EWM20624.1, cds10046 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|585100401|gb|EWM20624.1| (dynein-like protein [Nannochloropsis gaditana]) HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGLEEAGRGREWWARRLFWSIPTMTPSGMFSGSAARPVISASRSRPMVKCFGGIRAT 352 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGLEEAGRGREWWARRLFWSIPTMTPSGMFSGSAARPVISASRSRPMVKCFGGIRAT Sbjct: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGLEEAGRGREWWARRLFWSIPTMTPSGMFSGSAARPVISASRSRPMVKCFGGIRAT 352
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|553194017|ref|XP_005855875.1| (dynein intermediate chain 2, axonemal [Nannochloropsis gaditana CCMP526] >gi|422293184|gb|EKU20484.1| dynein intermediate chain 2, axonemal [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 447.973 bits (1151), Expect = 1.021e-150 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0 Query: 79 MRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPK 293 MRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAY GLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPK Sbjct: 1 MRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYCGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPK 215
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|299115711|emb|CBN74276.1| (putative, Dynein intermediate chain [Ectocarpus siliculosus]) HSP 1 Score: 172.17 bits (435), Expect = 5.935e-45 Identity = 106/298 (35.57%), Postives = 149/298 (50.00%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGL 298 MEVA+ Y K R+ FG+ + +D A L +VP S + ++ +NP + T ++ H NTE + K+ SMRHVEGGWPKDVD TEQ+DV RFRKKAEKD++ K+A+K LGP++ RCMKQN TIDIY+EYF +G D+ + S+ G P+ V G T T++ ++ + ++ + F+DP + ++ V Y VWD +PN PDV L+PPSPL LRFNPK+ L Sbjct: 1 MEVAYLYTKVRSEFGKHC--SFKDVPA---FLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYF-------------DGDEVDHSSEPPSAKGLAVFRDPNAV--NGIKRTATSIN----------WHPDGPTKIAVSYSILNFQDPRFM-------------NARMPVQSY------------------VWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNL 237
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|325191153|emb|CCA25942.1| (dyneinlike protein putative [Albugo laibachii Nc14]) HSP 1 Score: 162.54 bits (410), Expect = 2.565e-41 Identity = 102/296 (34.46%), Postives = 151/296 (51.01%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVAL-KLLGPVVARCMKQNATIDIYQEYFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKA 294 ME+A+ Y+K R++FG + DT AKVL S+P + + S IR+ P + T +++ H NTE V +N+SMRH+EGGWPKDVD EQ+DV R+RKK EKD+E KV++ + LGP+ V +C LK N + +Y H ++ +E KGLAVFRDP +KR ++ ++WHP+ K+A +Y L FQD + ++A P S+VWD+++PN P+ L PL +R+NPK+ Sbjct: 48 MELAYLYVKARSSFG--LHCEFADTDAKVL---ESIPSTESDSDHIIRR-PMILKADTTPDMSEHEANTERQVTRNSSMRHMEGGWPKDVDPAEQSDVQRYRKKVEKDEEFKVSVVRSLGPI------------------VDKC------------------------------------LKQNNTIN--IYQSYFH----QFRPATTTEQPNAKGLAVFRDPELIKRTVSKIDWHPECPQKMAASYSILHFQDNKNANAKLPTYSYVWDVSNPNTPETTLRASCPLICMRYNPKS 277
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|813152166|ref|XP_012201219.1| (hypothetical protein SPRG_20232 [Saprolegnia parasitica CBS 223.65] >gi|641534113|gb|KDO28072.1| hypothetical protein SPRG_20232 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 152.14 bits (383), Expect = 9.043e-38 Identity = 98/297 (33.00%), Postives = 146/297 (49.16%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQE--YFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKA 294 ME+A+QY KPR TFG+ + AKVL A+P+ + +F ++++ P + T +++ H VNTE + KN+SMRHVEGGWPKDVD AE++D V R K+ D Y++ F+G E+ LK N G P+ +E + KGLAVFRDP S++R ++ ++WHP+ ++A Y L FQDP++ +A P +S++WD+ +PN P+V L P SPL LR+NPK+ Sbjct: 1 MELAYQYTKPRRTFGRHC--DFKHVEAKVLEAIPA---TDSFDHDYVKRRPMVARLDTTPDMSEHEVNTERLITKNSSMRHVEGGWPKDVD------------SAEQND------------VQRFRKKVEKDDEYKQAVKFLGPVAERG--------------------------------LKQNNTINIYQDYFAHMGEPA------TTEQPSAKGLAVFRDPESVRRTVSKIDWHPESPQRMAACYCILNFQDPKFVNARMPANSYIWDVLNPNTPEVVLKPLSPLCCLRYNPKS 230
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|1173955925|gb|OQS02825.1| (dynein [Thraustotheca clavata]) HSP 1 Score: 152.14 bits (383), Expect = 9.800e-38 Identity = 98/299 (32.78%), Postives = 145/299 (48.49%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQ--DVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQE--YFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKA 294 ME+A+QY KPR TFG+ D R T L S+P + +F + ++++ P + T +++ H VNTE + KN+SMRHVEGGWPKDVD AE++D V R K+ D Y++ F+G E+ LK N G P+ +E + KGLAVFRDP S++R ++ ++WHP+ ++A Y L FQDP++ +A P +S++WD+ +PN P+V L P SPL LR+NPK+ Sbjct: 1 MELAYQYTKPRRTFGRYCDFRYVEAKT-------LESIPATESFDNDYVKRRPMIARLDTTPDMSEHEVNTERLITKNSSMRHVEGGWPKDVD------------SAEQND------------VQRFRKKVEKDDEYKQAVKFLGPVAERA--------------------------------LKQNNTINIYQDYFAHMGEPA------TTEQPSAKGLAVFRDPESVRRTVSKIDWHPESPQRMAACYCILNFQDPKFMNARMPANSYIWDVMNPNTPEVVLKPLSPLCCLRYNPKS 230
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|1173937152|gb|OQR88001.1| (dynein-like protein [Achlya hypogyna]) HSP 1 Score: 151.369 bits (381), Expect = 2.123e-37 Identity = 97/297 (32.66%), Postives = 144/297 (48.48%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQE--YFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKA 294 ME+A+QY KPR TFG+ + AKVL ++P + F ++++ P + T +++ H VNTE + KN+SMRHVEGGWPKDVD AE++D V R K+ D Y++ F+G E+ LK N G P+ +E + KGLAVFRDP S++R ++ ++WHP+ ++A Y L FQDP++ +A P +S++WD+ +PN P+V L P SPL LR+NPK+ Sbjct: 1 MELAYQYTKPRRTFGRHC--DFKHVEAKVL---ETIPATDAFDHDYVKRRPMVARLDTTPDMSEHEVNTERLITKNSSMRHVEGGWPKDVD------------SAEQND------------VQRFRKKVEKDDEYKQAVKFLGPVAERG--------------------------------LKQNNTINIYQDYFAHMGEPA------TTEQPSAKGLAVFRDPESVRRTVSKIDWHPESPQRMAACYCILNFQDPKFMNARMPSNSYIWDVLNPNTPEVVLKPLSPLCCLRYNPKS 230
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|676398533|ref|XP_009042544.1| (hypothetical protein AURANDRAFT_34917 [Aureococcus anophagefferens] >gi|323446684|gb|EGB02757.1| hypothetical protein AURANDRAFT_34917 [Aureococcus anophagefferens]) HSP 1 Score: 150.984 bits (380), Expect = 2.542e-37 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECRE 145 MEVA+ Y K R+ FG+ VR +D ++L SV PS F F+ +NP + T ++ H NTE V+KN+S+RH+EGGWPKDVD E DV R+RKKAEKD++ K +K LGP+++RCM+QN TIDIY+EYF + R+ Sbjct: 1 MEVAYLYTKVRSDFGKQVR--FEDPETRILF---SVAPSDEFDKSFVLRNPSVATLDTSPHMSEHETNTERLVVKNSSIRHMEGGWPKDVDAAEPTDVNRYRKKAEKDEDYKTTMKNLGPIISRCMRQNNTIDIYEEYFSHDDRD 140 HSP 2 Score: 110.538 bits (275), Expect = 4.948e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0 Query: 212 TGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGL 298 + KGLAVFRDP+++KR S++WHP+G K+AV+Y L FQD R++SA P S++WDI +PN PD EL+PPSPL LRFNPK+ L Sbjct: 147 SAKGLAVFRDPNAMKRTATSIHWHPEGPTKIAVSYSILNFQDSRFTSARLPVQSYIWDIINPNTPDTELTPPSPLCCLRFNPKSTDTL 234
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|669154846|ref|XP_008612985.1| (hypothetical protein SDRG_08864 [Saprolegnia diclina VS20] >gi|530735520|gb|EQC33762.1| hypothetical protein SDRG_08864 [Saprolegnia diclina VS20]) HSP 1 Score: 150.984 bits (380), Expect = 2.784e-37 Identity = 98/297 (33.00%), Postives = 146/297 (49.16%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQE--YFVGECREKESGRDREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPSRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKA 294 ME+A+QY KPR TFG+ + AKVL A+P+ + +F ++++ P + T +++ H VNTE + KN+SMRHVEGGWPKDVD AE++D V R K+ D Y++ F+G E+ LK N G P+ +E + KGLAVFRDP S++R ++ ++WHP+ ++A Y L FQDP++ +A P +S++WD+ +PN P+V L P SPL LR+NPK+ Sbjct: 1 MELAYQYTKPRRTFGRHC--DFKHVEAKVLEAIPA---TDSFDHDYVKRRPMVGRLDTTPDMSEHEVNTERLITKNSSMRHVEGGWPKDVD------------SAEQND------------VQRFRKKVEKDDEYKQAVKFLGPVAERG--------------------------------LKQNNTINIYQDYFAHMGEPA------TTEQPSAKGLAVFRDPESVRRTVSKIDWHPESPQRMAACYCILNFQDPKFVNARMPANSYIWDVLNPNTPEVVLKPLSPLCCLRYNPKS 230
BLAST of EWM20624.1 vs. NCBI_GenBank
Match: gi|676381441|ref|XP_009033999.1| (hypothetical protein AURANDRAFT_21065 [Aureococcus anophagefferens] >gi|323455786|gb|EGB11654.1| hypothetical protein AURANDRAFT_21065 [Aureococcus anophagefferens]) HSP 1 Score: 150.599 bits (379), Expect = 3.913e-37 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 0 Query: 1 MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKNPCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVARFRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECRE 145 MEVA+ Y K R+ FG+ VR +D ++L SV PS F F+ +NP + T ++ H NTE V+KN+S+RH+EGGWPKDVD E DV R+RKKAEKD++ K +K LGP+++RCM+QN TIDIY+EYF + R+ Sbjct: 1 MEVAYLYTKVRSDFGKQVR--FEDPETRILF---SVAPSDEFDKSFVLRNPSVATLDTSPHMSEHETNTERLVVKNSSIRHMEGGWPKDVDAAEPTDVNRYRKKAEKDEDYKTTMKNLGPIISRCMRQNNTIDIYEEYFSRDDRD 140 HSP 2 Score: 110.153 bits (274), Expect = 5.759e-23 Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0 Query: 200 SRYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLGFQDPRWSSAS-PRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGL 298 SR ++ + E + KGLAVFRDP+++KR S++WHP+G K+AV+Y L FQD R++SA P S++WDI +PN PD EL+PPSPL LRFNPK+ L Sbjct: 135 SRDDRDWSGEPPSAKGLAVFRDPNAMKRTATSIHWHPEGPTKIAVSYSILNFQDSRFASARLPVQSYIWDIINPNTPDTELTPPSPLCCLRFNPKSTDTL 234 The following BLAST results are available for this feature:
BLAST of EWM20624.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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