EWM20645.1, cds10031 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|585100443|gb|EWM20645.1| (thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 404.445 bits (1038), Expect = 6.793e-143 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MAPPGRRRLVILLRLIMGALVSLATCQAFLGFSYSSQRIATPGSTALRMHQLQPLLNTPLRFGCGSRRVLRLFAGEKGGEEDALIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ 195 MAPPGRRRLVILLRLIMGALVSLATCQAFLGFSYSSQRIATPGSTALRMHQLQPLLNTPLRFGCGSRRVLRLFAGEKGGEEDALIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ Sbjct: 1 MAPPGRRRLVILLRLIMGALVSLATCQAFLGFSYSSQRIATPGSTALRMHQLQPLLNTPLRFGCGSRRVLRLFAGEKGGEEDALIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ 195
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|553189771|ref|XP_005855071.1| (thioredoxin, partial [Nannochloropsis gaditana CCMP526] >gi|422293994|gb|EKU21294.1| thioredoxin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 232.261 bits (591), Expect = 5.756e-76 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 87 DIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ 195 DIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ Sbjct: 1 DIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFGVSIKKLNGLLERLDKYKKMQ 109
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|918997848|ref|XP_013394301.1| (PREDICTED: thioredoxin-like [Lingula anatina]) HSP 1 Score: 65.4698 bits (158), Expect = 1.578e-10 Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 0 Query: 88 IATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSK---VEDFGVSIKKLNGLLE 186 + LEE +AA+ + K LV+ F+A WC CK+ AP ++ Y++ D V+V DI ++ +P H Y G + E G S +KL GL + Sbjct: 4 LNNLEEFKAAVAATSNGKILVIDFYAEWCGPCKKIAPCLEKLAEKYKDKADVYKVNVDDADDIAAHCKISAMPTFHVYKNGKEEKACELVGASEEKLKGLFD 105
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|926520643|ref|XP_013809439.1| (PREDICTED: thioredoxin [Apteryx australis mantelli]) HSP 1 Score: 62.3882 bits (150), Expect = 1.631e-9 Identity = 32/106 (30.19%), Postives = 56/106 (52.83%), Query Frame = 0 Query: 84 LIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDF-GVSIKKLNGLLERL 188 ++ + L E EA ++++G K +V+ F A+WC CK P + + E F+++DV +D+ M + +P FY G KV++F G + +KL +E L Sbjct: 1 MVKSVGNLSEFEAELKSAGE-KLVVIDFSATWCGPCKTIKPFFHSLCEKFGEVV-FIEIDVDDAQDVAMHCDVKCMPTFQFYKNGKKVQEFSGANREKLEETIESL 104
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|1041128773|ref|XP_017288669.1| (PREDICTED: thioredoxin [Kryptolebias marmoratus]) HSP 1 Score: 62.3882 bits (150), Expect = 1.689e-9 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 0 Query: 84 LIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDFG 175 ++ I E +A + ++G + +V+ F ASWC CK AP +QQ Y++ F+ VDV D+ A G++ +P FY G KV +F Sbjct: 1 MVRHINNKSEFDAILASAGD-QLVVVDFTASWCGPCKGIAPYFQQLSEEYKDKVIFLKVDVDEASDVSQACGISCMPTFQFYKNGQKVHEFS 91
