rna10094, rna10094 (mRNA) Nannochloropsis gaditana

Overview
Namerna10094
Unique Namerna10094
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length632
Alignment locationKK037262.1:32421..32740 -

Link to JBrowse

Properties
Property NameValue
Producttkl family protein kinase
Orig transcript idgnl|cribi|Naga_103740g1.4995.mrna
Orig protein idgnl|cribi|Naga_103740g1.4995
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:32421..32740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103740g1gene9797Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10094rna10094-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20610.1cds10063Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10094 ID=rna10094|Name=rna10094|organism=Nannochloropsis gaditana|type=mRNA|length=632bp
TCCTCCTTCTTCCTCCTCACATCTCAGCGCCTCGACGCCTGCAGCAACTC
AAAGAAAGCGAGAAAAAACCGCCCGAGCCCGTACCTCCCTCCCTCCCTCC
CACCTCCTCCTCCTCCTCCTCCTCCCCTCCTCCTCCTCCTCCTCTTCCTC
GCAGCCCGCGACGAGACGATTGAACGGCGAACGTCCTTCTCCCTCCACGG
AAGAGGAAGGGAGGGAGGGCGGGAGGGAGGGCGGAAGGGAGGGAGTGATA
GAGGAAGACCCTGTGAGGCGGAGTGCCAGTTACATGGGCGGGACAGGGAG
GGAAGAGGGAGGGAAGGAGGAAGCGAAGGAACTGCGCCCAAATTGGTTCG
AGGGGGGGGACAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGAG
GACGAGTTATACGCGGACGTGTCGGCGGTGTTACACTTCATTGAGGGGAG
CTAGTGGTTAGCATAAGGGAGGGAAGGGGGGAAGGAGGGAGGGAGGGAGG
GAGGGAGGCAGGCAGGGAGGGAGGGAGGGAGGGAAGGAGGCAGAGATCAA
TGAGTGTTGGTGAATGAGGCTCCGGCCGCCAAATGCGTCGTGAGCCAGAA
AAGGAAAAACATCCAAATGAAGCGATTAGTGA
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protein sequence of rna10094

>rna10094-protein ID=rna10094-protein|Name=rna10094|organism=Nannochloropsis gaditana|type=polypeptide|length=90bp
MLTQSEPWARVTHAQVAFNILSGKRLKIPINTDPVLADIMRRCWEQNPRW
RPNFEYIYYKLRERFVTLQNQERAIGEEKALVVKTAQTAV
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mRNA from alignment at KK037262.1:32421..32740-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10094 ID=rna10094|Name=rna10094|organism=Nannochloropsis gaditana|type=mRNA|length=320bp|location=Sequence derived from alignment at KK037262.1:32421..32740- (Nannochloropsis gaditana)
ATGCTCACCCAGTCGGAGCCTTGGGCCCGCGTCACCCACGCCCAGGTTGC
CTTCAACATCTTGAGCGGGAAACGCCTGAAAATCCCGATAAACACCGACC
CGGTCCTGGCGGACATTATGCGTCGGTGCTGGGAGCAAAACCCCCGGTGG
CGCCCGAATTTTGAGTACATTTATTATAAATTGCGGGAGCGTTTCGTCAC
CTTACAGAACCAGGAGCGTGCCATTGGGGAGGAGAAAGCGTTGGTGGTGT
TGATGCGTCAGGGCACAACCTTCTACAAACTCCCGTATTTGAAAGGAAAA
CCGCACAAACGGCAGTTTAA
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Coding sequence (CDS) from alignment at KK037262.1:32421..32740-

>rna10094 ID=rna10094|Name=rna10094|organism=Nannochloropsis gaditana|type=CDS|length=546bp|location=Sequence derived from alignment at KK037262.1:32421..32740- (Nannochloropsis gaditana)
GAAAACCGCACAAACGGCAGTTTAAATGCTCACCCAGTCGGAGCCTTGGG
CCCGCGTCACCCACGCCCAGGTTGCCTTCAACATCTTGAGCGGGAAACGC
CTGAAAATCCCGATAAACACCGACCCGGTCCTGGCGGACATTATGCGTCG
GTGCTGGGAGCAAAACCCCCGGTGGCGCCCGAATTTTGAGTACATTTATT
ATAAATTGCGGGAGCGTTTCGTCACCTTACAGAACCAGGAGCGTGCCATT
GGGGAGGAGAAAGCGTTGGTGGTGAAAACCGCACAAACGGCAGTTTAAAT
GCTCACCCAGTCGGAGCCTTGGGCCCGCGTCACCCACGCCCAGGTTGCCT
TCAACATCTTGAGCGGGAAACGCCTGAAAATCCCGATAAACACCGACCCG
GTCCTGGCGGACATTATGCGTCGGTGCTGGGAGCAAAACCCCCGGTGGCG
CCCGAATTTTGAGTACATTTATTATAAATTGCGGGAGCGTTTCGTCACCT
TACAGAACCAGGAGCGTGCCATTGGGGAGGAGAAAGCGTTGGTGGT
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Synonyms
Publications