EWM20594.1, cds10079 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|585100337|gb|EWM20594.1| (Putative S-adenosyl-L-methionine-dependent methyltransferase MidA [Nannochloropsis gaditana]) HSP 1 Score: 687.952 bits (1774), Expect = 0.000e+0 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVAEAKDPSAREGRSRRATPRSRR 340
MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVAEAKDPSAREGRSRRATPRSRR
Sbjct: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVAEAKDPSAREGRSRRATPRSRR 340
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|953491208|emb|CEG46067.1| (Putative S-adenosyl-L-methionine-dependent methyltransferase MidA [Plasmopara halstedii]) HSP 1 Score: 143.28 bits (360), Expect = 2.076e-35 Identity = 112/332 (33.73%), Postives = 153/332 (46.08%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNE--NTENYREHHRALADERI-ALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEE----------EEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
MAE+QR+R+ H C +V +D + +A A P TS LA EVLDNLPHDKV + + G+W E VVR N E R + D I LL L R+ + + L R R R LG +AF+PTG + ++ L AFP+ HH + ADFDSLP P L+ + A L A N PLV S+ TG +DH +YL G ADIFFP DF+ L++ Y F R + + V+KS+ FL+ + + T TR +NP+LED+ NT F ++
Sbjct: 163 MAERQRKRVAAVHPQQCTIVNEDILNFAEA---------------------HAPITSECFFLAFEVLDNLPHDKV--SLQNGQWF--ETVVRNQSGANGPMLEEARRPIEDMLIRETLLHFGCDLPLRVSYKN---NTGLARHVR-----------RLLGIQDVAFTSAFIPTGAMQLLKTLRIAFPK-HHLIAADFDSLPAPELDTKSSIKAISHPLSPTATSAGTLSAGNAPLVASK--ITGVTQDHDTYLVQGGVADIFFPTDFSKLKKAYCFALQREPDE------ISVVKSSTFLKEFADVEKTKTITR--FNPLLEDYSNTSFILS 444
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|675212283|ref|XP_008915026.1| (hypothetical protein PPTG_18889 [Phytophthora parasitica INRA-310] >gi|567946303|gb|ETK72114.1| hypothetical protein L915_20734 [Phytophthora parasitica] >gi|567974970|gb|ETL25544.1| hypothetical protein L916_20617 [Phytophthora parasitica] >gi|568004434|gb|ETL78758.1| hypothetical protein L917_20479 [Phytophthora parasitica] >gi|568034357|gb|ETM32030.1| hypothetical protein L914_20487 [Phytophthora parasitica] >gi|568084725|gb|ETM99647.1| hypothetical protein PPTG_18889 [Phytophthora parasitica INRA-310] >gi|570312502|gb|ETO60450.1| hypothetical protein F444_21355 [Phytophthora parasitica P1976] >gi|570936281|gb|ETP01538.1| hypothetical protein F441_21230 [Phytophthora parasitica CJ01A1] >gi|570966592|gb|ETP29711.1| hypothetical protein F442_21171 [Phytophthora parasitica P10297]) HSP 1 Score: 136.346 bits (342), Expect = 8.920e-33 Identity = 115/338 (34.02%), Postives = 153/338 (45.27%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRL---------LPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPP---------ALEAP-GGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
