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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101787g1.9941.mrna |
| Orig protein id | gnl|cribi|Naga_101787g1.9941 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:99374..100913 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10001 ID=rna10001|Name=rna10001|organism=Nannochloropsis gaditana|type=mRNA|length=816bp
ACAGGACGTACGCTTACCTCTTGGACTTTTTGAGACGAGGCTTGTGGCTT
GTACTGTAGTTGTTGGGATTGGGAAGCCGTGACGGAATTTTTCCGAGCAG
TCCCCCGACATCTGTCCTTGTTCCTCCACTGCCCGGAGGAGAAAGGCGCA
CAGTGGACTAGAAAACGGGGAAGGAAAAAAAAATTGTAAAGCAAGCACCC
TGAAATTTTCCGACAGCGGGGCGTCTTTTGGAAAAATCACGCGGTCGCAC
CTTACTTGTCGGAATCATGGCAGAATCAAACCAGAGGTGATGCACTGTCC
CTGCCTTTATTGTCCGCGTGCCCTTCAAAAATCCACGACATAGGCGCAAG
TAGACAGACACGTTGACATAGCCAGGAAATAGAGGGTGGCCGCGAAAATG
GGTGGGGAAGAGGGCGGTAGGAGGTAACGCGGACAAGGCGGATGGAGAGC
GGCGACAGCAGTCAGGTCGAGCCCTCGACCGATGCCAGGACGACAAGGGA
AGCCACAAAAGAAGGTCTTGCGGGCCAAAAAGGACCACGGAAGCGCGAAG
GAAGGGGCGGCATAGGTATTGCGGACCCCGTGAGCGCAAATGGGTGGCTG
GCGAATGAGGAGGTGGAGGTGGATGAGGGTGGAGGGGAGCCAGGTGGGAA
AAGGGAGGTAAACACCTGGGCCGAAGGGAGGGAGGTGGACATGAAACAAG
CGGATGGTACGGTGGAATTGCAGAGGAGGAAGCGGGGCAGAAGACGCGAC
GGAGGGGAGGACTCAGACGGGGGTACCAGAGAGGCAGGAGTCGCCCTCCC
CCGTCGTGACCCGAGT back to topprotein sequence of rna10001 >rna10001-protein ID=rna10001-protein|Name=rna10001|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIA
ELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGS
QSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLH
EHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLF
DAQGQMRLYLHEASQVQLGLVCVYGLV back to topmRNA from alignment at KK037259.1:99374..100913+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10001 ID=rna10001|Name=rna10001|organism=Nannochloropsis gaditana|type=mRNA|length=1540bp|location=Sequence derived from alignment at KK037259.1:99374..100913+ (Nannochloropsis gaditana)
agctgTTTCCGTCGCTCCTGGCCTTGCCGGCCTCAGCTCTCTCGGCGCAC
CCCGGCGACCTCCACGCCGTTCCCTGCGCCTCACCTCCTCGACACCGTCT
TCCAACGGGTCGATTTACCCGCCATGGCCCAGGAATTCCTCCAGGCATTC
ACGCGCGTGCACCGAGAGGGAGACCTAGACCGAGCCAAAGTCATTCAGAT
GCTgtcagtccctcccttccttcctcccccgcctccctccctcccttcct
ccctccctccttcccttcctcccttcccctccacccatgcgtcctttcct
cccaccctttttAACAGCAACATTTGGCAGAACATGTCCATCATCGCGGC
AGCCGACGTTAGCTGCGGCCTAACCCGCGCCATCgccgagctcctccacc
tcccttccaccgacctcgccctccttccccccttcctcccccccttcctc
gcctcccgggccttccAAACCCAGCGGGCGGCCCTGATCCTTCATGCCCG
AGAGCGGGCCGCgcgggccaaggaggggaaagggagtcAAAGTCTGTTGA
AGGAGAGCGTGGCGTGGATGATGGCAGACGATGGGGTGGTGCCGCTCCTG
ATGATGTGTATGGACGGACCGCACATGCTCCTGCAGACCACGAACCGCCC
GTACGACAAGCTCGTCGCCGGCGCCCAGTCCTTGCACGAGCACTGCCTCC
GAAAGAAAACCATCCAGGTGGGTACAGAGGAAGGGCcaagctacccggat
gttgCGAAAATGGCGTTTTGGGGAAAGACTTGTTTCTCTCCGACGCCGGT
TGGGACCTGTCGTCATTCGAGGaacggcgggggagggaaggaagagagag
ggtgggCCAAGGATAGGAAAGCACGGGCAAATGTGTGCGGGCAGGCTCTC
GTTTCTCTTTGGGGgtcattcctcccttccctctgggGGCATCCGGATAG
TTTGGGCGGTCTCTTTCTCGGGGTGTGCGTGGGAATGGTGGACCTGTTTA
CCCCCTCTTAACTCTCTTGtcgatcctcctccaccatcctccatcctttt
tggaaaggaaggtggggaaggccgtttccctccctcctcctattcccccc
cccggcgtcGCAAGACTCGTCTCGAGCCTCAATCTgccattcccccccgc
ctttctccttaTCTCCCTCTATTCAAACCTCTGCTTATGTATCGTAGAGT
AGAAAAGAAAaccaaccctcccttcttccctccctccctcccttcccccc
tcagTTCCTCCTGATGGCTTCCCTGATCAGCCCTGACGACCGCAGCCTCT
GGTTCCGGTGCCTtgcccactccctcttcaccAGCGAACGATACCGACac
gtcgccgtcctcgtcaaGCTCTTTGACGCGCAGGGCCAGATGCGTCTGTA
TCTGCACGAGGCCTCGCAGGTCCAGgtgcagggggaggtgagtCTTCACA
AAGCGAAAGGGGGGGTTTCCCCGAGTTTTTTTCGggtttttttggggggg
gatgCAGCTGGGGTTGGTCTGTGTGTATGGTCTTGTGTGA back to topCoding sequence (CDS) from alignment at KK037259.1:99374..100913+ >rna10001 ID=rna10001|Name=rna10001|organism=Nannochloropsis gaditana|type=CDS|length=2736bp|location=Sequence derived from alignment at KK037259.1:99374..100913+ (Nannochloropsis gaditana)
ATGGCCCAGGAATTCCTCCAGGCATTCACGCGCGTGCACCGAGAGGGAGA
CCTAGACCGAGCCAAAGTCATTCAGATGCTCAACATTTGGCAGAACATGT
CCATCATCGCGGCAGCCGACGTTAGCTGCGGCCTAACCCGCGCCATCgcc
gagctcctccacctcccttccaccgacctcgccctccttccccccttcct
cccccccttcctcgcctcccgggccttccAAACCCAGCGGGCGGCCCTGA
TCCTTCATGCCCGAGAGCGGGCCGCgcgggccaaggaggggaaagggagt
cAAAGTCTGTTGAAGGAGAGCGTGGCGTGGATGATGGCAGACGATGGGGT
GGTGCCGCTCCTGATGATGTGTATGGACGGACCGCACATGCTCCTGCAGA
CCACGAACCGCCCGTACGACAAGCTCGTCGCCGGCGCCCAGTCCTTGCAC
GAGCACTGCCTCCGAAAGAAAACCATCCAGTTCCTCCTGATGGCTTCCCT
GATCAGCCCTGACGACCGCAGCCTCTGGTTCCGGTGCCTtgcccactccc
tcttcaccAGCGAACGATACCGACacgtcgccgtcctcgtcaaGCTCTTT
GACGCGCAGGGCCAGATGCGTCTGTATCTGCACGAGGCCTCGCAGGTCCA
GCTGGGGTTGGTCTGTGTGTATGGTCTTGTGTGAATGGCCCAGGAATTCC
TCCAGGCATTCACGCGCGTGCACCGAGAGGGAGACCTAGACCGAGCCAAA
GTCATTCAGATGCTCAACATTTGGCAGAACATGTCCATCATCGCGGCAGC
CGACGTTAGCTGCGGCCTAACCCGCGCCATCgccgagctcctccacctcc
cttccaccgacctcgccctccttccccccttcctcccccccttcctcgcc
tcccgggccttccAAACCCAGCGGGCGGCCCTGATCCTTCATGCCCGAGA
GCGGGCCGCgcgggccaaggaggggaaagggagtcAAAGTCTGTTGAAGG
AGAGCGTGGCGTGGATGATGGCAGACGATGGGGTGGTGCCGCTCCTGATG
ATGTGTATGGACGGACCGCACATGCTCCTGCAGACCACGAACCGCCCGTA
CGACAAGCTCGTCGCCGGCGCCCAGTCCTTGCACGAGCACTGCCTCCGAA
AGAAAACCATCCAGTTCCTCCTGATGGCTTCCCTGATCAGCCCTGACGAC
CGCAGCCTCTGGTTCCGGTGCCTtgcccactccctcttcaccAGCGAACG
ATACCGACacgtcgccgtcctcgtcaaGCTCTTTGACGCGCAGGGCCAGA
TGCGTCTGTATCTGCACGAGGCCTCGCAGGTCCAGCTGGGGTTGGTCTGT
GTGTATGGTCTTGTGTGAATGGCCCAGGAATTCCTCCAGGCATTCACGCG
CGTGCACCGAGAGGGAGACCTAGACCGAGCCAAAGTCATTCAGATGCTCA
ACATTTGGCAGAACATGTCCATCATCGCGGCAGCCGACGTTAGCTGCGGC
CTAACCCGCGCCATCgccgagctcctccacctcccttccaccgacctcgc
cctccttccccccttcctcccccccttcctcgcctcccgggccttccAAA
CCCAGCGGGCGGCCCTGATCCTTCATGCCCGAGAGCGGGCCGCgcgggcc
aaggaggggaaagggagtcAAAGTCTGTTGAAGGAGAGCGTGGCGTGGAT
GATGGCAGACGATGGGGTGGTGCCGCTCCTGATGATGTGTATGGACGGAC
CGCACATGCTCCTGCAGACCACGAACCGCCCGTACGACAAGCTCGTCGCC
GGCGCCCAGTCCTTGCACGAGCACTGCCTCCGAAAGAAAACCATCCAGTT
CCTCCTGATGGCTTCCCTGATCAGCCCTGACGACCGCAGCCTCTGGTTCC
GGTGCCTtgcccactccctcttcaccAGCGAACGATACCGACacgtcgcc
gtcctcgtcaaGCTCTTTGACGCGCAGGGCCAGATGCGTCTGTATCTGCA
CGAGGCCTCGCAGGTCCAGCTGGGGTTGGTCTGTGTGTATGGTCTTGTGT
GAATGGCCCAGGAATTCCTCCAGGCATTCACGCGCGTGCACCGAGAGGGA
GACCTAGACCGAGCCAAAGTCATTCAGATGCTCAACATTTGGCAGAACAT
GTCCATCATCGCGGCAGCCGACGTTAGCTGCGGCCTAACCCGCGCCATCg
ccgagctcctccacctcccttccaccgacctcgccctccttccccccttc
ctcccccccttcctcgcctcccgggccttccAAACCCAGCGGGCGGCCCT
GATCCTTCATGCCCGAGAGCGGGCCGCgcgggccaaggaggggaaaggga
gtcAAAGTCTGTTGAAGGAGAGCGTGGCGTGGATGATGGCAGACGATGGG
GTGGTGCCGCTCCTGATGATGTGTATGGACGGACCGCACATGCTCCTGCA
GACCACGAACCGCCCGTACGACAAGCTCGTCGCCGGCGCCCAGTCCTTGC
ACGAGCACTGCCTCCGAAAGAAAACCATCCAGTTCCTCCTGATGGCTTCC
CTGATCAGCCCTGACGACCGCAGCCTCTGGTTCCGGTGCCTtgcccactc
cctcttcaccAGCGAACGATACCGACacgtcgccgtcctcgtcaaGCTCT
TTGACGCGCAGGGCCAGATGCGTCTGTATCTGCACGAGGCCTCGCAGGTC
CAGCTGGGGTTGGTCTGTGTGTATGGTCTTGTGTGA back to top
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