EWM20702.1, cds9971 (CDS) Nannochloropsis gaditana

Overview
NameEWM20702.1
Unique Namecds9971
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:102136..102165 +
Alignment locationKK037259.1:102588..102738 +
Alignment locationKK037259.1:102824..103020 +
Alignment locationKK037259.1:103202..103277 +
Alignment locationKK037259.1:103443..103628 +
Alignment locationKK037259.1:103817..103838 +
Alignment locationKK037259.1:103885..103903 +

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Properties
Property NameValue
Protein idEWM20702.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101314g1.2635.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:102136..102165 +
KK037259.1supercontigKK037259.1:102588..102738 +
KK037259.1supercontigKK037259.1:102824..103020 +
KK037259.1supercontigKK037259.1:103202..103277 +
KK037259.1supercontigKK037259.1:103443..103628 +
KK037259.1supercontigKK037259.1:103817..103838 +
KK037259.1supercontigKK037259.1:103885..103903 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM20702.1 vs. NCBI_GenBank
Match: gi|585100532|gb|EWM20702.1| (hypothetical protein Naga_101314g1 [Nannochloropsis gaditana])

HSP 1 Score: 435.647 bits (1119), Expect = 4.255e-154
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 
Query:    1 MVSFESHFFEDFTIDPQRINTEASPGMMVSSSVFRSSHRRQGRRHMLARPSFACMFLLLAVVLLLCPVIVGAAEEAAPPAVVEAEKPDAGEKKDKPAAAPEASKPEDEAPKDAPAPAEPAKEEAAKAEADVQPPPAKVEAPSAEVPEQKAPAPEQAAAAKEVTELKAALEASQKETQAAAEASKKQLEEKEAQKSATETKLKELEGQHAGLITERDALKEQRRSRP 226
            MVSFESHFFEDFTIDPQRINTEASPGMMVSSSVFRSSHRRQGRRHMLARPSFACMFLLLAVVLLLCPVIVGAAEEAAPPAVVEAEKPDAGEKKDKPAAAPEASKPEDEAPKDAPAPAEPAKEEAAKAEADVQPPPAKVEAPSAEVPEQKAPAPEQAAAAKEVTELKAALEASQKETQAAAEASKKQLEEKEAQKSATETKLKELEGQHAGLITERDALKEQRRSRP
Sbjct:    1 MVSFESHFFEDFTIDPQRINTEASPGMMVSSSVFRSSHRRQGRRHMLARPSFACMFLLLAVVLLLCPVIVGAAEEAAPPAVVEAEKPDAGEKKDKPAAAPEASKPEDEAPKDAPAPAEPAKEEAAKAEADVQPPPAKVEAPSAEVPEQKAPAPEQAAAAKEVTELKAALEASQKETQAAAEASKKQLEEKEAQKSATETKLKELEGQHAGLITERDALKEQRRSRP 226
The following BLAST results are available for this feature:
BLAST of EWM20702.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100532|gb|EWM20702.1|4.255e-154100.00hypothetical protein Naga_101314g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10002rna10002Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications