EWM20610.1, cds10063 (CDS) Nannochloropsis gaditana

Overview
NameEWM20610.1
Unique Namecds10063
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:32493..32740 -
Alignment locationKK037262.1:32421..32445 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20610.1
Producttkl family protein kinase
Orig transcript idgnl|cribi|Naga_103740g1.4995.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:32493..32740 -
KK037262.1supercontigKK037262.1:32421..32445 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
Homology
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|585100373|gb|EWM20610.1| (tkl family protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 188.348 bits (477), Expect = 9.844e-61
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV 90
            MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV
Sbjct:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV 90          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470505252|ref|XP_004348548.1| (protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440801065|gb|ELR22090.1| protein kinase domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 65.4698 bits (158), Expect = 2.016e-10
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYI------YYK 60
            M+ +  PWA V   Q+  +++   RL+IP + DP+ A IM+ CW QNP  RP+FE +      YYK
Sbjct:  557 MMVKKRPWAGVEPVQIITSVVGNTRLRIPKDCDPIFAQIMKMCWRQNPAQRPSFEKLVDMLSSYYK 622          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470400411|ref|XP_004335504.1| (thioredoxin, putative [Acanthamoeba castellanii str. Neff] >gi|440792263|gb|ELR13491.1| thioredoxin, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 64.3142 bits (155), Expect = 4.225e-10
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYI------YYK 60
            M+ +  PWA V   Q+  ++ S  RL+IP + DP+ A +M+ CW QNP  RP+F+ +      YYK
Sbjct:  495 MMARKRPWAGVEPVQIITSVTSNTRLRIPKDCDPIFAQLMKMCWRQNPSQRPSFDKVADVLSKYYK 560          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470511862|ref|XP_004352069.1| (MAP kinase, putative [Acanthamoeba castellanii str. Neff] >gi|440801990|gb|ELR22930.1| MAP kinase, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 63.929 bits (154), Expect = 7.182e-10
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERA 74
            M+ +  PWA +   QV   + +  RLKIP + DPV   +M+ CW QNP  RP+FE +   L + + TL+  + A
Sbjct:  741 MVERKRPWAGMEAVQVVTAVTTNTRLKIPKDCDPVFQRLMKMCWRQNPAHRPSFEKMVNTLSDYYKTLKQYQDA 814          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|567150413|ref|XP_006416637.1| (hypothetical protein EUTSA_v10006685mg [Eutrema salsugineum] >gi|557094408|gb|ESQ34990.1| hypothetical protein EUTSA_v10006685mg [Eutrema salsugineum])

HSP 1 Score: 60.8474 bits (146), Expect = 8.726e-9
Identity = 29/90 (32.22%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLR--ERFVTLQNQERAIGEEKALVVKTAQ 87
            + T  +PW ++   QV   +    +RL+IP   DP +ADI+R+CW+ +PR RP+F  I   L+  ++ +   N +RA+    +L+ +  Q
Sbjct:  903 LFTLQQPWGKMNPMQVVGAVGFQHRRLEIPDFVDPGIADIIRKCWQTDPRLRPSFAEIMASLKQIQKPIMSPNIQRAVPSSSSLITEQEQ 992          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934134|ref|XP_021300379.1| (serine/threonine-protein kinase CTR1-like isoform X3 [Herrania umbratica])

HSP 1 Score: 60.4622 bits (145), Expect = 1.132e-8
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
            ++T  +PW  +  AQV   +   GKRL+IP N +PV+A ++  CW  NP  RP+F Y+   L +      +QE
Sbjct:  679 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 751          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934123|ref|XP_021300373.1| (serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica] >gi|1204934125|ref|XP_021300374.1| serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica] >gi|1204934132|ref|XP_021300377.1| serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica])

HSP 1 Score: 60.4622 bits (145), Expect = 1.132e-8
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
            ++T  +PW  +  AQV   +   GKRL+IP N +PV+A ++  CW  NP  RP+F Y+   L +      +QE
Sbjct:  680 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 752          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|299469697|emb|CBN76551.1| (protein tyrosine kinase [Ectocarpus siliculosus])

HSP 1 Score: 60.4622 bits (145), Expect = 1.165e-8
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEE 78
            M  +S PW    +  VAF + SG+R+ +P   D  LAD+M +CW ++ R RP+F  I   L   F   Q   RA G E
Sbjct:  849 MFARSPPWEGHENLDVAFRVCSGERMTVPPRVDSPLADLMHKCWNESSRLRPDFASILTALTA-FAGDQELARANGVE 925          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934127|ref|XP_021300375.1| (serine/threonine-protein kinase CTR1-like isoform X2 [Herrania umbratica] >gi|1204934129|ref|XP_021300376.1| serine/threonine-protein kinase CTR1-like isoform X2 [Herrania umbratica])

HSP 1 Score: 60.077 bits (144), Expect = 1.346e-8
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
            ++T  +PW  +  AQV   +   GKRL+IP N +PV+A ++  CW  NP  RP+F Y+   L +      +QE
Sbjct:  647 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 719          
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|123485635|ref|XP_001324538.1| (TKL family protein kinase [Trichomonas vaginalis G3] >gi|121907422|gb|EAY12315.1| TKL family protein kinase [Trichomonas vaginalis G3])

HSP 1 Score: 59.6918 bits (143), Expect = 1.729e-8
Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAI 75
            MLT++ P+ +   A++A  +L+GKR K+P +T   +  ++ RCW QNP  RP F  I  +L+   V  QN   +I
Sbjct:  214 MLTETMPFIKYKDAEIAKMVLAGKRPKLPDDTPRKIKHLVTRCWSQNPSERPTFSDIVKELKHGDVVFQNTNYSI 288          
The following BLAST results are available for this feature:
BLAST of EWM20610.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100373|gb|EWM20610.1|9.844e-61100.00tkl family protein kinase [Nannochloropsis gaditan... [more]
gi|470505252|ref|XP_004348548.1|2.016e-1040.91protein kinase domain containing protein [Acantham... [more]
gi|470400411|ref|XP_004335504.1|4.225e-1039.39thioredoxin, putative [Acanthamoeba castellanii st... [more]
gi|470511862|ref|XP_004352069.1|7.182e-1037.84MAP kinase, putative [Acanthamoeba castellanii str... [more]
gi|567150413|ref|XP_006416637.1|8.726e-932.22hypothetical protein EUTSA_v10006685mg [Eutrema sa... [more]
gi|1204934134|ref|XP_021300379.1|1.132e-836.99serine/threonine-protein kinase CTR1-like isoform ... [more]
gi|1204934123|ref|XP_021300373.1|1.132e-836.99serine/threonine-protein kinase CTR1-like isoform ... [more]
gi|299469697|emb|CBN76551.1|1.165e-838.46protein tyrosine kinase [Ectocarpus siliculosus][more]
gi|1204934127|ref|XP_021300375.1|1.346e-836.99serine/threonine-protein kinase CTR1-like isoform ... [more]
gi|123485635|ref|XP_001324538.1|1.729e-837.33TKL family protein kinase [Trichomonas vaginalis G... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10094rna10094Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications