|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100760g2.4052.mrna |
| Orig protein id | gnl|cribi|Naga_100760g2.4052 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:34780..35833 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10026 ID=rna10026|Name=rna10026|organism=Nannochloropsis gaditana|type=mRNA|length=258bp
ATGCTTGACCTTTGCAAGCGGCTGCGCCAGGAAACCATCATAGAGAGTAT
TAGAAGTAGCTTTCTTGGGCTAGTGGACCCCTGGAAACAAGAGAATAAAA
CGAGGTCGAATATAGCGCCTCCTCTATCATGTACTCTACTATCATATAAG
TCGGAAATGTACTTCCGGCGTGATCGTGTCATTGCGGTAATTCAGGCGTC
GATTTTGGACAGGAGAGACAACACGCGTCTACTTGAGCACGGCAGTAAAC
GGGAATAA back to topprotein sequence of rna10026 >rna10026-protein ID=rna10026-protein|Name=rna10026|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MSTGKNSPATKEEKITVSAAEMHGSFQSKLTATASPFIQRESQQSNMQSL
GDSDLKRMVETAVRNRDVALLAAHCKMLSGRPGLASLQKNIQVHLERLQA
EDLGIPLSSDIRGRAAKDEEPPRQLSNSLEGFPNCFLSSSVNLPASGIGQ
TDTPHSVALTLVPEVLEYLNAKNNDKSRLQDILQKSGCRM back to topmRNA from alignment at KK037260.1:34780..35833- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10026 ID=rna10026|Name=rna10026|organism=Nannochloropsis gaditana|type=mRNA|length=1054bp|location=Sequence derived from alignment at KK037260.1:34780..35833- (Nannochloropsis gaditana)
ATGAGTACTGGGAAGAATTCGCCTGCGACAAAGGAGGAGAAAATCACGGT
CTCAGCGGCCGAGATGCACGGCTCGTTTCAGTCGAAATTAACTGCCACAG
CTTCACCCTTTATTCAACGAGAATCTCAACAGTCAAATATGCAAAGTCTA
GGTATGTTAAGAAAGAAGGGAGAAGAGGTTATGGGGATTGGTCATGAGGA
CTGAAGTAAGCGGGGGGGTAAAACAGGAACAGGCACACAGGCTTGTTGTC
CAATTCTTACCGCAAAAAGATGGAGGACACCGACCTCCACTTCTTCTGAT
CTCTCCTCACACAATTAACAGGAGACTCTGATTTGAAAAGGATGGTGGAG
ACGGCAGTGCGTAACCGCGATGTTGCTCTTCTTGCCGCCCATTGCAAGGT
GGGGTGATGGGCCGTGTGCGCCTGCTCATTTTCCCCCTCTTTTCAGTCTT
ACACTCCTTGTCTGTTCTAACAAGCGTGCGTTTGAAAGCCCACTTTTAAA
TATTCTGGCAGGTCGGATTGTCGTATCGTTTGACTGCTATTCAGTATGAA
TCTTTTCCTAACTGCCCGTGTACCCCCCCGTCCCCCTCTTCCCGATTCAT
CAGATGCTCAGCGGCCGACCAGGCCTTGCCTCCTTACAGAAGAATATCCA
AGTCCACTTGGAGCGCTTGCAGGCTGAAGACTTGGGGATTCCCCTCTCCA
GCGACATCAGAGGCAGGGCTGCGAAAGATGAAGAGCCTCCACGTCAGCTT
TCGAACTCGCTTGAAGGTTTCCCAAACTGCTTTCTCTCGTCCTCAGTGAA
CCTTCCTGCATCCGGCATTGGCCAGACTGACACTCCCGTAAGTCTACATC
CTTCCGTGTTCTTTCCCATTTTCCCTCTCCATCCCCCGCTTCCTGTGACT
TATCTTTTTCTGTCTCGGATCGCTCATGTCATTCCTTCTGTAGCACTCTG
TCGCGCTCACGCTGGTGCCCGAGGTGCTCGAGTATTTAAATGCCAAGAAC
AACGACAAGTCACGCCTCCAGGACATCCTGCAGAAGTCTGGGTGTCGCAT
GTAG back to topCoding sequence (CDS) from alignment at KK037260.1:34780..35833- >rna10026 ID=rna10026|Name=rna10026|organism=Nannochloropsis gaditana|type=CDS|length=2292bp|location=Sequence derived from alignment at KK037260.1:34780..35833- (Nannochloropsis gaditana)
CACTCTGTCGCGCTCACGCTGGTGCCCGAGGTGCTCGAGTATTTAAATGC
CAAGAACAACGACAAGTCACGCCTCCAGGACATCCTGCAGAAGTCTGGGT
GTCGCATGTAGATGCTCAGCGGCCGACCAGGCCTTGCCTCCTTACAGAAG
AATATCCAAGTCCACTTGGAGCGCTTGCAGGCTGAAGACTTGGGGATTCC
CCTCTCCAGCGACATCAGAGGCAGGGCTGCGAAAGATGAAGAGCCTCCAC
GTCAGCTTTCGAACTCGCTTGAAGGTTTCCCAAACTGCTTTCTCTCGTCC
TCAGTGAACCTTCCTGCATCCGGCATTGGCCAGACTGACACTCCCGAGAC
TCTGATTTGAAAAGGATGGTGGAGACGGCAGTGCGTAACCGCGATGTTGC
TCTTCTTGCCGCCCATTGCAAGATGAGTACTGGGAAGAATTCGCCTGCGA
CAAAGGAGGAGAAAATCACGGTCTCAGCGGCCGAGATGCACGGCTCGTTT
CAGTCGAAATTAACTGCCACAGCTTCACCCTTTATTCAACGAGAATCTCA
ACAGTCAAATATGCAAAGTCTAGCACTCTGTCGCGCTCACGCTGGTGCCC
GAGGTGCTCGAGTATTTAAATGCCAAGAACAACGACAAGTCACGCCTCCA
GGACATCCTGCAGAAGTCTGGGTGTCGCATGTAGATGCTCAGCGGCCGAC
CAGGCCTTGCCTCCTTACAGAAGAATATCCAAGTCCACTTGGAGCGCTTG
CAGGCTGAAGACTTGGGGATTCCCCTCTCCAGCGACATCAGAGGCAGGGC
TGCGAAAGATGAAGAGCCTCCACGTCAGCTTTCGAACTCGCTTGAAGGTT
TCCCAAACTGCTTTCTCTCGTCCTCAGTGAACCTTCCTGCATCCGGCATT
GGCCAGACTGACACTCCCGAGACTCTGATTTGAAAAGGATGGTGGAGACG
GCAGTGCGTAACCGCGATGTTGCTCTTCTTGCCGCCCATTGCAAGATGAG
TACTGGGAAGAATTCGCCTGCGACAAAGGAGGAGAAAATCACGGTCTCAG
CGGCCGAGATGCACGGCTCGTTTCAGTCGAAATTAACTGCCACAGCTTCA
CCCTTTATTCAACGAGAATCTCAACAGTCAAATATGCAAAGTCTAGCACT
CTGTCGCGCTCACGCTGGTGCCCGAGGTGCTCGAGTATTTAAATGCCAAG
AACAACGACAAGTCACGCCTCCAGGACATCCTGCAGAAGTCTGGGTGTCG
CATGTAGATGCTCAGCGGCCGACCAGGCCTTGCCTCCTTACAGAAGAATA
TCCAAGTCCACTTGGAGCGCTTGCAGGCTGAAGACTTGGGGATTCCCCTC
TCCAGCGACATCAGAGGCAGGGCTGCGAAAGATGAAGAGCCTCCACGTCA
GCTTTCGAACTCGCTTGAAGGTTTCCCAAACTGCTTTCTCTCGTCCTCAG
TGAACCTTCCTGCATCCGGCATTGGCCAGACTGACACTCCCGAGACTCTG
ATTTGAAAAGGATGGTGGAGACGGCAGTGCGTAACCGCGATGTTGCTCTT
CTTGCCGCCCATTGCAAGATGAGTACTGGGAAGAATTCGCCTGCGACAAA
GGAGGAGAAAATCACGGTCTCAGCGGCCGAGATGCACGGCTCGTTTCAGT
CGAAATTAACTGCCACAGCTTCACCCTTTATTCAACGAGAATCTCAACAG
TCAAATATGCAAAGTCTAGCACTCTGTCGCGCTCACGCTGGTGCCCGAGG
TGCTCGAGTATTTAAATGCCAAGAACAACGACAAGTCACGCCTCCAGGAC
ATCCTGCAGAAGTCTGGGTGTCGCATGTAGATGCTCAGCGGCCGACCAGG
CCTTGCCTCCTTACAGAAGAATATCCAAGTCCACTTGGAGCGCTTGCAGG
CTGAAGACTTGGGGATTCCCCTCTCCAGCGACATCAGAGGCAGGGCTGCG
AAAGATGAAGAGCCTCCACGTCAGCTTTCGAACTCGCTTGAAGGTTTCCC
AAACTGCTTTCTCTCGTCCTCAGTGAACCTTCCTGCATCCGGCATTGGCC
AGACTGACACTCCCGAGACTCTGATTTGAAAAGGATGGTGGAGACGGCAG
TGCGTAACCGCGATGTTGCTCTTCTTGCCGCCCATTGCAAGATGAGTACT
GGGAAGAATTCGCCTGCGACAAAGGAGGAGAAAATCACGGTCTCAGCGGC
CGAGATGCACGGCTCGTTTCAGTCGAAATTAACTGCCACAGCTTCACCCT
TTATTCAACGAGAATCTCAACAGTCAAATATGCAAAGTCTAG back to top
|