rna10077, rna10077 (mRNA) Nannochloropsis gaditana

Overview
Namerna10077
Unique Namerna10077
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1244
Alignment locationKK037261.1:88308..89579 -

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Properties
Property NameValue
Productdynein-like protein
Orig transcript idgnl|cribi|Naga_100692g2.779.mrna
Orig protein idgnl|cribi|Naga_100692g2.779
GeneDIC
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:88308..89579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DICgene9779Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10077rna10077-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20624.1cds10046Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10077 ID=rna10077|Name=rna10077|organism=Nannochloropsis gaditana|type=mRNA|length=1244bp
CCAGGCCATGCTTTTGCGGCGCTTCGACTTCACCCTCCACGGGACCGTGG
AGGAGGTCGGCATGCGGACTGGCGCCACCATACATACAGAAGGTTTGGGG
GGGGGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGAATGGAAGG
AGGGAGTGATTACAGCTGGTCTAAAGTTGAGGCTTGTCGAAAGGATGTGA
TGATTGAGATTGGATATATGAGATAGAGAGTGGGAGAGGACAGCAGTATT
CGACGGGGAAGGGCTGTGCGGACGCTCCTTGCATACCCGGAGGTGTCCAT
CGGTCTCGGTGACCCCCGTTGAGCGGAAGAAGTGCTTTCCGCCACACCCT
CACGCGCACCATGTTATCCTTCGTCCCTCCTCCCTCCCTCCCTTTCTCCC
TCCCTCCCTCCCTCCGTCCCAGGCGGCCTTCGCATGACGGTCTCGAGGCG
GCAACCCGATCGCCACTCCCACGAGTCTACCTCCCTCCACCCCGTCCTTG
CCACCCGACTCTCGCCAGGAAGCGCGACGGCGGCATCCACGGTGGGGCTA
GGGCTGGAGGCAGGGGAGAAAGTGTTGAGGAAGCAGTCGGAGGGGGGGTG
TCCGGTAGCCCATTGAGGAGTAGGGATGTGGGGGAAGGAGGCAAGGAGAT
TGTTGGGAGCGGAGAGGCCATGTGGGAGGCAGCTGCTTGGGTAGAGAAGG
ATGTCTGTCATTGACTGTACAGTACACATAAGATAAGGAAAGATTAGAGC
GGGCAGAAAGGGAGCCTAGGAGGGCAAACTGGAGACAAGAAGACGACGAA
AATTGACAAACTGATGTGCTTAGATTTTGATAGGGAATGGCAGCGACCGA
GGAAGGAAAGGGAGGGCAGGAGGTGGGAGGCGGGGGGGATTAGGATGGAG
GACTGTCTTCTGTCGCCTTGGGTAGAGCGCGCGTCGGGGCCGTTGCGCCT
CCTCAGGGCACGTGAAGGATGATGCAATGAGGACCACCTTCATGTTCGTG
TCGGAGGTTGTCACTTGCGGGACCTTCCCCTCCGCAGTGGAAAGCAGGCC
AAGTGCGACGAGGGGGAATGGGGAGATGGTGATCCGGGGGGGCGCAGGGA
