EWM20700.1, cds9974 (CDS) Nannochloropsis gaditana

Overview
NameEWM20700.1
Unique Namecds9974
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:106089..107141 -
Alignment locationKK037259.1:105751..105822 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20700.1
Productferritin
Orig transcript idgnl|cribi|Naga_100833g2.4292.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:106089..107141 -
KK037259.1supercontigKK037259.1:105751..105822 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0008152metabolic process
GO:0019725cellular homeostasis
GO:0006879cellular iron ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0008199ferric iron binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005623cell
Vocabulary: INTERPRO
TermDefinition
IPR009078Ferritin-like_SF
IPR009040Ferritin-like_diiron
IPR008331Ferritin_DPS_dom
IPR012347Ferritin-rel
Homology
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|585100528|gb|EWM20700.1| (ferritin [Nannochloropsis gaditana])

HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MSDNNGDCKSRGLFLWKVTLRCECLNVIIQVVNLLVLLLKTLVRTPGNAHVRATDSRLLYIFSIFVLISTTLSNADALISSSMWCASSTAISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 374
            MSDNNGDCKSRGLFLWKVTLRCECLNVIIQVVNLLVLLLKTLVRTPGNAHVRATDSRLLYIFSIFVLISTTLSNADALISSSMWCASSTAISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH
Sbjct:    1 MSDNNGDCKSRGLFLWKVTLRCECLNVIIQVVNLLVLLLKTLVRTPGNAHVRATDSRLLYIFSIFVLISTTLSNADALISSSMWCASSTAISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 374          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|553187916|ref|XP_005854706.1| (ferroxidase, partial [Nannochloropsis gaditana CCMP526] >gi|422294355|gb|EKU21655.1| ferroxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 588.186 bits (1515), Expect = 0.000e+0
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query:   91 ISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 374
            ISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH
Sbjct:    1 ISRRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 284          

HSP 2 Score: 84.3445 bits (207), Expect = 6.985e-15
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   40 KTLVRTPGNAHVRATD---SRLLYIFSIFVLISTTLSNADALISSSMWCASSTAISRRIFR 97
            + + RT GNA VRATD   SRLLYI+SIFVLI TT SNADALISSSMW  SSTAISRRIF+
Sbjct:    3 RRIFRTSGNARVRATDLGKSRLLYIWSIFVLILTTSSNADALISSSMWRGSSTAISRRIFK 63          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1026961007|ref|XP_016611134.1| (hypothetical protein SPPG_08992 [Spizellomyces punctatus DAOM BR117] >gi|907097623|gb|KND03095.1| hypothetical protein SPPG_08992 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 75.485 bits (184), Expect = 1.200e-12
Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  147 ISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRR 210
            IS +I   L  Q NRE  NS  Y + S WF   ELPGSA WCKTQ+ EER H LKI +H+  RR
Sbjct:    5 ISNKILNGLIQQANRELSNSNAYLSMSLWFQDRELPGSAQWCKTQSDEERMHGLKIFDHIVKRR 68          

HSP 2 Score: 68.1662 bits (165), Expect = 4.090e-10
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0
Query:  283 GPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 374
            G    ++ DP+ IW KALEQE+ NS  I  ++  ARE  DY T++ L  +Y+ EQL EE +V+++L N   V       Y   D  +  KPH
Sbjct:   78 GQQKFSYDDPLQIWEKALEQEQLNSVAIMDLVRQAREEGDYTTDTFL-QWYVAEQLNEETSVKDILENAKRVAATTG-LYVTFDSQITRKPH 167          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|219129140|ref|XP_002184754.1| (ferritin [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403863|gb|EEC43813.1| ferritin [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 73.1738 bits (178), Expect = 8.638e-12
Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  154 LLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSE--WETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTF 269
            LL +Q NRE + S  Y A   WF +++ PGSASWC+T + EER HA+KI +HL+ R+ E  ++ S+        E+ QN R +        +  + S+   ++ K+  E +   S+ F
Sbjct:    4 LLVNQANRELDASRMYLAMDMWFRFHDFPGSASWCQTHSVEERSHAMKIFDHLALRQTEKVLSVSQEVLSDHGMEKFQNNRVSEVWKKALDQEVQNSQEYFNMAKVAEEESDYVSREF 121          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1084935228|gb|OGR52627.1| (hypothetical protein A2049_05680 [Elusimicrobia bacterium GWA2_62_23])

