EWM20703.1, cds9970 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|585100534|gb|EWM20703.1| (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 466.077 bits (1198), Expect = 3.470e-166 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 Query: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV 227 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV Sbjct: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV 227
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|585101548|gb|EWM21361.1| (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 77.7962 bits (190), Expect = 4.646e-13 Identity = 60/222 (27.03%), Postives = 96/222 (43.24%), Query Frame = 0 Query: 9 FTRVHRE---GDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGV--------VPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLG 219 F +V RE +DR +VI+ + IWQ++SI+ DV+ G+ + + + + D+ AL R RA+E L + V M D + VP + + G L+Q TN +D++V GA + +T LL+A L++PDDRS +F +LF R L+K F G +RL + V++G Sbjct: 3 FYKVRREFGSEGIDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVE---------------DNASVALGPTRSRRKGRAQEEVAILVRLVDEVR-TMPDYKILARTQHESVPTFLGLLAG-ERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKVG 207
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|553188281|ref|XP_005854767.1| (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >gi|553191620|ref|XP_005855415.1| hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >gi|422293646|gb|EKU20946.1| hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >gi|422294294|gb|EKU21594.1| hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 61.6178 bits (148), Expect = 1.136e-7 Identity = 53/227 (23.35%), Postives = 102/227 (44.93%), Query Frame = 0 Query: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLA-----LLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGV---VPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLG 219 A+ +LQAF R+ G + R ++ L +W+ +S +A ADV+ G+ + + ++ + +L L P P + + Q +++ AR + LKE+ + ++G L+M + + N + + A L + L++K I LMA L +P+DR + + +F E+ + K++D G ++L LH A ++LG Sbjct: 104 FAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEEPMRMLQDP--PSHVRYQRLQQYQSSAASQARTQQ------------LKETEIFKRENEGTRASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKT-MFFKMYDKDGSVKLCLHTARTIRLG 315 The following BLAST results are available for this feature:
BLAST of EWM20703.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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