CGAGGCGCCAGTGAGGGGAAAAGGGCGCGAGGATGCGTGCGGAAGTATTG
ATGCTTAGCTTTGCTTTGTCCGAGTATTTTACATGCAATAAAGGAAAAAA
GAAGGTACAGACAAAGTGAATTGAAGGCGATGATCGAAAGAGCG
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protein sequence of rna10077

>rna10077-protein ID=rna10077-protein|Name=rna10077|organism=Nannochloropsis gaditana|type=polypeptide|length=352bp
MEVAFQYLKPRATFGQDVRQALQDTSAKVLLALPSVPPSPTFSSKFIRKN
PCSVGVSTCREIAAHVVNTETCVLKNASMRHVEGGWPKDVDHTEQADVAR
FRKKAEKDDECKVALKLLGPVVARCMKQNATIDIYQEYFVGECREKESGR
DREGVGADYVDQGSSSVGGGEISGPSGVFLKGGGGTNTTVGGAYLHGNPS
RYYQEHASESFTGKGLAVFRDPSSLKRPIASLNWHPDGQGKLAVAYYGLG
FQDPRWSSASPRSSFVWDINSPNRPDVELSPPSPLTSLRFNPKAQAGLEE
AGRGREWWARRLFWSIPTMTPSGMFSGSAARPVISASRSRPMVKCFGGIR
AT
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mRNA from alignment at KK037261.1:88308..89579-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10077 ID=rna10077|Name=rna10077|organism=Nannochloropsis gaditana|type=mRNA|length=1272bp|location=Sequence derived from alignment at KK037261.1:88308..89579- (Nannochloropsis gaditana)
ATGGAAGTGGCGTTCCAATATTTAAAGCCAAGGGCAACATTTGGGCAAGA
TGTTCGCCAAGCCCTGCAAGACACTTCAGCAAAAGTGCTCCTCGCATTGC
CCTCTGTCCCGCCTTCTCCAACTTTTTCGTCGAAATTTATTCGTAAAAAT
CCTTGTAGTGTTGGTGTGAGCACGTGTCGGGAGATAGCAGCTCATGTTGT
CAATACGGAGACATGTGTTTTGAAAAATGCAAGTATGAGGCACGTAGAGG
GCGGTTGGCCAAAAGACGTTGATCACACCGAACAAGCCGACGTGGCGCGC
TTCCGAAAGAAAGCGGAAAAAGATGATGAATGTAAGGTAGCATTGAAATT
GCTGGGTCCAGTGGTGGCGAGATGCATGAAACAGAATGCCACGATAGATA
TTTATCAGGAATACTTCGTGGGGGAATGCAGGGAAAAAGAGTCTGGGCGA
GACCGGGAGGGAGTCGGAGCCGACTATGTTGATCAAGGATCCTCTTCAGT
AGGTGGCGGAGAAATTTCGGGACCGTCGGGAGTATTTCTGAAAGGCGGGG
GTGGCACCAACACCACTGTGGGTGGTGCCTATCTCCACGGCAATCCCTCC
CGATATTACCAGGAGCATGCCTCCGAGTCTTTCACAGGTAAAGGGCTGGC
CGTCTTCCGCGATCCATCTTCTTTGAAACGGCCAATTGCTTCACTCAATT
GGCATCCTGACGGACAGGGCAAGCTCGCGGTCGCATACTATGGCCTCGGC
TTTCAGGACCCGCGGTGGAGCAGGTGAGGAGATAGGCGGAAGTGGAAAAG
AAGAGCCCCACGATAGCGTGCGTGATCACATCGGACACGCGCCATCTCTA
CTGCCACTTTCGACTCTGTGTGGAATGTCTGACCCTCCCATCGTCTTCTT
TCCGTGTCTATTGCTCTAGCGCCTCCCCGAGGTCTTCCTTCGTTTGGGAC
