcctctccttttcttcctcttgccccca
TCCCTCGGTGACGCGTGGAATATCTTCCCTGCCTTTATTTTCTTGGAATA
CCGCCTCTCCCTATGTGTCGTTCTTATcccattttttaaaaaatgctttt
cctcttcctttcctccactccctcctccctcagcacTCAGATTACGGGTG
TCTGACCCTCCTGAACATGGATGAGTCGACGCAGGCGTTACAGGCCCGCA
ACACCCAGGGTGCATGGATCTTCGCCGACCCCATTCCGGGTACCCTTTTG
GTCAACATCGGTGACATGCTCTCCAGATGgTCGAACGGGAAATTCAAAAG
CACGCCACACCGTGTCCTCCCCGCAGTGGGAAAGGCTCGAATCTCCATTC
CATTTTTCTTTGAGCCCAATTTGGACACCCTGGTGGTGCCTCTGCGTGAA
TGCGAGAACTACGCCCGAGCGCACGGGAAGATTTACTCCTCCGTCCTGTT
TGCCGATCATTTGCGCTCGAAAGTCACGAATAACTTTTCCTTTTTGGAGC
CGAGTCCGACTGCAACGCCACTGACCGGGTCAAAGGTCCACACTGTTgac
ggaaagggaagcgaaaGACACTGAatgtcctccctcctctccttttcttc
ctcttgcccccaTCCCTCGGTGACGCGTGGAATATCTTCCCTGCCTTTAT
TTTCTTGGAATACCGCCTCTCCCTATGTGTCGTTCTTATcccatttttta
aaaaatgcttttcctcttcctttcctccactccctcctccctcagcacTC
AGATTACGGGTGTCTGACCCTCCTGAACATGGATGAGTCGACGCAGGCGT
TACAGGCCCGCAACACCCAGGGTGCATGGATCTTCGCCGACCCCATTCCG
GGTACCCTTTTGGTCAACATCGGTGACATGCTCTCCAGATGgTCGAACGG
GAAATTCAAAAGCACGCCACACCGTGTCCTCCCCGCAGTGGGAAAGGCTC
GAATCTCCATTCCATTTTTCTTTGAGCCCAATTTGGACACCCTGGTGGTG
CCTCTGCGTGAATGCGAGAACTACGCCCGAGCGCACGGGAAGATTTACTC
CTCCGTCCTGTTTGCCGATCATTTGCGCTCGAAAGTCACGAATAACTTTT
CCTTTTTGGAGCCGAGTCCGACTGCAACGCCACTGACCGGGTCAAAGGTC
CACACTGTTgacggaaagggaagcgaaaGACACTGAatgtcctccctcct
ctccttttcttcctcttgcccccaTCCCTCGGTGACGCGTGGAATATCTT
CCCTGCCTTTATTTTCTTGGAATACCGCCTCTCCCTATGTGTCGTTCTTA
Tcccattttttaaaaaatgcttttcctcttcctttcctccactccctcct
ccctcagcacTCAGATTACGGGTGTCTGACCCTCCTGAACATGGATGAGT
CGACGCAGGCGTTACAGGCCCGCAACACCCAGGGTGCATGGATCTTCGCC
GACCCCATTCCGGGTACCCTTTTGGTCAACATCGGTGACATGCTCTCCAG
ATGgTCGAACGGGAAATTCAAAAGCACGCCACACCGTGTCCTCCCCGCAG
TGGGAAAGGCTCGAATCTCCATTCCATTTTTCTTTGAGCCCAATTTGGAC
ACCCTGGTGGTGCCTCTGCGTGAATGCGAGAACTACGCCCGAGCGCACGG
GAAGATTTACTCCTCCGTCCTGTTTGCCGATCATTTGCGCTCGAAAGTCA
CGAATAACTTTTCCTTTTTGGAGCCGAGTCCGACTGCAACGCCACTGACC
GGGTCAAAGGTCCACACTGTTgacggaaagggaagcgaaaGACACTGA back to top
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