HSP 1 Score: 70.8626 bits (172), Expect = 5.620e-11
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
Query:  148 SRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRR 210
            ++++  LLN Q N EF NS  Y A + WF+   LPG ASW + QA EERGHA+K   HL  RR
Sbjct:    4 NKKMEALLNKQMNAEFYNSHLYQAMAGWFEGQNLPGFASWMEIQAGEERGHAMKFYNHLKERR 66          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1084920794|gb|OGR39396.1| (hypothetical protein A2X29_02735 [Elusimicrobia bacterium GWA2_64_40] >gi|1084949524|gb|OGR65190.1| hypothetical protein A2X30_01890 [Elusimicrobia bacterium GWB2_63_16])

HSP 1 Score: 69.3218 bits (168), Expect = 1.663e-10
Identity = 57/207 (27.54%), Postives = 84/207 (40.58%), Query Frame = 0
Query:  148 SRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLV 354
            ++++  LLN Q N EF NS  Y A + WF+   LPG A W + QA+EER HALK   HL  R                      RG    G VP                   A P K K+          LD               ++ A + E + S++I ++M AA   +DY    +L  ++I EQ+ EE + + +L    ++
Sbjct:    4 NKKMEALLNKQMNAEFYNSHLYQAMAGWFESQNLPGFAGWLEVQAEEERKHALKFYSHLKER----------------------RGAILVGPVP-------------------AVPTKYKS---------ALDA--------------FQAAYDHEVHVSQEINKLMDAALADKDYAMAKML-DWFITEQVEEEASTDAILQQLKMI 145          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1085055916|gb|OGS56498.1| (ferritin [Elusimicrobia bacterium RIFOXYB2_FULL_62_6])

HSP 1 Score: 69.3218 bits (168), Expect = 1.710e-10
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  147 ISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRR 210
            IS+++ ++LN Q N EF NS  Y A + WF+   LPG A W + QA EERGHA++   H+  RR
Sbjct:    2 ISKKMEEILNKQMNAEFYNSSLYLAMAAWFEGQNLPGLAHWMEVQAGEERGHAMRFYNHIKERR 65          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1026961057|ref|XP_016611150.1| (hypothetical protein SPPG_08997 [Spizellomyces punctatus DAOM BR117] >gi|907097639|gb|KND03111.1| hypothetical protein SPPG_08997 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 67.781 bits (164), Expect = 3.772e-10
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0
Query:  283 GPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSKPH 374
            G    ++ DP+ IW KALEQE+ NS  I  ++  ARE  DY T++ L  +Y+ EQL EE +V+++L N   V       Y   D  +  KPH
Sbjct:   49 GQQKFSYDDPLQIWEKALEQEQLNSVAIMDLVRQAREEGDYTTDTFL-QWYVAEQLNEETSVKDILENAKRVAATTG-LYVTFDSQITRKPH 138          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|504264222|ref|WP_014451324.1| (ferritin [Fervidobacterium pennivorans] >gi|383109278|gb|AFG34881.1| ferritin-like protein [Fervidobacterium pennivorans DSM 9078])