MAE+QR+R+ H C V+ QD + +A P +S LALEVLDNLPHDKV T + G+W E +V+ + ADE A P L + P + + R R+ L L + R LG D +AFVPTG + + L T FP+ HH + ADFDSLP P A+E P A L A N PLV S+ TG +DH +YL G ADIFF DF L+ R + S R+ V V+KS+ FL+ + + T TR YNP+LED+ NT F ++
Sbjct: 164 MAERQRQRVAAVHPKQCTVINQDILTFA---------------------DTHAPVSSRCFFLALEVLDNLPHDKV--TLQNGKWY--ETIVKMHSG-----------ADESAA-----GPVLEEAMRPVKDMLIRQTLRYFGCELPLHVSYKNNSGLAQRVRRMLGKDDPVLNSAFVPTGAMQLLNTLRTTFPK-HHLIAADFDSLPAPNLDENSPIKAIEHPLSATATSAGTLFAGNAPLVASK--LTGVTKDHDTYLVQGGIADIFFATDFDRLK---RAYCSALQRQPD---EVSVVKSSDFLKEFADVQKTKTITR--YNPLLEDYSNTSFILS 449
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|566008827|gb|ETI31738.1| (hypothetical protein F443_21332 [Phytophthora parasitica P1569]) HSP 1 Score: 134.806 bits (338), Expect = 2.877e-32 Identity = 114/338 (33.73%), Postives = 153/338 (45.27%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRL---------LPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALE--AP--------GGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
MAE+QR+R+ H C V+ QD + +A P +S LALEVLDNLPHDKV T + G+W E +V+ + ADE A P L + P + + R R+ L L + R LG D +AFVPTG + + L T FP+ HH + ADFDSLP P L+ +P A L A N PLV S+ TG +DH +YL G ADIFF DF L+ R + S R+ V V+KS+ FL+ + + T TR YNP+LED+ NT F ++
Sbjct: 164 MAERQRQRVAAVHPKQCTVINQDILTFA---------------------DTHAPVSSRCFFLALEVLDNLPHDKV--TLQNGKWY--ETIVKMHSG-----------ADESAA-----GPVLEEAMRPVKDMLIRQTLRYFGCELPLHVSYKNNSGLAQRVRRMLGKDDPVLNSAFVPTGAMQLLNTLRTTFPK-HHLIAADFDSLPAPNLDENSPIKAIKHPLSATATSAGTLFAGNAPLVASK--LTGVTKDHDTYLVQGGIADIFFATDFDRLK---RAYCSALQRQPD---EVSVVKSSDFLKEFADVQKTKTITR--YNPLLEDYSNTSFILS 449
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|673029078|ref|XP_008868500.1| (hypothetical protein H310_05540 [Aphanomyces invadans] >gi|574476117|gb|ETW03116.1| hypothetical protein H310_05540 [Aphanomyces invadans]) HSP 1 Score: 131.724 bits (330), Expect = 2.279e-31 Identity = 109/331 (32.93%), Postives = 155/331 (46.83%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATS-TLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEEE-----------EAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
MA +Q ER++ H + VV D + +++ R P S + +A+EVLDNLPHDKV T+EGG+W E V N + EHHR L D I L+ P + REQ + R+ R R+ +L +AFVPTG + + L T+FP +HH + ADFD LP P+L+A + + L A N PLV S+ G DH +YL G AD+FF DF L+ Y +A + + V ++KS FLE++ + T T GYNP+LED+ NT F ++
Sbjct: 151 MAARQSERIK-DHAGIATVVNADILTYSS----------------------RFPKFSDSCYFVAMEVLDNLPHDKV--TQEGGQW--HETWV----NPKTLSEHHRPLTDPLIRQTLEHFPL---ELPLREQY--KPAARFLRKALRMPEKTLH-----------SAFVPTGAMQLLNTLKTSFP-KHHLIAADFDELPAPSLDAASATHQLYNHPRSPTSTASGSLHAANAPLVASK--TAGVTFDHDTYLVEGGIADVFFSTDFIKLKHAY----CQAHHRHSHE--VSIVKSRAFLEKFADIA--KTRTILGYNPLLEDYANTSFILS 423
