rna10110, rna10110 (mRNA) Nannochloropsis gaditana

Overview
Namerna10110
Unique Namerna10110
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length927
Alignment locationKK037262.1:68937..70032 -

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Properties
Property NameValue
ProductPutative S-adenosyl-L-methionine-dependent methyltransferase MidA
Orig transcript idgnl|cribi|Naga_100736g1.10601.mrna
Orig protein idgnl|cribi|Naga_100736g1.10601
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:68937..70032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100736g1gene9813Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20594.1cds10079Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10110rna10110-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10110 ID=rna10110|Name=rna10110|organism=Nannochloropsis gaditana|type=mRNA|length=927bp
GAGATTATTAAATACACCCAAAAACATCTTTTTCCCCCAACTAAACCCAA
AAATTTCATGATAAAAGTTAAATTAGTAATTTAAAGTCACCTGACCTATT
TTTAATGTGCACAGCATGCTTAGTATCGGTGCATTGGCGCAGGTTGAGCT
GCATTTTCCTCGCCATCAGCTGCAATGTTGACCAAGCGACCGAGCAAGGC
AGGCGTTCTCTTTCTGAAAGGCGTAAGAGAATAAAATTGGCAAAAACAAA
AATACCAGAGTATCCATGGGTGTTTCGTCATAAGCGTCGTCTCTCCCGTG
TCCCGGCACCCAGTGCTCTCAGCCCAAAGAGCACTTTTTATCCTGCGGGT
CCCTTGAGGGAAGAATCAAAAACTACCCGCCAGCCTCCGAGCCAAGGCGT
TCTTCCTGGACCCGTGCCACTCCCCTTGATTTCACTCTGATGTTCTCATA
CCCCTACGGTGTCATTTTCGTGAGCTGATGCTCTCAAACCGTGACAGAGT
TCTCGTGATCGGGAGGCTTCTTCCAGAGGAGTGGCACACTTTTTTTCCTC
CCGTCCATTTCTATGTATCCAGGGAGTAGAGTGCATGGCGCTATCAAGAA
ATCAAGTCCTGCAGAGCCCTCCACCTCGACTGATGTGATCGTTGAGCCCA
TGTCTTTGATATGACGGCCTTTTCTGGAAGGCATTACATTGCCAGGCCGG
GGAGGAAGCTCGATGGCGTCAATTCATCAGGACGAGGGAGTCATTGCAAT
TGAGGAGCCTTGAACCTTGCCCTGCGACCAAGGCATGCGCGAAAGGCTTC
GCGTCGTATCCTCATCCTGCCAAGATGTGTCCCGCCCCGCAGCAACAGCC
CGTGGACAGCCCGAACGGATCGAACAGGCGGCCGTCACGAGTCCTCAGGA
TCGGAAAGCTCCTGGGCCCATCGCATC
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protein sequence of rna10110