HSP 1 Score: 67.781 bits (164), Expect = 5.929e-10
Identity = 62/226 (27.43%), Postives = 95/226 (42.04%), Query Frame = 0
Query:  147 ISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSLPSK 372
            +S ++FK LN+Q  +E  ++  Y + + +FD  +LPG A W K QA+EE  HA+KI + L  R       GS  E      L  +    SN   P E+ EA                                                   A E E+  ++ I  I+  AR+ +DY TE  L +++I EQ+ EE+A  +++   L  ++  P   Y LDR L S+
Sbjct:    1 MSEKVFKALNEQVGKEIFSAYLYLSMATYFDAIDLPGFAKWMKMQAKEELEHAMKIYDFLYER-------GSRVE------LPALEKPKSNWKSPLEAFEA---------------------------------------------------AYEHEKSITKSINNILEIARKEKDYATEQFL-AWFIKEQV-EEEAQTDLIVRKLKKLQDSPTGLYMLDRELGSR 160          
BLAST of EWM20700.1 vs. NCBI_GenBank
Match: gi|1057305887|ref|WP_068667274.1| (ferritin [Thermococcus piezophilus] >gi|1029173242|gb|ANF23527.1| ferritin [Thermococcus piezophilus])

HSP 1 Score: 67.781 bits (164), Expect = 7.892e-10
Identity = 59/223 (26.46%), Postives = 94/223 (42.15%), Query Frame = 0
Query:  147 ISRRIFKLLNDQGNREFENSLTYTAFSHWFDYNELPGSASWCKTQAQEERGHALKILEHLSSRRIEDDVTGSEWETQEAERLQNVRGTNSNGDVPTESSEASEREPDLGKLRSEAAPQKSKTFHWEQVPNIVLDVKGPFTTTFSDPIAIWRKALEQERYNSRKIFQIMAAARETQDYVTESLLMSYYIPEQLGEEKAVEEVLSNTLLVMKRGPEFYYELDRSL 369
            +S R+ K LN+Q NRE  ++  Y A   +FD   L G ASW K QA+EE GHAL+   ++  R                           NG V  ++ E   +E                   WE                   P+A +  A + E++ S+ I ++   A E +DY T + L  ++I EQ+ EE +V++++ + L   K  P+  + LD+ L
Sbjct:    2 LSERMLKALNEQLNRELYSAYLYFAMGAYFDDLNLEGFASWMKAQAEEELGHALRFYNYIYDR---------------------------NGRVELKAIEQPPKE-------------------WE------------------SPLAAFEAAYKHEQFISKCINELATLAEEEKDYSTRAFL-EWFINEQVEEEASVKKIV-DKLKFTKDNPQVLFMLDQEL 158          
The following BLAST results are available for this feature:
BLAST of EWM20700.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100528|gb|EWM20700.1|0.000e+0100.00ferritin [Nannochloropsis gaditana][more]
gi|553187916|ref|XP_005854706.1|6.985e-15100.00ferroxidase, partial [Nannochloropsis gaditana CCM... [more]
gi|1026961007|ref|XP_016611134.1|1.200e-1254.69hypothetical protein SPPG_08992 [Spizellomyces pun... [more]
gi|219129140|ref|XP_002184754.1|8.638e-1233.90ferritin [Phaeodactylum tricornutum CCAP 1055/1] >... [more]
gi|1084935228|gb|OGR52627.1|5.620e-1150.79hypothetical protein A2049_05680 [Elusimicrobia ba... [more]
gi|1084920794|gb|OGR39396.1|1.663e-1027.54hypothetical protein A2X29_02735 [Elusimicrobia ba... [more]
gi|1085055916|gb|OGS56498.1|1.710e-1046.88ferritin [Elusimicrobia bacterium RIFOXYB2_FULL_62... [more]
gi|1026961057|ref|XP_016611150.1|3.772e-1039.13hypothetical protein SPPG_08997 [Spizellomyces pun... [more]
gi|504264222|ref|WP_014451324.1|5.929e-1027.43ferritin [Fervidobacterium pennivorans] >gi|383109... [more]
gi|1057305887|ref|WP_068667274.1|7.892e-1026.46ferritin [Thermococcus piezophilus] >gi|1029173242... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10005rna10005Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications