EWM20610.1, cds10063 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|585100373|gb|EWM20610.1| (tkl family protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 188.348 bits (477), Expect = 9.844e-61 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV 90
MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV
Sbjct: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV 90
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470505252|ref|XP_004348548.1| (protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440801065|gb|ELR22090.1| protein kinase domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 65.4698 bits (158), Expect = 2.016e-10 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYI------YYK 60
M+ + PWA V Q+ +++ RL+IP + DP+ A IM+ CW QNP RP+FE + YYK
Sbjct: 557 MMVKKRPWAGVEPVQIITSVVGNTRLRIPKDCDPIFAQIMKMCWRQNPAQRPSFEKLVDMLSSYYK 622
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470400411|ref|XP_004335504.1| (thioredoxin, putative [Acanthamoeba castellanii str. Neff] >gi|440792263|gb|ELR13491.1| thioredoxin, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 64.3142 bits (155), Expect = 4.225e-10 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYI------YYK 60
M+ + PWA V Q+ ++ S RL+IP + DP+ A +M+ CW QNP RP+F+ + YYK
Sbjct: 495 MMARKRPWAGVEPVQIITSVTSNTRLRIPKDCDPIFAQLMKMCWRQNPSQRPSFDKVADVLSKYYK 560
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|470511862|ref|XP_004352069.1| (MAP kinase, putative [Acanthamoeba castellanii str. Neff] >gi|440801990|gb|ELR22930.1| MAP kinase, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 63.929 bits (154), Expect = 7.182e-10 Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERA 74
M+ + PWA + QV + + RLKIP + DPV +M+ CW QNP RP+FE + L + + TL+ + A
Sbjct: 741 MVERKRPWAGMEAVQVVTAVTTNTRLKIPKDCDPVFQRLMKMCWRQNPAHRPSFEKMVNTLSDYYKTLKQYQDA 814
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|567150413|ref|XP_006416637.1| (hypothetical protein EUTSA_v10006685mg [Eutrema salsugineum] >gi|557094408|gb|ESQ34990.1| hypothetical protein EUTSA_v10006685mg [Eutrema salsugineum]) HSP 1 Score: 60.8474 bits (146), Expect = 8.726e-9 Identity = 29/90 (32.22%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLR--ERFVTLQNQERAIGEEKALVVKTAQ 87
+ T +PW ++ QV + +RL+IP DP +ADI+R+CW+ +PR RP+F I L+ ++ + N +RA+ +L+ + Q
Sbjct: 903 LFTLQQPWGKMNPMQVVGAVGFQHRRLEIPDFVDPGIADIIRKCWQTDPRLRPSFAEIMASLKQIQKPIMSPNIQRAVPSSSSLITEQEQ 992
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934134|ref|XP_021300379.1| (serine/threonine-protein kinase CTR1-like isoform X3 [Herrania umbratica]) HSP 1 Score: 60.4622 bits (145), Expect = 1.132e-8 Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
++T +PW + AQV + GKRL+IP N +PV+A ++ CW NP RP+F Y+ L + +QE
Sbjct: 679 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 751
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934123|ref|XP_021300373.1| (serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica] >gi|1204934125|ref|XP_021300374.1| serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica] >gi|1204934132|ref|XP_021300377.1| serine/threonine-protein kinase CTR1-like isoform X1 [Herrania umbratica]) HSP 1 Score: 60.4622 bits (145), Expect = 1.132e-8 Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
++T +PW + AQV + GKRL+IP N +PV+A ++ CW NP RP+F Y+ L + +QE
Sbjct: 680 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 752
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|299469697|emb|CBN76551.1| (protein tyrosine kinase [Ectocarpus siliculosus]) HSP 1 Score: 60.4622 bits (145), Expect = 1.165e-8 Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAIGEE 78
M +S PW + VAF + SG+R+ +P D LAD+M +CW ++ R RP+F I L F Q RA G E
Sbjct: 849 MFARSPPWEGHENLDVAFRVCSGERMTVPPRVDSPLADLMHKCWNESSRLRPDFASILTALTA-FAGDQELARANGVE 925
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|1204934127|ref|XP_021300375.1| (serine/threonine-protein kinase CTR1-like isoform X2 [Herrania umbratica] >gi|1204934129|ref|XP_021300376.1| serine/threonine-protein kinase CTR1-like isoform X2 [Herrania umbratica]) HSP 1 Score: 60.077 bits (144), Expect = 1.346e-8 Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNI-LSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQE 72
++T +PW + AQV + GKRL+IP N +PV+A ++ CW NP RP+F Y+ L + +QE
Sbjct: 647 LVTLQQPWKNLNPAQVVAVVGFKGKRLEIPSNVNPVVASLIELCWANNPSKRPSFSYVMECLHQVITNTASQE 719
BLAST of EWM20610.1 vs. NCBI_GenBank
Match: gi|123485635|ref|XP_001324538.1| (TKL family protein kinase [Trichomonas vaginalis G3] >gi|121907422|gb|EAY12315.1| TKL family protein kinase [Trichomonas vaginalis G3]) HSP 1 Score: 59.6918 bits (143), Expect = 1.729e-8 Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query: 1 MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRWRPNFEYIYYKLRERFVTLQNQERAI 75
MLT++ P+ + A++A +L+GKR K+P +T + ++ RCW QNP RP F I +L+ V QN +I
Sbjct: 214 MLTETMPFIKYKDAEIAKMVLAGKRPKLPDDTPRKIKHLVTRCWSQNPSERPTFSDIVKELKHGDVVFQNTNYSI 288 The following BLAST results are available for this feature:
BLAST of EWM20610.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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