>rna10110-protein ID=rna10110-protein|Name=rna10110|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGK
VRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENY
REHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPA
SLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPP
ALEAPGGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFF
PVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCT
RSGYNPMLEDFLNTCFFVAEAKDPSAREGRSRRATPRSRR
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mRNA from alignment at KK037262.1:68937..70032-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10110 ID=rna10110|Name=rna10110|organism=Nannochloropsis gaditana|type=mRNA|length=1096bp|location=Sequence derived from alignment at KK037262.1:68937..70032- (Nannochloropsis gaditana)
ATGGCCGAAAAACAGCGAGAGCGCCTGAGGCCCCGGCACGGGCACGTGTG
CCGGGTCGTGGAGCAGGACGCGGTGGAGTGGGCCACGGCGACGGGGGAGG
ACAGGGAGTGGGAAGGCGGGAGGGAGGGCGGGGGGAAGGGCGGGGGGAAG
GTCAGGGGCCCGGCGACGTCTACACTTGTCGTTCTCGCCTTGGAAGTTCT
GGACAATCTGCCTCACGACAAGGTCTTGTGGACGGAGGAGGGGGGAGAGT
GGCGCCTCCGCGAGTGCGTGGTGCGGGGGAACGAAAATACCGAAAATTAC
CGAGAGCACCACCGAGCCCTAGCCGACGAGCGCATCGCTCTCTTGCTGCA
GCTCCAACCGGCCTTGGCCCGTCGCATTGACCCTCGCGAGCAGGGCGTGG
ACCGGACTCTGGGAAGGTGGCAAAGGAGCCTGACGCGACTCCTGCCGGCG
AGTCTCGCGCGCACCCTGGGTGGTGACCGAGCCCGTCCATGCGCGGCCTT
CGTGCCCACGGGGATGGTTGACTTCGTGGAGGGACTCTGCACGGCCTTCC
CGCGCCGGCACCACTTCCTTTTCGCGGACTTCGACTCCCTCCCCCCCCCG
GCCTTGGAGGCCCCCGGGGGAGAAGAGGAGGAAGCCCCCGACCTGCGGGC
CCTCAACCCTCCATTAGTGACGAGTCGGGATCCGGCTACGGGGCAGCATC
GCGACCATCCCTCCTACCTCTCGCACAAGGGCAGCGCCGACATCTTTTTC
CCCGTGGACTTTGCGTTGCTCCAAGAAGTCTACCGTTTCTTCGCGAGCCG
GGCCGACCGGAAGGGTGGGGGGCAGGCCTCGGTGAGAGTGCTTAAGTCGG
CGCGATTTTTGGAGAGGTATGGGGAGGAGGGCGGTCAGGGAACCTGCACG
AGGTCGGGGTATAACCCCATGCTTGAGGACTTTCTGAACACCTGCTTCTT
CGTTGCCGAGGCCAAGGATCCCTCGGCTAGGGAGGGGCGTTCGAGAAGGG
CAACTCCACGGTCGAGACGATGATATATGTGGATAAAGGACACGAAACGA
AAGCAACCAAAGCTGTAACAAATTAAAGAAGGGTATATCACTCACT
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Coding sequence (CDS) from alignment at KK037262.1:68937..70032-

>rna10110 ID=rna10110|Name=rna10110|organism=Nannochloropsis gaditana|type=CDS|length=1023bp|location=Sequence derived from alignment at KK037262.1:68937..70032- (Nannochloropsis gaditana)
ATGGCCGAAAAACAGCGAGAGCGCCTGAGGCCCCGGCACGGGCACGTGTG
CCGGGTCGTGGAGCAGGACGCGGTGGAGTGGGCCACGGCGACGGGGGAGG
ACAGGGAGTGGGAAGGCGGGAGGGAGGGCGGGGGGAAGGGCGGGGGGAAG
GTCAGGGGCCCGGCGACGTCTACACTTGTCGTTCTCGCCTTGGAAGTTCT
GGACAATCTGCCTCACGACAAGGTCTTGTGGACGGAGGAGGGGGGAGAGT
GGCGCCTCCGCGAGTGCGTGGTGCGGGGGAACGAAAATACCGAAAATTAC
CGAGAGCACCACCGAGCCCTAGCCGACGAGCGCATCGCTCTCTTGCTGCA
GCTCCAACCGGCCTTGGCCCGTCGCATTGACCCTCGCGAGCAGGGCGTGG
ACCGGACTCTGGGAAGGTGGCAAAGGAGCCTGACGCGACTCCTGCCGGCG
AGTCTCGCGCGCACCCTGGGTGGTGACCGAGCCCGTCCATGCGCGGCCTT
CGTGCCCACGGGGATGGTTGACTTCGTGGAGGGACTCTGCACGGCCTTCC
CGCGCCGGCACCACTTCCTTTTCGCGGACTTCGACTCCCTCCCCCCCCCG
GCCTTGGAGGCCCCCGGGGGAGAAGAGGAGGAAGCCCCCGACCTGCGGGC
CCTCAACCCTCCATTAGTGACGAGTCGGGATCCGGCTACGGGGCAGCATC
GCGACCATCCCTCCTACCTCTCGCACAAGGGCAGCGCCGACATCTTTTTC
CCCGTGGACTTTGCGTTGCTCCAAGAAGTCTACCGTTTCTTCGCGAGCCG
GGCCGACCGGAAGGGTGGGGGGCAGGCCTCGGTGAGAGTGCTTAAGTCGG
CGCGATTTTTGGAGAGGTATGGGGAGGAGGGCGGTCAGGGAACCTGCACG
AGGTCGGGGTATAACCCCATGCTTGAGGACTTTCTGAACACCTGCTTCTT
CGTTGCCGAGGCCAAGGATCCCTCGGCTAGGGAGGGGCGTTCGAGAAGGG
CAACTCCACGGTCGAGACGATGA
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Synonyms
Publications