ATCAACAGCCCCAATAGGCCCGATGTGGAGCTCTCGCCCCCCTCCCCGCT
CACCTCCCTCCGCTTCAACCCCAAGGTACCGGACACCCTCCTCGGGGGCT
GTCAGAACGGCCTGGTTTGCGTGTTTGACCTGCGCAAGCAAGGCTCAGGC
GGGGCTGGAGGAAGCGGGGCGGGGCAGGGAGTGGTGGGCGAGGCGTCTCT
TCTGGAGCATTCCCACCATGACCCCGTCCGGGATGTTTTCTGGATCAGCA
GCAAGACCGGTCATCAGTGCGTCTCGATCTCGACCGATGGTCAAATGCTT
TGGTGGGATACGCGCCACCTAA
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Coding sequence (CDS) from alignment at KK037261.1:88308..89579-

>rna10077 ID=rna10077|Name=rna10077|organism=Nannochloropsis gaditana|type=CDS|length=3177bp|location=Sequence derived from alignment at KK037261.1:88308..89579- (Nannochloropsis gaditana)
GCTCAGGCGGGGCTGGAGGAAGCGGGGCGGGGCAGGGAGTGGTGGGCGAG
GCGTCTCTTCTGGAGCATTCCCACCATGACCCCGTCCGGGATGTTTTCTG
GATCAGCAGCAAGACCGGTCATCAGTGCGTCTCGATCTCGACCGATGGTC
AAATGCTTTGGTGGGATACGCGCCACCTAACGCCTCCCCGAGGTCTTCCT
TCGTTTGGGACATCAACAGCCCCAATAGGCCCGATGTGGAGCTCTCGCCC
CCCTCCCCGCTCACCTCCCTCCGCTTCAACCCCAAGATGGAAGTGGCGTT
CCAATATTTAAAGCCAAGGGCAACATTTGGGCAAGATGTTCGCCAAGCCC
TGCAAGACACTTCAGCAAAAGTGCTCCTCGCATTGCCCTCTGTCCCGCCT
TCTCCAACTTTTTCGTCGAAATTTATTCGTAAAAATCCTTGTAGTGTTGG
TGTGAGCACGTGTCGGGAGATAGCAGCTCATGTTGTCAATACGGAGACAT
GTGTTTTGAAAAATGCAAGTATGAGGCACGTAGAGGGCGGTTGGCCAAAA
GACGTTGATCACACCGAACAAGCCGACGTGGCGCGCTTCCGAAAGAAAGC
GGAAAAAGATGATGAATGTAAGGTAGCATTGAAATTGCTGGGTCCAGTGG
TGGCGAGATGCATGAAACAGAATGCCACGATAGATATTTATCAGGAATAC
TTCGTGGGGGAATGCAGGGAAAAAGAGTCTGGGCGAGACCGGGAGGGAGT
CGGAGCCGACTATGTTGATCAAGGATCCTCTTCAGTAGGTGGCGGAGAAA
TTTCGGGACCGTCGGGAGTATTTCTGAAAGGCGGGGGTGGCACCAACACC
ACTGTGGGTGGTGCCTATCTCCACGGCAATCCCTCCCGATATTACCAGGA
GCATGCCTCCGAGTCTTTCACAGGTAAAGGGCTGGCCGTCTTCCGCGATC
CATCTTCTTTGAAACGGCCAATTGCTTCACTCAATTGGCATCCTGACGGA
CAGGGCAAGCTCGCGGTCGCATACTATGGCCTCGGCTTTCAGGACCCGCG
GTGGAGCAGGCTCAGGCGGGGCTGGAGGAAGCGGGGCGGGGCAGGGAGTG
GTGGGCGAGGCGTCTCTTCTGGAGCATTCCCACCATGACCCCGTCCGGGA
TGTTTTCTGGATCAGCAGCAAGACCGGTCATCAGTGCGTCTCGATCTCGA
CCGATGGTCAAATGCTTTGGTGGGATACGCGCCACCTAACGCCTCCCCGA
GGTCTTCCTTCGTTTGGGACATCAACAGCCCCAATAGGCCCGATGTGGAG
CTCTCGCCCCCCTCCCCGCTCACCTCCCTCCGCTTCAACCCCAAGATGGA
AGTGGCGTTCCAATATTTAAAGCCAAGGGCAACATTTGGGCAAGATGTTC
GCCAAGCCCTGCAAGACACTTCAGCAAAAGTGCTCCTCGCATTGCCCTCT
GTCCCGCCTTCTCCAACTTTTTCGTCGAAATTTATTCGTAAAAATCCTTG
TAGTGTTGGTGTGAGCACGTGTCGGGAGATAGCAGCTCATGTTGTCAATA
CGGAGACATGTGTTTTGAAAAATGCAAGTATGAGGCACGTAGAGGGCGGT
TGGCCAAAAGACGTTGATCACACCGAACAAGCCGACGTGGCGCGCTTCCG
AAAGAAAGCGGAAAAAGATGATGAATGTAAGGTAGCATTGAAATTGCTGG
GTCCAGTGGTGGCGAGATGCATGAAACAGAATGCCACGATAGATATTTAT
CAGGAATACTTCGTGGGGGAATGCAGGGAAAAAGAGTCTGGGCGAGACCG
GGAGGGAGTCGGAGCCGACTATGTTGATCAAGGATCCTCTTCAGTAGGTG
GCGGAGAAATTTCGGGACCGTCGGGAGTATTTCTGAAAGGCGGGGGTGGC
ACCAACACCACTGTGGGTGGTGCCTATCTCCACGGCAATCCCTCCCGATA
TTACCAGGAGCATGCCTCCGAGTCTTTCACAGGTAAAGGGCTGGCCGTCT
TCCGCGATCCATCTTCTTTGAAACGGCCAATTGCTTCACTCAATTGGCAT
CCTGACGGACAGGGCAAGCTCGCGGTCGCATACTATGGCCTCGGCTTTCA
GGACCCGCGGTGGAGCAGGCTCAGGCGGGGCTGGAGGAAGCGGGGCGGGG
CAGGGAGTGGTGGGCGAGGCGTCTCTTCTGGAGCATTCCCACCATGACCC
CGTCCGGGATGTTTTCTGGATCAGCAGCAAGACCGGTCATCAGTGCGTCT
CGATCTCGACCGATGGTCAAATGCTTTGGTGGGATACGCGCCACCTAACG
CCTCCCCGAGGTCTTCCTTCGTTTGGGACATCAACAGCCCCAATAGGCCC
GATGTGGAGCTCTCGCCCCCCTCCCCGCTCACCTCCCTCCGCTTCAACCC
CAAGATGGAAGTGGCGTTCCAATATTTAAAGCCAAGGGCAACATTTGGGC
AAGATGTTCGCCAAGCCCTGCAAGACACTTCAGCAAAAGTGCTCCTCGCA
TTGCCCTCTGTCCCGCCTTCTCCAACTTTTTCGTCGAAATTTATTCGTAA
AAATCCTTGTAGTGTTGGTGTGAGCACGTGTCGGGAGATAGCAGCTCATG
TTGTCAATACGGAGACATGTGTTTTGAAAAATGCAAGTATGAGGCACGTA
GAGGGCGGTTGGCCAAAAGACGTTGATCACACCGAACAAGCCGACGTGGC
GCGCTTCCGAAAGAAAGCGGAAAAAGATGATGAATGTAAGGTAGCATTGA
AATTGCTGGGTCCAGTGGTGGCGAGATGCATGAAACAGAATGCCACGATA
GATATTTATCAGGAATACTTCGTGGGGGAATGCAGGGAAAAAGAGTCTGG
GCGAGACCGGGAGGGAGTCGGAGCCGACTATGTTGATCAAGGATCCTCTT
CAGTAGGTGGCGGAGAAATTTCGGGACCGTCGGGAGTATTTCTGAAAGGC
GGGGGTGGCACCAACACCACTGTGGGTGGTGCCTATCTCCACGGCAATCC
CTCCCGATATTACCAGGAGCATGCCTCCGAGTCTTTCACAGGTAAAGGGC
TGGCCGTCTTCCGCGATCCATCTTCTTTGAAACGGCCAATTGCTTCACTC
AATTGGCATCCTGACGGACAGGGCAAGCTCGCGGTCGCATACTATGGCCT
CGGCTTTCAGGACCCGCGGTGGAGCAG
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Synonyms
Publications