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|698805576|ref|XP_009835817.1| (hypothetical protein H257_10831 [Aphanomyces astaci] >gi|574109226|gb|ETV74730.1| hypothetical protein H257_10831 [Aphanomyces astaci]) HSP 1 Score: 120.168 bits (300), Expect = 3.682e-27 Identity = 103/330 (31.21%), Postives = 147/330 (44.55%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPA-TSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEA----PGGEEEEAPD------LRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
MA +QRER++ H V V+ D + ++ + PA + +A+EVLDNLPHDKVL ++GGEW + E R L D + L P +D L + TR + + +G +AFVPTG + + L T+FP+ HH + ADFD LP P+L+A P +P L A N PLV S+ G DH +YL G AD+FF DF L+ Y A + Q V ++KS+ FL+ + + T T GYNP+LED+ NT F ++
Sbjct: 133 MAARQRERIK-DHAGVATVINTDILTYS----------------------AQFPAFKDSCYFVAMEVLDNLPHDKVL--QDGGEW------FETWVDPTTLSEQRRPLEDPLVRQTLDHFP------------IDLPLREGYKPATRFV----RKAMGMADKTLHSAFVPTGAMQLLHTLHTSFPK-HHLIAADFDELPAPSLDASSSHPLFHHPRSPTSTASGPLHAANAPLVASK--TAGVTCDHDTYLVEGGIADVFFSTDFVKLKHAY----CLAQHRQAHQ--VSIVKSSAFLQEFADTA--KTRTILGYNPLLEDYANTSFILS 404
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|298709956|emb|CBJ31678.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.783 bits (299), Expect = 2.023e-26 Identity = 112/357 (31.37%), Postives = 153/357 (42.86%), Query Frame = 0
Query: 1 MAEKQRERLRPRHGHVCRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLW-----TEEGGEW---RLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRI-DPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPG-----------GEEEEAPD---LRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFAS-----------RADRKGGGQASVRVLKSARFLERYGEEGGQGTCTR--SGYNPMLEDFLNTCFFVAEA 321
+AE Q ER+ H + CRVV + +EW + D L +E+LDNLPHDK+ W TEE G+ +L E VV +RE R + D I LL + P LA I D RE + + G + CAAF+PTG + V+GL PR H + ADFDS A G E A + L A P+V+SRDP +G DH +Y+ GSADIFFP F L ++ S R +R G G+ V+K FL + + CTR SG+NP+++DF N+ F++ A
Sbjct: 219 LAELQTERVCSVHEN-CRVVNANVLEWGMSGEVDPR---------------------PCFFLGMELLDNLPHDKIAWVAPSSTEEQGDAGTPQLCETVVVETPGG-GFREMFRPVRDTLIRQLLTVCPELAAMIRDRRETESEPPSASPFAKMFAFFSNGGGGGRGDLKPEHCAAFIPTGYLRLVQGLRARMPR-HRAILADFDSFADSAGMGGGPSLTAVGGAAGSAGETATNDESLTAFQAPIVSSRDPVSGVVTDHATYMVPLGSADIFFPTSFDRLSRLHSAICSAGGTVGSQTGRRQERVGRGRG--LVVKQGDFLREFADL----PCTRTFSGFNPLVDDFRNSSVFISGA 545
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|290996947|ref|XP_002681043.1| (hypothetical protein NAEGRDRAFT_78474 [Naegleria gruberi] >gi|284094666|gb|EFC48299.1| hypothetical protein NAEGRDRAFT_78474 [Naegleria gruberi]) HSP 1 Score: 113.235 bits (282), Expect = 4.484e-25 Identity = 85/290 (29.31%), Postives = 134/290 (46.21%), Query Frame = 0
Query: 61 VLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPAL-----ARRIDPREQGV---DRTLGRWQRSLTRLLPAS-------LARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPP--------PALEAPGGEEEEAPDLRA--------LNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
V+A+EVLDN HDK+ +G ++EC V ++ Y E + DE I L L + + P D+T G + + + S L ++GGD ++PT + +E L FP +HHF+ ADFD L P ++ + + LR L+P ++S D + + SYL KG DIFF DF ++Q+VY S+ + GG V+KS++F++ Y E + T+SGYNP+L+D+ N FF++