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|1062154300|gb|ODO00912.1| (thioredoxin [Cryptococcus depauperatus CBS 7855]) HSP 1 Score: 65.855 bits (159), Expect = 2.914e-9 Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = 0 Query: 62 FGCGSRRVLRLFAGEKGGEEDALIGDIATLEELE---AAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDF-GVSIKKLNGLLER 187 FG + R ++ E+ E ++ + EE E +++ T+ LV+ FHASWC C AP +Q N Y ++ FV +DV +R++ +T +P F GG +VE G S +LN ++ R Sbjct: 72 FGSVAARPGIMWTSEERAERRRVVDERLKAEEKEQFDGIVRSLPPTQLLVVDFHASWCGPCHAIAPVVEQLANTY-KHAKFVKIDVDRQRELASRFKITAMPTFKFLKGGREVETLRGASPPQLNSIVSR 200
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|391358072|gb|AFM43654.1| (thioredoxin 1 [Mytilus galloprovincialis]) HSP 1 Score: 61.6178 bits (148), Expect = 4.238e-9 Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 0 Query: 88 IATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFVDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDF-GVSIKKLNGLLER 187 I + E + ++ SG T +V+ F A+WC C + AP +Q+ + Y + F+ VDV D+ G++ +P Y G+KV++ G S +KL G++E+ Sbjct: 5 IGSKAEFDGVVKGSGDT-LIVVDFFATWCGPCVQIAPVYQKLSDEYSDCI-FLKVDVDEVEDVAAESGISAMPTFQCYKNGNKVDEIVGASEEKLRGMIEK 103
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|297325368|gb|EFH55788.1| (hypothetical protein ARALYDRAFT_482466 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 63.5438 bits (153), Expect = 4.524e-9 Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0 Query: 71 RLFAGEKGGEEDALIGDIATLEELEAAI-QTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDF-VDVDVTGKRDIIMAMGLTVLPHSHFYVGGSKV-EDFGVSIKKLNGLLERLDK 190 R F E GGE +I + + EE A+ + + P + F A+WC C+ +P + Y + + VD+D G + I + +T +P HF+ GGSK E G + KL L+E+L K Sbjct: 74 RSFGSEAGGENGVVI--VKSEEEFINAMGKAQDGSLPSIFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEDGISNTISKLNITSVPTLHFFKGGSKKGEVVGADVTKLKNLMEQLYK 194
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|58331956|ref|NP_001011127.1| (thioredoxin [Xenopus tropicalis] >gi|54038274|gb|AAH84527.1| hypothetical LOC496541 [Xenopus tropicalis]) HSP 1 Score: 61.2326 bits (147), Expect = 5.118e-9 Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 0 Query: 84 LIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFDFV--DVDVTGKRDIIMAMGLTVLPHSHFYVGGSKVEDF-GVSIKKLNGLLERL 188 ++ +A++EE + A++ +G K +V+ F A WC C+R AP +++ E+ D V VDV D+ G++ +P F+ G +VE F G IKKL ++RL Sbjct: 1 MVKYLASVEEYQCALKDAGE-KLVVIDFTAKWCGPCQRIAPDFEKLST---EFPDIVLYKVDVDDASDVAQVCGISSMPTFIFFKSGKQVERFSGADIKKLKETIKRL 104
BLAST of EWM20645.1 vs. NCBI_GenBank
Match: gi|303271529|ref|XP_003055126.1| (hypothetical protein MICPUCDRAFT_24412 [Micromonas pusilla CCMP1545] >gi|226463100|gb|EEH60378.1| hypothetical protein MICPUCDRAFT_24412 [Micromonas pusilla CCMP1545]) HSP 1 Score: 62.003 bits (149), Expect = 5.937e-9 Identity = 38/113 (33.63%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 82 DALIGDIATLEELEAAIQTSGTTKPLVLRFHASWCSACKRFAPTWQQTVNAYEEYFD--FVDVDVTGKRDIIMAMGLTVLPHSHFYVGGS-KVEDFGVSIKKLNGLLERLDKY 191 D +I D+ EE A++ +G + +++ F+A WC AC+ P + + + EE D FV V+ +++ +MG+ +LP HFY G KVE+F SI K+ L E+++K+ Sbjct: 20 DNMI-DVNGTEEFLQALKEAGD-RLVIVDFYARWCGACRGLFPKLCK-IASQEENKDILFVKVEFDDNKEMCRSMGVKILPFFHFYKGKEGKVEEFSASISKIKLLREKIEKH 129 The following BLAST results are available for this feature:
BLAST of EWM20645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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