Sbjct: 75 VIAMEVLDNCAHDKISIDADGN---VKECHVFFDKGKNYYEEVYLDCRDELIIRYLTLAGVIETSNTKTKFSPNFTYTSLQDKTKGAFTKLIQSFSSKSTNGMRSLLMNSIGGDH----VFYIPTVQLQIIEKLQQNFP-KHHFICADFDYLGTDESGESNRPLVQKKFKFMKTSNLLRKIREKRTLFLSPEDISSEDNFSIESHAFRSYLVPKGECDIFFATDFNIMQQVY----SKVCQDQGGLRGSLVMKSSQFMKEYAEY--ENFTTKSGYNPLLKDYTNFSFFLS 350
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|813103178|ref|XP_012194050.1| (hypothetical protein SPRG_18834 [Saprolegnia parasitica CBS 223.65] >gi|641541929|gb|KDO35674.1| hypothetical protein SPRG_18834 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 109.768 bits (273), Expect = 2.162e-23 Identity = 97/313 (30.99%), Postives = 137/313 (43.77%), Query Frame = 0
Query: 17 CRVVEQDAVEWATATGEDREWEGGREGGGKGGGKVRGPATSTLVVLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGRWQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEE----------EEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVA 319
C+V+ D + ++ KV P +A+EVLDNLPHDKV T GEW ++ H R A+E L P +A ++ + G ++R T L L +G AAFVPTG + + L +FP+ HH + ADFD LP P+L+ + + L A N PLV S+ G DH +YL G ADIFFP DF L++ Y D + V ++KS FL+ +GE T T GYNP++ED+ NT F ++
Sbjct: 168 CKVINSDILTYSA-----------------NHPKVNDPC----FFIAMEVLDNLPHDKV--TLADGEW---------------FQTHVRDDAEELQPLR---DPLIAEALEYFSCEIPLR-GTFKR--TSGLATQLRSMIGMREKLLNAAFVPTGAMQLLHTLHKSFPK-HHLIAADFDELPAPSLDKAATHQPYDHPRSATSTASGPLHAANAPLVASK--TDGVTVDHDTYLVPGGIADIFFPTDFIKLKQAYCRKMELKDHE------VSIVKSGAFLKEFGE--VDKTRTILGYNPLVEDYANTSFILS 425
BLAST of EWM20594.1 vs. NCBI_GenBank
Match: gi|545371876|ref|XP_005650460.1| (DUF185-domain-containing protein [Coccomyxa subellipsoidea C-169] >gi|384252440|gb|EIE25916.1| DUF185-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 104.375 bits (259), Expect = 2.412e-21 Identity = 88/262 (33.59%), Postives = 118/262 (45.04%), Query Frame = 0
Query: 61 VLALEVLDNLPHDKVLWTEEGGEWRLRECVVRGNENTENYREHHRALADERIALLLQLQPALARRIDPREQGVDRTLGR--WQRSLTRLLPASLARTLGGDRARPCAAFVPTGMVDFVEGLCTAFPRRHHFLFADFDSLPPPALEAPGGEEEEAPDLRALNPPLVTSRDPATGQHRDHPSYLSHKGSADIFFPVDFALLQEVYRFFASRADRKGGGQASVRVLKSARFLERYGEEGGQGTCTRSGYNPMLEDFLNTCFFVAE 320
+L +EVLDN PHD+V W L+ V++ + E L D+ I Q LA + P E G+ W R L A T+ F+PT + ++ L A P H L ADFD LP + PG N PL + GQ DH +YL GSADIFFP DF +L+ +Y A + GG S V+KS F++RY T T +GYNP+L+D+ NT FFV +
Sbjct: 229 LLLMEVLDNCPHDRVHRESTSNPW-LQTAVIQKQVSAHATLELLEPLTDDLI------QQCLA--VGPWEHN-----GKPVWHRLL------DWANTI----------FLPTKCMMLLDTLVKACPF-HCILAADFDQLPETRI--PGK-----------NAPLAATT--VGGQTIDHSTYLMEPGSADIFFPTDFYMLERMYGVLAKQGLASAGG-ISTAVMKSEAFMKRYASIA--DTTTSNGYNPLLQDYSNTSFFVGQ 441 The following BLAST results are available for this feature:
BLAST of EWM20594.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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